prot_H-elongata_contig159296.3825.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig159296.3825.1
Unique Nameprot_H-elongata_contig159296.3825.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length117
Homology
BLAST of mRNA_H-elongata_contig159296.3825.1 vs. uniprot
Match: D7G3J5_ECTSI (GDP-mannose 6-dehydrogenase n=6 Tax=Phaeophyceae TaxID=2870 RepID=D7G3J5_ECTSI)

HSP 1 Score: 218 bits (555), Expect = 9.860e-69
Identity = 104/115 (90.43%), Postives = 112/115 (97.39%), Query Frame = 0
Query:    1 SYANGLKISFANCIYGLANELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINQWISSPEAKTMRVTLDESPNWVSPESLV 115
            +YANGLKISFANCIYGLA+ELDP+IDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKIN+WISS +AK MRV LDESPNWVSP++L+
Sbjct:  215 NYANGLKISFANCIYGLAHELDPSIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWISSAKAKNMRVELDESPNWVSPDALM 329          
BLAST of mRNA_H-elongata_contig159296.3825.1 vs. uniprot
Match: A0A6H5KTU6_9PHAE (UDPG_MGDP_dh domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTU6_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 3.780e-64
Identity = 98/114 (85.96%), Postives = 107/114 (93.86%), Query Frame = 0
Query:    1 SYANGLKISFANCIYGLANELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINQWISSPEAKTMRVTLDESPNWVSPESL 114
            +YANGLKISFANCIYGLA+ELDP+IDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKIN+WI++    +++V LDESPNWVSP  L
Sbjct:  128 NYANGLKISFANCIYGLAHELDPSIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWITN--TPSLKVELDESPNWVSPSEL 239          
BLAST of mRNA_H-elongata_contig159296.3825.1 vs. uniprot
Match: D7FM80_ECTSI (GDP-mannose 6-dehydrogenase n=3 Tax=Phaeophyceae TaxID=2870 RepID=D7FM80_ECTSI)

HSP 1 Score: 201 bits (510), Expect = 3.930e-62
Identity = 97/114 (85.09%), Postives = 106/114 (92.98%), Query Frame = 0
Query:    1 SYANGLKISFANCIYGLANELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINQWISSPEAKTMRVTLDESPNWVSPESL 114
            +YANGLKISFANCIYGLA+ELDP+IDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKIN+WI++    +++V L ESPNWVSP  L
Sbjct:  202 NYANGLKISFANCIYGLAHELDPSIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINEWITN--TPSLKVELTESPNWVSPSEL 313          
BLAST of mRNA_H-elongata_contig159296.3825.1 vs. uniprot
Match: A0A1Q9RSG0_9PSEU (UDP-glucose 6-dehydrogenase n=1 Tax=Pseudonocardia sp. CNS-004 TaxID=1904967 RepID=A0A1Q9RSG0_9PSEU)

HSP 1 Score: 57.0 bits (136), Expect = 3.980e-7
Identity = 32/89 (35.96%), Postives = 48/89 (53.93%), Query Frame = 0
Query:    4 NGLKISFANCIYGLANELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINQWISS 92
            N  KISF N ++ +A +L   +D   +   V+ +AE  ++ +YG+R GAPYGGVCLPKD       A    V    LS   ++N  + +
Sbjct:  200 NATKISFWNEMWLVAQKLG--VDLDPIAATVARSAEGSINPEYGIRGGAPYGGVCLPKDTQGFLGFADTVGVEMPLLSAVVEVNDRLQA 286          
BLAST of mRNA_H-elongata_contig159296.3825.1 vs. uniprot
Match: A0A561SYJ8_9PSEU (UDPglucose 6-dehydrogenase n=4 Tax=Pseudonocardia TaxID=1847 RepID=A0A561SYJ8_9PSEU)

HSP 1 Score: 56.6 bits (135), Expect = 5.400e-7
Identity = 32/88 (36.36%), Postives = 48/88 (54.55%), Query Frame = 0
Query:    4 NGLKISFANCIYGLANELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINQWIS 91
            N  KISF N ++ +A +L   +D   +   V+ +AE  ++ +YG+R GAPYGGVCLPKD       A    V    LS   ++N  ++
Sbjct:  192 NATKISFWNEMWLVAQKLG--LDLDPIAATVARSAEGSINPEYGIRGGAPYGGVCLPKDTQGFLGFADTVGVNMPLLSAVVEVNDRLA 277          
BLAST of mRNA_H-elongata_contig159296.3825.1 vs. uniprot
Match: A0A561SP55_9PSEU (UDPglucose 6-dehydrogenase n=2 Tax=Pseudonocardia TaxID=1847 RepID=A0A561SP55_9PSEU)

HSP 1 Score: 56.6 bits (135), Expect = 5.550e-7
Identity = 32/88 (36.36%), Postives = 48/88 (54.55%), Query Frame = 0
Query:    4 NGLKISFANCIYGLANELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINQWIS 91
            N  KISF N ++ +A +L   +D   +   V+ +AE  ++ +YG+R GAPYGGVCLPKD       A    V    LS   ++N  ++
Sbjct:  200 NATKISFWNEMWLVAQKLG--LDLDPIAATVARSAEGSINPEYGIRGGAPYGGVCLPKDTQGFLGFADTVGVDMPLLSAVVEVNDRLA 285          
BLAST of mRNA_H-elongata_contig159296.3825.1 vs. uniprot
Match: A0A1Q9RRD6_9PSEU (UDP-glucose 6-dehydrogenase n=4 Tax=Pseudonocardia TaxID=1847 RepID=A0A1Q9RRD6_9PSEU)

HSP 1 Score: 56.6 bits (135), Expect = 5.600e-7
Identity = 33/89 (37.08%), Postives = 49/89 (55.06%), Query Frame = 0
Query:    4 NGLKISFANCIYGLANELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINQWISS 92
            N  KISF N ++ +A +LD  +D   +   V+ +AE  ++ +YG+R GAPYGGVCLPKD       A    V    LS   + N  +++
Sbjct:  200 NATKISFWNEMWLVAQKLD--LDLDPIAATVARSAEGSINPEYGIRGGAPYGGVCLPKDTCGFLGFAAGIDVDMPLLSAVVETNDRLAA 286          
BLAST of mRNA_H-elongata_contig159296.3825.1 vs. uniprot
Match: A0A2S4XIC0_9ACTN (UDP-glucose 6-dehydrogenase n=5 Tax=Streptomyces TaxID=1883 RepID=A0A2S4XIC0_9ACTN)

HSP 1 Score: 55.8 bits (133), Expect = 9.770e-7
Identity = 33/87 (37.93%), Postives = 45/87 (51.72%), Query Frame = 0
Query:    4 NGLKISFANCIYGLANELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINQWI 90
            N  KISF N ++ +A  L   +D   +   V+ +AE   +  YG+R GAPYGGVCLPKD      LA   S+    L    K+N  +
Sbjct:  198 NATKISFWNEMWLVAQTLG--LDLDPIAQTVARSAEGSYNPLYGIRGGAPYGGVCLPKDTQGFLGLAESLSLDMPLLKAVVKVNDTL 282          
BLAST of mRNA_H-elongata_contig159296.3825.1 vs. uniprot
Match: UPI00099EE5ED (nucleotide sugar dehydrogenase n=1 Tax=Streptomyces graminilatus TaxID=1464070 RepID=UPI00099EE5ED)

HSP 1 Score: 55.8 bits (133), Expect = 9.770e-7
Identity = 31/88 (35.23%), Postives = 47/88 (53.41%), Query Frame = 0
Query:    4 NGLKISFANCIYGLANELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINQWIS 91
            N  KISF N ++ ++ EL   +D   +   V+ +AE  ++  YG+R GAPYGGVCLPKD      LA    +    L    ++N  ++
Sbjct:  198 NATKISFWNEMWLVSQELG--LDLDPIAQTVARSAEGSVNPLYGIRGGAPYGGVCLPKDTQGFLGLADSIGLHMPLLKAVVEVNDQLA 283          
BLAST of mRNA_H-elongata_contig159296.3825.1 vs. uniprot
Match: A0A543DLR3_9PSEU (UDPglucose 6-dehydrogenase n=2 Tax=Pseudonocardia kunmingensis TaxID=630975 RepID=A0A543DLR3_9PSEU)

HSP 1 Score: 55.8 bits (133), Expect = 1.040e-6
Identity = 32/89 (35.96%), Postives = 48/89 (53.93%), Query Frame = 0
Query:    4 NGLKISFANCIYGLANELDPTIDAQKVLYLVSSTAECFLSRKYGLRVGAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINQWISS 92
            N  KISF N ++ +A +L   +D   +   V+ +AE  ++ +YG+R GAPYGGVCLPKD       A    V    LS   + N  +++
Sbjct:  200 NATKISFWNEMWLVAQKLG--VDLDPIAATVARSAEGSINPQYGIRGGAPYGGVCLPKDTQGFLGFADNIGVDMPLLSAVVETNDRLAT 286          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig159296.3825.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3J5_ECTSI9.860e-6990.43GDP-mannose 6-dehydrogenase n=6 Tax=Phaeophyceae T... [more]
A0A6H5KTU6_9PHAE3.780e-6485.96UDPG_MGDP_dh domain-containing protein n=1 Tax=Ect... [more]
D7FM80_ECTSI3.930e-6285.09GDP-mannose 6-dehydrogenase n=3 Tax=Phaeophyceae T... [more]
A0A1Q9RSG0_9PSEU3.980e-735.96UDP-glucose 6-dehydrogenase n=1 Tax=Pseudonocardia... [more]
A0A561SYJ8_9PSEU5.400e-736.36UDPglucose 6-dehydrogenase n=4 Tax=Pseudonocardia ... [more]
A0A561SP55_9PSEU5.550e-736.36UDPglucose 6-dehydrogenase n=2 Tax=Pseudonocardia ... [more]
A0A1Q9RRD6_9PSEU5.600e-737.08UDP-glucose 6-dehydrogenase n=4 Tax=Pseudonocardia... [more]
A0A2S4XIC0_9ACTN9.770e-737.93UDP-glucose 6-dehydrogenase n=5 Tax=Streptomyces T... [more]
UPI00099EE5ED9.770e-735.23nucleotide sugar dehydrogenase n=1 Tax=Streptomyce... [more]
A0A543DLR3_9PSEU1.040e-635.96UDPglucose 6-dehydrogenase n=2 Tax=Pseudonocardia ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 6..107
e-value: 2.6E-9
score: 38.7
IPR014026UDP-glucose/GDP-mannose dehydrogenase, dimerisationPFAMPF00984UDPG_MGDP_dhcoord: 6..88
e-value: 3.8E-12
score: 46.3
IPR0089276-phosphogluconate dehydrogenase-like, C-terminal domain superfamilySUPERFAMILY481796-phosphogluconate dehydrogenase C-terminal domain-likecoord: 6..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig159296contigH-elongata_contig159296:57..407 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig159296.3825.1mRNA_H-elongata_contig159296.3825.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig159296 57..499 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig159296.3825.1 ID=prot_H-elongata_contig159296.3825.1|Name=mRNA_H-elongata_contig159296.3825.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=117bp
SYANGLKISFANCIYGLANELDPTIDAQKVLYLVSSTAECFLSRKYGLRV
GAPYGGVCLPKDVPELTSLAPEGSVFREFLSGTGKINQWISSPEAKTMRV
TLDESPNWVSPESLVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014026UDP-Glc/GDP-Man_DH_dimer
IPR0089276-PGluconate_DH-like_C_sf