prot_H-elongata_contig15917.3819.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15917.3819.1
Unique Nameprot_H-elongata_contig15917.3819.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length134
Homology
BLAST of mRNA_H-elongata_contig15917.3819.1 vs. uniprot
Match: A0A6H5L9W0_9PHAE (HELP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9W0_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 2.050e-62
Identity = 103/141 (73.05%), Postives = 116/141 (82.27%), Query Frame = 0
Query:    2 TAPEIRTRLEAVHGCRAGDVRGCVWYNYEQGIVYPAAALGVIYDPRTGQQSYHTGHSSDIISLAVSSCRRFVASGDAADPPQVHVWDALSL----------ELARLLPSLHSVGVALLAFSQDGHWLASVGHDLEHTVAVY 132
            TAPEIRTRL+AVHGCRA D+RGCVWYN+E+GIVYP AAL VIYDPRTG+QSYH GH  D+ISL VSSCRRF ASGDAADPP+VHVWDA++           E + LLPS H VGVALLAFS +GHWLAS+GHD EHT+AVY
Sbjct:  549 TAPEIRTRLDAVHGCRAEDLRGCVWYNHEEGIVYPVAALCVIYDPRTGRQSYHDGHLGDVISLTVSSCRRFAASGDAADPPRVHVWDAVTGAGVVCGAAGGETSGLLPSFHKVGVALLAFSCNGHWLASMGHDPEHTLAVY 689          
BLAST of mRNA_H-elongata_contig15917.3819.1 vs. uniprot
Match: D7FR21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR21_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 7.430e-62
Identity = 103/141 (73.05%), Postives = 115/141 (81.56%), Query Frame = 0
Query:    2 TAPEIRTRLEAVHGCRAGDVRGCVWYNYEQGIVYPAAALGVIYDPRTGQQSYHTGHSSDIISLAVSSCRRFVASGDAADPPQVHVWDALSL----------ELARLLPSLHSVGVALLAFSQDGHWLASVGHDLEHTVAVY 132
            TAPE+RTRL+AVHGCRA D+RGCVWYN+E+GIVYP AAL VIYDPRTG+QSYH  H  D+ISL VSSCRRF ASGDAADPP VHVWDA++           E + LLPSLH VGVALLAFS DGHWLAS+GHD EHT+AVY
Sbjct: 1863 TAPELRTRLDAVHGCRAEDLRGCVWYNHEEGIVYPVAALCVIYDPRTGRQSYHESHLGDVISLTVSSCRRFAASGDAADPPLVHVWDAVTGAGVVCGGAGGETSGLLPSLHRVGVALLAFSCDGHWLASMGHDPEHTLAVY 2003          
BLAST of mRNA_H-elongata_contig15917.3819.1 vs. uniprot
Match: A0A7S2FNZ1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FNZ1_9STRA)

HSP 1 Score: 129 bits (324), Expect = 4.120e-32
Identity = 60/131 (45.80%), Postives = 85/131 (64.89%), Query Frame = 0
Query:    4 PEIRTRLEAVHGCRAGDVRGCVWYNYEQGIVYPAAALGVIYDPRTGQQSYHTGHSSDIISLAVSSCRRFVASGDAADPPQVHVWDALSLELARLLPSLHSV--GVALLAFSQDGHWLASVGHDLEHTVAVY 132
            P +   LE  +G R+ DVRGC+ YN    +++P+AA+GV+YDP T  QS+H GH  D+IS+AV+      A+GD+   PQV VWDA++ +   +LP +     G++ LAFS+DG W ASVG D  HTVA +
Sbjct:  286 PNVTLELEHAYGQRSADVRGCLLYNANGSVLFPSAAVGVVYDPATNAQSFHIGHRGDVISMAVTDNGLVAATGDSHAQPQVRVWDAMTGQTLAVLPRVAQQRRGISALAFSRDGKWCASVGQDTHHTVAAF 416          
BLAST of mRNA_H-elongata_contig15917.3819.1 vs. uniprot
Match: A0A067D8Y7_SAPPC (EF-hand domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D8Y7_SAPPC)

HSP 1 Score: 119 bits (299), Expect = 1.010e-28
Identity = 62/131 (47.33%), Postives = 85/131 (64.89%), Query Frame = 0
Query:    3 APEIRTRLEAVHGCRAGDVRGCVWYNYEQGIVYPAAALGVIYDPRTGQQSYHTGHSSDIISLAVSSCRRFVASGDAADPPQVHVWDALSLELARLLPSLHSVGVALLAFSQDGHWLASVGHDLEHTVAVYK 133
            AP+I+ RLE V+G +A   R  + YN +  IVY AAA+G+IYD  T  Q +H GH+ DI+SLA+SS  RFVASG+    P + VWDA S  L   L   H+ GV  LAF+ D   +ASVG D +H++A+++
Sbjct: 1689 APDIQLRLEWVYGYQADLARNNLRYNADGQIVYHAAAVGIIYDRPTNTQKHHVGHNDDILSLAISSSGRFVASGERGKKPSIRVWDARSGALLSELKGFHARGVLSLAFALDEKTIASVGDDDDHSLAIWE 1819          
BLAST of mRNA_H-elongata_contig15917.3819.1 vs. uniprot
Match: A0A7S4KLV8_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KLV8_GUITH)

HSP 1 Score: 102 bits (255), Expect = 7.450e-23
Identity = 50/130 (38.46%), Postives = 79/130 (60.77%), Query Frame = 0
Query:    3 APEIRTRLEAVHGCRAGDVRGCVWYNYEQGIVYPAAALGVIYDPRTGQQSYHTGHSSDIISLAVSSCRRFVASGDAADPPQVHVWDALSLELARLLPSLHSVGVALLAFSQDGHWLASVGHDLEHTVAVY 132
            AP    +LE V+G R  D R  + YN E  +VY   A+GV+Y      Q +++GH+ D+ISLA+   +  VASG     P + VW ++S++    L   H +GVA ++F++DG  LASVG D++H++A++
Sbjct:   18 APYNCLQLEHVYGYRGHDCRNNLMYNEEGNLVYMVGAVGVVYRKEGHMQVFYSGHTDDVISLAMHPDKVLVASGQVGKSPVILVWSSVSMQTLSTLRGFHELGVAAMSFNKDGTKLASVGLDVDHSIAIW 147          
BLAST of mRNA_H-elongata_contig15917.3819.1 vs. uniprot
Match: A0A7S0VVP2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VVP2_9CRYP)

HSP 1 Score: 95.9 bits (237), Expect = 1.380e-22
Identity = 47/130 (36.15%), Postives = 78/130 (60.00%), Query Frame = 0
Query:    3 APEIRTRLEAVHGCRAGDVRGCVWYNYEQGIVYPAAALGVIYDPRTGQQSYHTGHSSDIISLAVSSCRRFVASGDAADPPQVHVWDALSLELARLLPSLHSVGVALLAFSQDGHWLASVGHDLEHTVAVY 132
            AP    ++E V+G R  D R  + Y  +  +VY  AA+ V+YD  +  Q+++  H+ D+IS+A+   +  +A+G     P + VW A +++    L   H +GVA +AFS+DG  +ASVG DL+H++AV+
Sbjct:    3 APYNVLQMEHVYGFRGHDCRNNLMYTGKGKMVYMVAAICVVYDKSSHFQTFYNAHTDDVISIAMHPDQETIATGQVGKTPIIQVWSATTMQTLVTLRGFHEMGVASVAFSKDGSKIASVGLDLDHSIAVW 132          
BLAST of mRNA_H-elongata_contig15917.3819.1 vs. uniprot
Match: A0A6P8IWD2_ACTTE (echinoderm microtubule-associated protein-like 6 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IWD2_ACTTE)

HSP 1 Score: 101 bits (252), Expect = 2.160e-22
Identity = 50/123 (40.65%), Postives = 70/123 (56.91%), Query Frame = 0
Query:   10 LEAVHGCRAGDVRGCVWYNYEQGIVYPAAALGVIYDPRTGQQSYHTGHSSDIISLAVSSCRRFVASGDAADPPQVHVWDALSLELARLLPSLHSVGVALLAFSQDGHWLASVGHDLEHTVAVY 132
            L+ V G R  D R  V+Y     IVY  AALG++Y     +Q ++TGH+ D++ LA+   + F+A+G     P +HVWDA  +E   +L   HS GV  + FS DG  LASVG D  H + V+
Sbjct:  684 LDFVFGYRGYDCRNNVFYTQTGEIVYHVAALGIVYSRDKHKQRFYTGHTDDVLCLAIHPAKDFIATGQVGRDPAIHVWDAEKMETLSILKGQHSRGVCAVDFSGDGRKLASVGLDDNHVIVVW 806          
BLAST of mRNA_H-elongata_contig15917.3819.1 vs. uniprot
Match: J9I4R1_9SPIT (HELP domain containing protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9I4R1_9SPIT)

HSP 1 Score: 100 bits (250), Expect = 4.040e-22
Identity = 47/130 (36.15%), Postives = 75/130 (57.69%), Query Frame = 0
Query:    3 APEIRTRLEAVHGCRAGDVRGCVWYNYEQGIVYPAAALGVIYDPRTGQQSYHTGHSSDIISLAVSSCRRFVASGDAADPPQVHVWDALSLELARLLPSLHSVGVALLAFSQDGHWLASVGHDLEHTVAVY 132
            AP+   +LE ++G R  D R  + YN++  +VY AA +G+++DPRT  Q +   H+ DI  LAV    R+ A+G     P + VWD  +++    L  +   G+  +AFS DG +LA+   D +HT+A+Y
Sbjct:  281 APDANLKLEHIYGYRCHDARNNLKYNHQGNLVYHAAGVGIVHDPRTNTQKFFFEHNDDIHCLAVDPSGRYAATGQIGPKPWLCVWDTETMQCVTRLQGVLLKGIKCVAFSPDGKYLAASAFDEDHTIAIY 410          
BLAST of mRNA_H-elongata_contig15917.3819.1 vs. uniprot
Match: C1EGF3_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EGF3_MICCC)

HSP 1 Score: 99.8 bits (247), Expect = 1.010e-21
Identity = 52/130 (40.00%), Postives = 74/130 (56.92%), Query Frame = 0
Query:    4 PEIRTRLEAVHGCRAGDVRGCVWYNYEQGIVYPAAALGVIYDPRTGQQSYHTGHSSDIISLAVSSCRRFVASGDAADPPQVHVWDALSLELARLLPSLHSVGVALLAFSQDGHWLASVGHDLEHTVAVYK 133
            P+   +LE VHG RA D R  + Y+ +  + Y AA +G   + +T +Q++   H  DI  L +   RR+VA+G     P +HVW A   +    +   H+  V LLAFS DG +LASVG D EHTVAV++
Sbjct:  100 PDDTLKLEFVHGYRAHDCRSNLGYSDDGKLCYHAAGVGCAMNTQTRKQNFFDLHDDDITCLVMHPSRRYVATGQVGASPAIHVWRASDGQRVASIRGAHNASVLLLAFSADGRYLASVGADPEHTVAVHE 229          
BLAST of mRNA_H-elongata_contig15917.3819.1 vs. uniprot
Match: C1E2H3_MICCC (Uncharacterized protein n=5 Tax=cellular organisms TaxID=131567 RepID=C1E2H3_MICCC)

HSP 1 Score: 99.0 bits (245), Expect = 1.860e-21
Identity = 51/129 (39.53%), Postives = 73/129 (56.59%), Query Frame = 0
Query:    4 PEIRTRLEAVHGCRAGDVRGCVWYNYEQGIVYPAAALGVIYDPRTGQQSYHTGHSSDIISLAVSSCRRFVASGDAADPPQVHVWDALSLELARLLPSLHSVGVALLAFSQDGHWLASVGHDLEHTVAVY 132
            P+   +L+ V+G RA D R  + YN +  + YPAAA G+ YD R   Q + T H+ DI+SLA+   R  +A+G     P + VW + + EL   L   H   V  L+F   G +LASVG D +H+VA+Y
Sbjct:   64 PDHHLQLDFVYGYRAHDSRHNLVYNIDGLVTYPAAATGIAYDSREHTQQFFTMHTDDIVSLAMHPDREIMATGQVGKDPTICVWSSTTCELLAELKGFHQRAVVSLSFDGTGKYLASVGLDDDHSVAIY 192          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15917.3819.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L9W0_9PHAE2.050e-6273.05HELP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FR21_ECTSI7.430e-6273.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2FNZ1_9STRA4.120e-3245.80Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A067D8Y7_SAPPC1.010e-2847.33EF-hand domain-containing protein n=2 Tax=Saproleg... [more]
A0A7S4KLV8_GUITH7.450e-2338.46Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7S0VVP2_9CRYP1.380e-2236.15Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A6P8IWD2_ACTTE2.160e-2240.65echinoderm microtubule-associated protein-like 6 n... [more]
J9I4R1_9SPIT4.040e-2236.15HELP domain containing protein n=1 Tax=Oxytricha t... [more]
C1EGF3_MICCC1.010e-2140.00Uncharacterized protein n=1 Tax=Micromonas commoda... [more]
C1E2H3_MICCC1.860e-2139.53Uncharacterized protein n=5 Tax=cellular organisms... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 16..133
e-value: 5.2E-36
score: 126.3
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 4..15
e-value: 5.2E-36
score: 126.3
IPR005108HELPPFAMPF03451HELPcoord: 2..45
e-value: 4.6E-9
score: 36.0
NoneNo IPR availablePANTHERPTHR13720WD-40 REPEAT PROTEINcoord: 5..132
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 14..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15917contigH-elongata_contig15917:1650..2755 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15917.3819.1mRNA_H-elongata_contig15917.3819.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15917 1650..2755 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15917.3819.1 ID=prot_H-elongata_contig15917.3819.1|Name=mRNA_H-elongata_contig15917.3819.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=134bp
MTAPEIRTRLEAVHGCRAGDVRGCVWYNYEQGIVYPAAALGVIYDPRTGQ
QSYHTGHSSDIISLAVSSCRRFVASGDAADPPQVHVWDALSLELARLLPS
LHSVGVALLAFSQDGHWLASVGHDLEHTVAVYK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR005108HELP
IPR036322WD40_repeat_dom_sf