mRNA_H-elongata_contig159361.3828.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig159361.3828.1 vs. uniprot
Match: D7FR39_ECTSI (Mx1, Mx-like dynamin-related GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR39_ECTSI) HSP 1 Score: 157 bits (397), Expect = 1.120e-42 Identity = 78/88 (88.64%), Postives = 84/88 (95.45%), Query Frame = 1
Query: 1 LPRYLEQERTIILAVVPSNQDVATVDILERAKTVDPEGDRTIGVLTKPDLIGPGNEEETAAVLKNIRKPLKLGYVMVKCRSQRDIEQG 264
+ R+LEQERTIILAVVP+NQDVA VDILERAK VDPEGDRTIGVLTKPDLIGPGNE+E AAVLKN+RKPLKLGYVMVKCRSQRDI+QG
Sbjct: 206 IQRFLEQERTIILAVVPANQDVAPVDILERAKMVDPEGDRTIGVLTKPDLIGPGNEDEAAAVLKNVRKPLKLGYVMVKCRSQRDIDQG 293
BLAST of mRNA_H-elongata_contig159361.3828.1 vs. uniprot
Match: A0A836CJ76_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ76_9STRA) HSP 1 Score: 149 bits (375), Expect = 6.880e-40 Identity = 75/86 (87.21%), Postives = 79/86 (91.86%), Query Frame = 1
Query: 7 RYLEQERTIILAVVPSNQDVATVDILERAKTVDPEGDRTIGVLTKPDLIGPGNEEETAAVLKNIRKPLKLGYVMVKCRSQRDIEQG 264
RYL QERTIILAVVP+NQDVATVDILERAK VDPEGDRTIGVLTKPDLIGPGNE+E AVL+NIRKPLKLGYVM+KCRSQ DI G
Sbjct: 180 RYLIQERTIILAVVPANQDVATVDILERAKRVDPEGDRTIGVLTKPDLIGPGNEDEVVAVLRNIRKPLKLGYVMLKCRSQADINAG 265
BLAST of mRNA_H-elongata_contig159361.3828.1 vs. uniprot
Match: A0A7S2D251_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D251_9STRA) HSP 1 Score: 135 bits (339), Expect = 3.510e-39 Identity = 66/85 (77.65%), Postives = 77/85 (90.59%), Query Frame = 1
Query: 10 YLEQERTIILAVVPSNQDVATVDILERAKTVDPEGDRTIGVLTKPDLIGPGNEEETAAVLKNIRKPLKLGYVMVKCRSQRDIEQG 264
YL QERTIILAVVP+NQD+ATVDILERA++VDP G RT+GVLTK DLIGPG+E+E AVL+N RKP+KLGYVMVKCRSQ+DI+ G
Sbjct: 28 YLSQERTIILAVVPANQDIATVDILERARSVDPNGLRTLGVLTKADLIGPGSEDEVMAVLRNERKPIKLGYVMVKCRSQQDIDNG 112
BLAST of mRNA_H-elongata_contig159361.3828.1 vs. uniprot
Match: F0YHI1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHI1_AURAN) HSP 1 Score: 139 bits (350), Expect = 2.110e-36 Identity = 69/88 (78.41%), Postives = 77/88 (87.50%), Query Frame = 1
Query: 1 LPRYLEQERTIILAVVPSNQDVATVDILERAKTVDPEGDRTIGVLTKPDLIGPGNEEETAAVLKNIRKPLKLGYVMVKCRSQRDIEQG 264
+ YL Q+RTIILAV+P+NQD+ATVDILERA+ VDP G+RT+GVLTKPDLIGPGNEEE AAVLKNIRKPLKLGYVMVK RSQ I G
Sbjct: 167 IDEYLRQDRTIILAVIPANQDIATVDILERARLVDPTGERTLGVLTKPDLIGPGNEEEVAAVLKNIRKPLKLGYVMVKNRSQAQIRNG 254
BLAST of mRNA_H-elongata_contig159361.3828.1 vs. uniprot
Match: F0YGN9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGN9_AURAN) HSP 1 Score: 139 bits (349), Expect = 3.030e-36 Identity = 67/85 (78.82%), Postives = 77/85 (90.59%), Query Frame = 1
Query: 10 YLEQERTIILAVVPSNQDVATVDILERAKTVDPEGDRTIGVLTKPDLIGPGNEEETAAVLKNIRKPLKLGYVMVKCRSQRDIEQG 264
YL QERTIILAV+PSNQD+AT+DILERA+TVDP G+RTIGVLTKPDLIGPGNEEE AVL N+RKPL+LGY+MVK RSQ ++QG
Sbjct: 212 YLRQERTIILAVIPSNQDIATIDILERAQTVDPGGERTIGVLTKPDLIGPGNEEEVMAVLNNLRKPLRLGYIMVKNRSQAQVKQG 296
BLAST of mRNA_H-elongata_contig159361.3828.1 vs. uniprot
Match: F0YCI2_AURAN (Dynamin-type G domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCI2_AURAN) HSP 1 Score: 131 bits (330), Expect = 7.240e-36 Identity = 66/89 (74.16%), Postives = 77/89 (86.52%), Query Frame = 1
Query: 10 YLEQERTIILAVVPSNQDVATVDILERAKTVDPEGDRTIGVLTKPDLIGPGNEEETAAVLKNIRKPLKLGYVMVKCRSQRDIEQGKLST 276
YL+QERTI+LA+VPSNQDVATVDILERA TVDP G+RTIGVLTKPDLIG G E+E AVLKN RKPLKLGY+MVK RS ++QG +++
Sbjct: 172 YLKQERTIVLAIVPSNQDVATVDILERALTVDPTGERTIGVLTKPDLIGEGAEDEVVAVLKNERKPLKLGYIMVKNRSAMQLKQGAINS 260
BLAST of mRNA_H-elongata_contig159361.3828.1 vs. uniprot
Match: A0A7S3Y691_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y691_HETAK) HSP 1 Score: 130 bits (326), Expect = 7.550e-36 Identity = 63/91 (69.23%), Postives = 76/91 (83.52%), Query Frame = 1
Query: 1 LPRYLEQERTIILAVVPSNQDVATVDILERAKTVDPEGDRTIGVLTKPDLIGPGNEEETAAVLKNIRKPLKLGYVMVKCRSQRDIEQGKLS 273
+ +L QERT+ILAVVP+NQD+ATVDILERA VDPEG RTIGVLTKPDL+G GNE E AV KN RKPL+LGYVMV+CR+Q+++ +G S
Sbjct: 65 IEHFLRQERTVILAVVPANQDIATVDILERAAEVDPEGRRTIGVLTKPDLVGAGNEGEVLAVAKNERKPLRLGYVMVRCRNQKELNEGVTS 155
BLAST of mRNA_H-elongata_contig159361.3828.1 vs. uniprot
Match: A0A7S2WV62_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WV62_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.380e-35 Identity = 67/85 (78.82%), Postives = 76/85 (89.41%), Query Frame = 1
Query: 10 YLEQERTIILAVVPSNQDVATVDILERAKTVDPEGDRTIGVLTKPDLIGPGNEEETAAVLKNIRKPLKLGYVMVKCRSQRDIEQG 264
YL QERTIILAV+P+NQD+ATVDILERA TVDP G RTIGVLTKPDLIGPGNE+E AVL N+RKPLKLGYVMVK RSQ+ +++G
Sbjct: 164 YLSQERTIILAVIPANQDIATVDILERASTVDPNGVRTIGVLTKPDLIGPGNEDEVLAVLHNVRKPLKLGYVMVKNRSQKQLQEG 248
BLAST of mRNA_H-elongata_contig159361.3828.1 vs. uniprot
Match: A0A8J2SYS0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SYS0_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.910e-35 Identity = 64/85 (75.29%), Postives = 78/85 (91.76%), Query Frame = 1
Query: 10 YLEQERTIILAVVPSNQDVATVDILERAKTVDPEGDRTIGVLTKPDLIGPGNEEETAAVLKNIRKPLKLGYVMVKCRSQRDIEQG 264
YLE++RTIILA++P+NQD+AT+DILERA+ VDP G+RTIGVLTKPDLIGPGNE+E AVL+NIRKPLKLG+VMVK RSQ +E+G
Sbjct: 167 YLEEDRTIILAIIPANQDIATIDILERARIVDPAGERTIGVLTKPDLIGPGNEQEVVAVLRNIRKPLKLGFVMVKNRSQAQVEEG 251
BLAST of mRNA_H-elongata_contig159361.3828.1 vs. uniprot
Match: A0A7S3Y6A1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6A1_HETAK) HSP 1 Score: 130 bits (326), Expect = 1.110e-34 Identity = 63/91 (69.23%), Postives = 76/91 (83.52%), Query Frame = 1
Query: 1 LPRYLEQERTIILAVVPSNQDVATVDILERAKTVDPEGDRTIGVLTKPDLIGPGNEEETAAVLKNIRKPLKLGYVMVKCRSQRDIEQGKLS 273
+ +L QERT+ILAVVP+NQD+ATVDILERA VDPEG RTIGVLTKPDL+G GNE E AV KN RKPL+LGYVMV+CR+Q+++ +G S
Sbjct: 182 IEHFLRQERTVILAVVPANQDIATVDILERAAEVDPEGRRTIGVLTKPDLVGAGNEGEVLAVAKNERKPLRLGYVMVRCRNQKELNEGVTS 272 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig159361.3828.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig159361.3828.1 >prot_H-elongata_contig159361.3828.1 ID=prot_H-elongata_contig159361.3828.1|Name=mRNA_H-elongata_contig159361.3828.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=92bp LPRYLEQERTIILAVVPSNQDVATVDILERAKTVDPEGDRTIGVLTKPDLback to top mRNA from alignment at H-elongata_contig159361:336..1231+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig159361.3828.1 ID=mRNA_H-elongata_contig159361.3828.1|Name=mRNA_H-elongata_contig159361.3828.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=896bp|location=Sequence derived from alignment at H-elongata_contig159361:336..1231+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig159361:336..1231+ >mRNA_H-elongata_contig159361.3828.1 ID=mRNA_H-elongata_contig159361.3828.1|Name=mRNA_H-elongata_contig159361.3828.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=552bp|location=Sequence derived from alignment at H-elongata_contig159361:336..1231+ (Himanthalia elongata Himel1 dioecious)back to top |