mRNA_H-elongata_contig15906.3817.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig15906.3817.1
Unique NamemRNA_H-elongata_contig15906.3817.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig15906.3817.1 vs. uniprot
Match: D7FHQ5_ECTSI (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHQ5_ECTSI)

HSP 1 Score: 476 bits (1224), Expect = 8.820e-163
Identity = 260/425 (61.18%), Postives = 301/425 (70.82%), Query Frame = 1
Query:   19 VVYPEDDDVNMPKVFARQSFIVSGEEEEMAETILKARQLAGERRRSVLKPEDTVGKQGEIAAVAQNLAHRRDSLEILEYPLAVAGPSVGTPLQVGVTTDSAEDHDAARRRSSVLNRIPDNLRALVQQSDASGVQQKMESPYSPR---QDQVVVSKTDGRDDTDVVSLTSSMTHLAGGHH-KSWFQKIMASIQWKNLKPKRKQHTKESECKGRKDDNVTPATTPKPA---ISQETPPLLPKQLSIFAGRKKLILDLDETLAHSSFKPVVGADFILDIDVEGTHYKVFVRIRPGVDEFLQRMSRLYEVIIFTASLPQYANPLLDLLDPSGYITSRLFREHCTFHEGYFVKDLILLRHESLESTIIVDNSPMAYMFQPENAIDCMSWIDEKSDTELYVIADFLEAIVDVPDVRDLLEFWREGGNILSN 1272
            VVYPE  D   PKVFARQSF+ SGEEEEMA+TIL+ARQLAG+RRRS         ++GEIA VAQNLA RRDS        A            GV  D A+    ARRRSSV+ ++PDNLRALVQQSDASGVQ+K ESPY+P+    D+   + TD       ++ T S T   G    + W   +M  I+WK +        K +   G  ++  TP  +P P    + ++   LLPKQL  FAGRK+LILDLDETL HSSFKPV GADFI+DI V+GT YKVFV  RPGVD FL+R+++LYEVIIFTASLPQYANPLLD+LDP G ITSRLFREHCTFHEGYFVKDL LLRH+SLESTIIVDNSPMAYMFQPENAIDC+SWID++ DTEL VIA FLE IVDVPDVRDLLEFWREG  +L N
Sbjct:   59 VVYPEKHDAGKPKVFARQSFVASGEEEEMADTILQARQLAGQRRRSTFNANKKTAREGEIAQVAQNLAARRDSSAAATVNAAAGXXXXXXXXXAGVAVDPADADAVARRRSSVM-KLPDNLRALVQQSDASGVQKKTESPYNPQGASDDKAQTTTTDNTXXXXXLNNTGSSTASTGSTRGRGWLSNVMTFIRWKKVP---NSDRKRASRGGGGEEGGTPGLSPTPGKGGLGKKRRSLLPKQLPEFAGRKQLILDLDETLVHSSFKPVPGADFIMDIMVDGTFYKVFVLKRPGVDAFLERVAKLYEVIIFTASLPQYANPLLDVLDPKGTITSRLFREHCTFHEGYFVKDLTLLRHQSLESTIIVDNSPMAYMFQPENAIDCISWIDDREDTELDVIASFLETIVDVPDVRDLLEFWREGAAVLDN 479          
BLAST of mRNA_H-elongata_contig15906.3817.1 vs. uniprot
Match: A0A836CEE7_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEE7_9STRA)

HSP 1 Score: 333 bits (853), Expect = 9.440e-107
Identity = 214/462 (46.32%), Postives = 262/462 (56.71%), Query Frame = 1
Query:    1 SRRRSSVVYPEDDDVNMPKVFARQSFIVSGEEEEMAETILKARQLAGERRRSVLKPEDTVGKQGEIAAVAQNLAHRRDSLEILEYPLAVAGPSVGTPLQVGVTT---------------DSAEDHDAARRRSSVLNRIPDNLRALVQQSDASGVQQKMESPYSP----------------RQDQVVVSKTDGRDDTDVVSLTSSMTH---LAGGHHKSWFQKIMASIQWKN-LKPKRKQHTKESECKGRKDDNVTPA---TTPKPAISQETPPLLPKQLSIFAGRKKLILDLDETLAHSSFKPVVGADFILDIDVEGTHYKVFVRIRPGVDEFLQRMSRLYEVIIFTASLPQYANPLLDLLDPSGYITSRLFREHCTFHEGYFVKDLILLRH-ESLESTIIVDNSPMAYMFQPENAIDCMSWIDEKSDTELYVIADFLEAIVDVPDVRDLLEFWREGGNILS 1269
            S R  SVV+PE  D   PK+FARQSF+V+ + E MAETIL+AR+LA ERRRSV          G + A+A     RR S +     +A                               +  + H   RRRSS + ++P  LRAL+QQSD +G+QQK                        Q   V    D  +++  VS  S        +G     W+  +++  +  +      K  T                   TT +P +      LLP Q   FAGRK L+LDLDETL HSSFKPV  +D+ILDI V+ T YKVFV  RPGVDEFL+R+S+ YEVIIFTASLPQYANPLLD+LDP GYIT RLFREHCTFHEGYFVKDL LLR+ ++L  TIIVDNSPMAYMFQP+NAIDC SW+++  D ELYVIADFLE   DV DVRD +EFWREG  +LS
Sbjct:   30 SSRSGSVVFPEATDEGKPKLFARQSFLVTADNEAMAETILEARKLAMERRRSV-------ADDGGVHALA-----RRASADDKAAAMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGDKPHLDERRRSSAIQKLPPQLRALMQQSDENGIQQKXXXXXXXXXXXXXXXXXXXXXXHHQLTGVQEAADAEEESIHVSADSPKQQSQSASGSGGNGWYTTMVSCFKRSDEANDDAKAATXXXXXXXXXXXGSGKGKTFTTSEPTVPAS---LLPPQAKQFAGRKLLVLDLDETLVHSSFKPVPTSDYILDIMVDSTAYKVFVLKRPGVDEFLERVSKDYEVIIFTASLPQYANPLLDMLDPKGYITGRLFREHCTFHEGYFVKDLTLLRNNKNLSDTIIVDNSPMAYMFQPDNAIDCTSWLEDPVDEELYVIADFLEKTKDVTDVRDYVEFWREGAEVLS 476          
BLAST of mRNA_H-elongata_contig15906.3817.1 vs. uniprot
Match: A0A835YRL6_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRL6_9STRA)

HSP 1 Score: 269 bits (687), Expect = 1.640e-81
Identity = 204/508 (40.16%), Postives = 246/508 (48.43%), Query Frame = 1
Query:    1 SRRRSSVVYPEDDDVNMPKVFARQSFIVSGEEEEMAETILKARQLAGERRRSVLKPEDTVGKQGEIAAVAQNLAHRRDSLEILEYPLAVAGPSVGTPLQVGVTTDSAEDHDAARRRSSVLNRIPDNLRALVQQSDASGVQQKMESPYSPRQDQVVVSKTDGRDDTDVVSLTSSMTHLA---------------GGHHKSWFQKIMASIQWKNLKPKRKQHTKESECKGRKDDNVTPATTPKPAISQETPPLLPKQLSIFAGRKKLILDLDETLAHSSFKPVVGADFILDIDVEGTHYK----------------------VFVRIRPGVDEFLQRMSRLYEVIIFTASLPQYANPLLDLLDPSGYITSRLFREHCTFHEGYFVKD----------------------LILLRHES-LESTIIVDNSPMAYMFQPENAIDCMSWID-------------------------EKSDTELYVIADFLEAIVDVPDVRDLLEFWREGGNILS 1269
            SR  S +V PE  D+  PK+FARQSF+V+ + E MAETIL+AR+LA ERRRSV          G + A+A     RR S                            ++    RRRSSV+  +P +LRAL+QQSD +GVQQK    + P     +  K     D    SL   +T++A               G                                     +       PK A     P L PK+   F GRK L+LDLDETL HSSFKPV  +D+ILDI V+ T YK                      VFV  RPGVDEFL+R+S+ YEVIIFTASLPQYANPLLD LDP G IT+RLFREHCTFHEGYFV                        L LLR+ + L  TIIVDNSPMAYMFQP+NAIDC SW++                         +  D ELYVIA FLE I  VP+VRD +EFWREG  ++ 
Sbjct:   29 SRSGSVLVLPEASDIGKPKLFARQSFLVTADNEAMAETILEARKLAIERRRSV-------ADDGGVHALA-----RRASAXXXXXXXXXXXXXXXXXXXXXXXXPRMDE----RRRSSVIQILPPHLRALMQQSDENGVQQKWARGW-PALGAALSRKLRQMWDAPPPSLHHQLTNVAESPDVEEASTRTPRNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEESLLGPQPKLAW----PGLRPKR---FVGRKLLVLDLDETLVHSSFKPVPKSDYILDIMVDDTPYKLGMRGSRRDRARAAETHGRVGCVFVLKRPGVDEFLERVSKDYEVIIFTASLPQYANPLLDRLDPKGLITARLFREHCTFHEGYFVXXXXXXXXXXXXXXXXXXXXXXXXLTLLRNNTNLSDTIIVDNSPMAYMFQPDNAIDCTSWLELRRALSLRCVRARRSSDVSRAREHEDPMDEELYVIAAFLERIRGVPEVRDYVEFWREGSEVMD 512          
BLAST of mRNA_H-elongata_contig15906.3817.1 vs. uniprot
Match: A0A7S2I1W8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I1W8_9STRA)

HSP 1 Score: 206 bits (525), Expect = 1.500e-60
Identity = 104/186 (55.91%), Postives = 132/186 (70.97%), Query Frame = 1
Query:  706 LLPKQLSIFAGRKKLILDLDETLAHSSFKPVVGADFILDIDVEGTHYKVFVRIRPGVDEFLQRMSRLYEVIIFTASLPQYANPLLDLLDPSGYITSRLFREHCTFHEGYFVKDLILLRHESLESTIIVDNSPMAYMFQPENAIDCMSWIDEKSDTELYVIADFLEAIVDVPDVRDLLEFWREGGNI 1263
            LLPK      G+K L+LDLDETL HSSF+ V GADF++ + +E   + V+V  RPGVD FL  M++ YE+I++TASL +YA+PLLDLLDP+  I +RLFRE C ++EG +VKDL LL  + L   IIVDNSP +Y+F PENAIDC S+ID+ SD EL  I  FL  + DV DVRD+   WRE  NI
Sbjct:   55 LLPKHHPDDQGKKCLVLDLDETLVHSSFRAVAGADFVIPVQIEDVVHFVYVAKRPGVDSFLTEMAKHYEIIVYTASLNKYADPLLDLLDPNRVIRTRLFRESCVYYEGNYVKDLSLLDRD-LSQAIIVDNSPNSYIFHPENAIDCSSFIDDPSDRELDQIGAFLAGVKDVDDVRDVCNLWREWPNI 239          
BLAST of mRNA_H-elongata_contig15906.3817.1 vs. uniprot
Match: A0A2P4XKU3_9STRA (Nuclear LIM factor interactor-interacting protein cleavage-specific form n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XKU3_9STRA)

HSP 1 Score: 207 bits (526), Expect = 4.470e-60
Identity = 107/194 (55.15%), Postives = 133/194 (68.56%), Query Frame = 1
Query:  667 TTPKPAISQETPPLLPKQLSIFAGRKKLILDLDETLAHSSFKPVVGADFILDIDVEGTHYKVFVRIRPGVDEFLQRMSRLYEVIIFTASLPQYANPLLDLLDPSGYITSRLFREHCTFHEGYFVKDLILLRHESLESTIIVDNSPMAYMFQPENAIDCMSWIDEKSDTELYVIADFLEAIVDVPDVRDLLEFWR 1248
            TTP     Q  P LLP   S  A +K L+LDLDETL HSSF+P   ADFI+ ID++GT + V+V  RPG +EFL  M++ YE++++TASL +YA+PLLD LDP G I  RL+REHC  +EG +VKDL LL  + L  TIIVDNSP AY F P NAI C S+ID+ +D EL  I+ FL    DV DVRD L+FW 
Sbjct:  113 TTPVSKEIQLRPNLLPSVSSNDANKKCLVLDLDETLVHSSFRPTDNADFIIPIDIDGTTHHVYVMKRPGAEEFLVEMAKYYEIVVYTASLSKYADPLLDKLDPEGTIRYRLYREHCVQYEGSYVKDLSLLDRD-LSQTIIVDNSPAAYTFHPRNAIGCSSFIDDPNDRELASISRFLTKYHDVEDVRDRLQFWN 305          
BLAST of mRNA_H-elongata_contig15906.3817.1 vs. uniprot
Match: A0A7S1DE55_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DE55_CYCTE)

HSP 1 Score: 209 bits (532), Expect = 8.520e-60
Identity = 109/217 (50.23%), Postives = 143/217 (65.90%), Query Frame = 1
Query:  622 ESECKGRKDDNVTPATTPKPAISQETPPLLPKQLSIFAGRKKLILDLDETLAHSSFKPVVGADFILDIDVEGTHYKVFVRIRPGVDEFLQRMSRLYEVIIFTASLPQYANPLLDLLDPSGYITSRLFREHCTFHEGYFVKDLILLRHESLESTIIVDNSPMAYMFQPENAIDCMSWIDEKSDTELYVIADFLEAIVDVPDVRDLLEFWREGGNILSN 1272
            E   +G K  +      P     ++T  LLP    +  G+K L+LDLDETL HSSF+ V GADF++ + +E   + V+V  RPGVDEFL  M++ YE++I+TASL +YA+PLLDLLDP   I +RLFRE C +HEG +VKD+ LL  + L  +IIVDNSP +Y+F PENAIDC S+ID+  D EL  I  FL  I DV DVR+L  FWRE  ++  N
Sbjct:  183 EENQQGAKAQHTAVDDDPVEKTREQTIRLLPDVHPVDHGKKCLVLDLDETLVHSSFRAVPGADFVIPVQIEDVVHFVYVAKRPGVDEFLVEMAKHYEIVIYTASLNKYADPLLDLLDPCRVIRARLFRESCVYHEGNYVKDMSLLNRD-LSQSIIVDNSPSSYLFHPENAIDCSSFIDDPQDRELDQIGAFLTGIKDVEDVRNLCSFWREWPHVEIN 398          
BLAST of mRNA_H-elongata_contig15906.3817.1 vs. uniprot
Match: A0A225W5E9_9STRA (Nuclear LIM factor interactor-interacting protein spore-specific form n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W5E9_9STRA)

HSP 1 Score: 202 bits (515), Expect = 1.480e-58
Identity = 118/263 (44.87%), Postives = 157/263 (59.70%), Query Frame = 1
Query:  463 VVSKTD--GRDDTDVVSLTSSMTHLAGGHHKSWFQKIMASIQWKNLKPKRKQHTKESECKGRKDDNVTPATTPKPAISQETPPLLPKQLSIFAGRKKLILDLDETLAHSSFKPVVGADFILDIDVEGTHYKVFVRIRPGVDEFLQRMSRLYEVIIFTASLPQYANPLLDLLDPSGYITSRLFREHCTFHEGYFVKDLILLRHESLESTIIVDNSPMAYMFQPENAIDCMSWIDEKSDTELYVIADFLEAIVDVPDVRDLLEFW 1245
            VV +TD  G+    +  L    T  + G H+  F+ I  +I W  L    +    +   + R   +     T   AI Q  P LLP      A +K L+LDLDETL HSSF+P   ADFI+ ID++GT + V+V  RPG +EFL  M++ YE++++TASL +YA+PLLD LDP   I  RL+REHC  +EG +VKDL LL  + L  TIIVDNSP AY F P+NAI C S+ID+ +D EL  I+ FL    DV DVR+ L+ W
Sbjct:   36 VVHQTDENGKQQPILTGLRRESTSTSKGQHRGSFRNIFGNI-WSALSTHDQSQDLDKTNRRRSSLSKPKTATVSNAI-QLRPNLLPPVSPNDANKKCLVLDLDETLVHSSFRPTDNADFIIPIDIDGTTHHVYVAKRPGAEEFLIEMAKYYEIVVYTASLSKYADPLLDKLDPEDVIRYRLYREHCVQYEGNYVKDLSLLDRD-LSQTIIVDNSPAAYTFHPQNAIGCSSFIDDPNDRELASISRFLTKHYDVEDVREHLQIW 295          
BLAST of mRNA_H-elongata_contig15906.3817.1 vs. uniprot
Match: A0A6H5JYB3_9PHAE (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB3_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 1.580e-57
Identity = 92/109 (84.40%), Postives = 101/109 (92.66%), Query Frame = 1
Query:  817 LDIDVEGTHYKVFVRIRPGVDEFLQRMSRLYEVIIFTASLPQYANPLLDLLDPSGYITSRLFREHCTFHEGYFVKDLILLRHESLESTIIVDNSPMAYMFQPENAIDCM 1143
            +DI V+ T YKVFV  RPGVDEFL+R+++LYEVIIFTASLPQYANPLLD+LDP G ITSRLFREHCTFHEGYFVKDL LLRH+SLESTIIVDNSPMAYMFQPENAIDC+
Sbjct:    1 MDIMVDDTFYKVFVLKRPGVDEFLERVAKLYEVIIFTASLPQYANPLLDMLDPKGTITSRLFREHCTFHEGYFVKDLTLLRHQSLESTIIVDNSPMAYMFQPENAIDCI 109          
BLAST of mRNA_H-elongata_contig15906.3817.1 vs. uniprot
Match: A0A6U3ZQT6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZQT6_9STRA)

HSP 1 Score: 204 bits (519), Expect = 1.660e-57
Identity = 103/186 (55.38%), Postives = 133/186 (71.51%), Query Frame = 1
Query:  706 LLPKQLSIFAGRKKLILDLDETLAHSSFKPVVGADFILDIDVEGTHYKVFVRIRPGVDEFLQRMSRLYEVIIFTASLPQYANPLLDLLDPSGYITSRLFREHCTFHEGYFVKDLILLRHESLESTIIVDNSPMAYMFQPENAIDCMSWIDEKSDTELYVIADFLEAIVDVPDVRDLLEFWREGGNI 1263
            LLPK      G+K L+LDLDETL HSSF+ V GADF++ + +E   + V+V  RPGVDEFL  M++ YE++I+TASL +YA+PLLDLLDP+  I +RLFRE C ++EG +VKDL LL  + L   IIVDNSP +Y+F PENAIDC S+ID+ +D EL  I  FL  + DV DVRD+   WR+  NI
Sbjct:  239 LLPKHHPDDMGKKCLVLDLDETLVHSSFRAVPGADFVIPVQIEDVVHFVYVAKRPGVDEFLTEMAQHYELVIYTASLNKYADPLLDLLDPNRVIRTRLFRESCVYYEGNYVKDLSLLDRD-LSQAIIVDNSPSSYIFHPENAIDCSSFIDDPTDRELDQIGAFLAGVKDVEDVRDVCSLWRQYPNI 423          
BLAST of mRNA_H-elongata_contig15906.3817.1 vs. uniprot
Match: A0A7S1YHT6_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YHT6_9STRA)

HSP 1 Score: 204 bits (519), Expect = 1.750e-57
Identity = 106/199 (53.27%), Postives = 138/199 (69.35%), Query Frame = 1
Query:  667 TTPKPAISQETPPLLPKQLSIFAGRKKLILDLDETLAHSSFKPVVGADFILDIDVEGTHYKVFVRIRPGVDEFLQRMSRLYEVIIFTASLPQYANPLLDLLDPSGYITSRLFREHCTFHEGYFVKDLILLRHESLESTIIVDNSPMAYMFQPENAIDCMSWIDEKSDTELYVIADFLEAIVDVPDVRDLLEFWREGGNI 1263
            TT +P   + T  LLP       G+K L+LDLDETL HSSF+ V GADF++ + +E   + V+V  RPGVDEFL  M++ YE++++TASL +YA+PLLDLLDP+  I SRLFRE C ++EG +VKDL LL  + L+ +IIVDNSP +Y+F PENAIDC S+ID+ +D EL  I  FL  I  V DVR L   WRE  N+
Sbjct:  242 TTAEPKPDENTVKLLPPIHPDDKGKKCLVLDLDETLVHSSFRSVPGADFVIPVQIEDVVHFVYVMKRPGVDEFLTEMAKHYEIVVYTASLNKYADPLLDLLDPNKVIRSRLFRESCVYYEGNYVKDLSLLDRD-LKESIIVDNSPNSYIFHPENAIDCSSFIDDPNDRELDQIGAFLAGISKVKDVRHLSNKWREWPNV 439          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15906.3817.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHQ5_ECTSI8.820e-16361.18FCP1 homology domain-containing protein n=1 Tax=Ec... [more]
A0A836CEE7_9STRA9.440e-10746.32HAD-like domain-containing protein n=1 Tax=Tribone... [more]
A0A835YRL6_9STRA1.640e-8140.16HAD-like domain-containing protein n=1 Tax=Tribone... [more]
A0A7S2I1W8_9STRA1.500e-6055.91Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A2P4XKU3_9STRA4.470e-6055.15Nuclear LIM factor interactor-interacting protein ... [more]
A0A7S1DE55_CYCTE8.520e-6050.23Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A225W5E9_9STRA1.480e-5844.87Nuclear LIM factor interactor-interacting protein ... [more]
A0A6H5JYB3_9PHAE1.580e-5784.40FCP1 homology domain-containing protein n=1 Tax=Ec... [more]
A0A6U3ZQT6_9STRA1.660e-5755.38Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1YHT6_9STRA1.750e-5753.27Hypothetical protein n=2 Tax=Grammatophora oceanic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15906contigH-elongata_contig15906:2648..6605 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score479.6
Seed ortholog evalue1.6e-132
Seed eggNOG ortholog2880.D7FHQ5
KEGG koko:K15731,ko:K17616
GOsGO:0003674,GO:0003824,GO:0004721,GO:0004722,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006355,GO:0006357,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008420,GO:0009889,GO:0009987,GO:0010468,GO:0010556,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0036211,GO:0042578,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.phosphoprotein phosphatase activity
EggNOG OGsCOG5190@1,KOG1605@2759
EC3.1.3.16
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009,ko03021
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDullard phosphatase domain, eukaryotic
Ec32 orthologEc-07_006400.1
Exons10
Model size1278
Cds size1278
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15906.3817.1prot_H-elongata_contig15906.3817.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig15906 2648..6605 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929936.365927-CDS-H-elongata_contig15906:2647..27831622929936.365927-CDS-H-elongata_contig15906:2647..2783Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15906 2648..2783 +
1691679214.5442429-CDS-H-elongata_contig15906:2647..27831691679214.5442429-CDS-H-elongata_contig15906:2647..2783Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15906 2648..2783 +
1622929936.3832226-CDS-H-elongata_contig15906:3235..34771622929936.3832226-CDS-H-elongata_contig15906:3235..3477Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15906 3236..3477 +
1691679214.5573778-CDS-H-elongata_contig15906:3235..34771691679214.5573778-CDS-H-elongata_contig15906:3235..3477Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15906 3236..3477 +
1622929936.398951-CDS-H-elongata_contig15906:3640..37721622929936.398951-CDS-H-elongata_contig15906:3640..3772Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15906 3641..3772 +
1691679214.5659204-CDS-H-elongata_contig15906:3640..37721691679214.5659204-CDS-H-elongata_contig15906:3640..3772Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15906 3641..3772 +
1622929936.4227948-CDS-H-elongata_contig15906:4050..42871622929936.4227948-CDS-H-elongata_contig15906:4050..4287Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15906 4051..4287 +
1691679214.581039-CDS-H-elongata_contig15906:4050..42871691679214.581039-CDS-H-elongata_contig15906:4050..4287Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15906 4051..4287 +
1622929936.439048-CDS-H-elongata_contig15906:4499..46011622929936.439048-CDS-H-elongata_contig15906:4499..4601Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15906 4500..4601 +
1691679214.5990622-CDS-H-elongata_contig15906:4499..46011691679214.5990622-CDS-H-elongata_contig15906:4499..4601Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15906 4500..4601 +
1622929936.4515588-CDS-H-elongata_contig15906:4754..48711622929936.4515588-CDS-H-elongata_contig15906:4754..4871Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15906 4755..4871 +
1691679214.6083434-CDS-H-elongata_contig15906:4754..48711691679214.6083434-CDS-H-elongata_contig15906:4754..4871Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15906 4755..4871 +
1622929936.4635577-CDS-H-elongata_contig15906:5196..52711622929936.4635577-CDS-H-elongata_contig15906:5196..5271Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15906 5197..5271 +
1691679214.6171725-CDS-H-elongata_contig15906:5196..52711691679214.6171725-CDS-H-elongata_contig15906:5196..5271Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15906 5197..5271 +
1622929936.4744616-CDS-H-elongata_contig15906:5717..58211622929936.4744616-CDS-H-elongata_contig15906:5717..5821Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15906 5718..5821 +
1691679214.6259181-CDS-H-elongata_contig15906:5717..58211691679214.6259181-CDS-H-elongata_contig15906:5717..5821Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15906 5718..5821 +
1622929936.485823-CDS-H-elongata_contig15906:6046..61191622929936.485823-CDS-H-elongata_contig15906:6046..6119Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15906 6047..6119 +
1691679214.6345508-CDS-H-elongata_contig15906:6046..61191691679214.6345508-CDS-H-elongata_contig15906:6046..6119Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15906 6047..6119 +
1622929936.4988399-CDS-H-elongata_contig15906:6545..66051622929936.4988399-CDS-H-elongata_contig15906:6545..6605Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15906 6546..6605 +
1691679214.6433918-CDS-H-elongata_contig15906:6545..66051691679214.6433918-CDS-H-elongata_contig15906:6545..6605Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15906 6546..6605 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig15906.3817.1

>prot_H-elongata_contig15906.3817.1 ID=prot_H-elongata_contig15906.3817.1|Name=mRNA_H-elongata_contig15906.3817.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=426bp
SRRRSSVVYPEDDDVNMPKVFARQSFIVSGEEEEMAETILKARQLAGERR
RSVLKPEDTVGKQGEIAAVAQNLAHRRDSLEILEYPLAVAGPSVGTPLQV
GVTTDSAEDHDAARRRSSVLNRIPDNLRALVQQSDASGVQQKMESPYSPR
QDQVVVSKTDGRDDTDVVSLTSSMTHLAGGHHKSWFQKIMASIQWKNLKP
KRKQHTKESECKGRKDDNVTPATTPKPAISQETPPLLPKQLSIFAGRKKL
ILDLDETLAHSSFKPVVGADFILDIDVEGTHYKVFVRIRPGVDEFLQRMS
RLYEVIIFTASLPQYANPLLDLLDPSGYITSRLFREHCTFHEGYFVKDLI
LLRHESLESTIIVDNSPMAYMFQPENAIDCMSWIDEKSDTELYVIADFLE
AIVDVPDVRDLLEFWREGGNILSNE*
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mRNA from alignment at H-elongata_contig15906:2648..6605+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig15906.3817.1 ID=mRNA_H-elongata_contig15906.3817.1|Name=mRNA_H-elongata_contig15906.3817.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3958bp|location=Sequence derived from alignment at H-elongata_contig15906:2648..6605+ (Himanthalia elongata Himel1 dioecious)
AGCAGACGCCGATCAAGCGTTGTCTACCCTGAAGATGATGACGTCAACAT GCCCAAGGTTTTCGCCCGTCAGTCCTTCATCGTGTCCGGGGAGGAGGAAG AAATGGCGGAGACTATCCTTAAGGCTCGACAGCTTGGTGCGAAGACATGT CGGAAGCTTGGGATATTTTGATCCCACGCCAAGATACGCTTTCGATTGTG TTTCGTCTCTCAATTTAACGTACATGATCGTGTCATGATTGGGCGCGGAT GGCCGATCTAGCGTGAGGTTTCCCAATTTCGGGATTTCACCGATATTCTG TCTCACTGTTTACTACCTGACATCGCCCTATCTGTACTTGTGGTCGGCCT TCGTTGCCCGCGTCCTACGAGGCTTTTGGGTCTAAAAATCAGGCGAGGAA TCGTGACGTCGATTTCGTAGAATACCACACCCGTAGCTCACTTTTACGCA CGGGAGGAGAAATTTACTCAGACAACCCTGGGTACTGTGTGGATGTTTTA GTGGTTCCCTTCCTTTTGTTGCGCTGCCTTTATGAAAAGCCCTTGTATGT AAACAAAACCTTACTCCCGTTCAATTTTTCCTTCACAGCCGGGGAAAGGC GTCGATCGGTTCTTAAGCCCGAGGACACTGTTGGCAAGCAAGGAGAGATA GCCGCAGTGGCGCAGAATCTTGCACATCGACGTGACTCCCTCGAGATATT GGAATACCCTTTAGCAGTTGCGGGACCATCAGTCGGTACACCCCTTCAGG TCGGGGTGACCACTGACTCCGCGGAAGATCATGATGCTGCTCGCCGACGT TCCTCCGTCCTCAATCGCATCCCTGACAACGTGAGTGGTTTCGTTGTGAC TTTCGGAGGTGACTAGGAAGATATATAAACCTCCCGCGAGTGCCTGGTCT TTTTAATGGCCCTATCAAAGTATGAATAGTATGAGTGCCTTTAAAAAAAA AGGCATCCCTCCCACTTCTCCGCTCCTCCCTACCGAATCGCAGCTCCGAG CTCTTGTGCAGCAGTCCGATGCCAGTGGCGTGCAGCAGAAGATGGAATCA CCATATTCTCCGAGGCAAGATCAGGTGGTTGTCTCAAAAACGGATGGGCG TGACGACACGGACGTGGTGAGTCTGGTGCTTATACACTACTGGCGATAGT CGAAGATCTACAACATAGTAACCTAACATACTCTGAAAAATAGCAGAACG TTTGGGCGATAGCTTCTCCGTCACGAATATTCCATCTTCTCGCTCCAATT CAGCGCTCATGATCTCCTGGTTATTTAAACGTCCGTCACAAGTCCTCTTC TCTCTTGAAGTCACGGATGTCGATCCGCGCAAAACGATCCGCGCTTTACC AACCGTCGCCCCCCGTCGCCGCCCGTCGTCTATTGATATATATTACGACG AAGACTTCCTCCATGACTCACCTTGCCGGTGGCCACCATAAAAGCTGGTT CCAAAAAATAATGGCCTCCATACAATGGAAGAACTTAAAACCCAAACGGA AACAACACACGAAGGAGTCGGAATGCAAGGGGAGAAAGGACGATAATGTG ACGCCCGCGACAACCCCGAAACCGGCTATATCCCAGGAGACACCCCCCCT GCTTCCCAAGCAGCTGTCCATCTTTGCCGGCCGCAAAAAGGTGGCTTTTT CAAGAGTATAGCTACAGCGCGGAGAGCGGATCAAGTTGTTGTTCCGACGA CATCCAGTTCCATAAAAGAATACGTCTTCGCTCTGTAGTTGACCTCCCGA TATGTAATTGGGAATCATTATATCGAAGAGTTCTTGCGGTTTCGCCCTTT TATCCCCAACACTCCGTGCCGCGCGATCAACCTGACGCTACCTTTACGGC AGTTAATCCTGGACCTGGATGAGACGTTGGCTCATTCTTCCTTCAAGCCG GTTGTTGGGGCGGATTTCATCCTGGACATAGACGTCGAAGGCACCCACTA CAAGGTGCCCATTTCCCTCAGGGCCCGTAAATCAGTGCCCCGATCCTCTT ATTTTCTCAGTGTTTTCGCTACAACACTCCTTTCTGCATGCTGTCGAGAT CAGAATAAATATCACAGCACATCCCCTGGCGTTTCTTTACACTCCGCCGA CTGACAGGTTTTCGTTCGGATACGCCCAGGGGTGGATGAGTTCCTTCAAC GAATGTCAAGGTTGTACGAGGTGATAATTTTCACGGCAAGCCTGCCTCAG TACGCCAACCCTCTCCTTGACCTGGTGAGGTCAGCACTCGGGTGTTCACG ACATGTGGCCGTTGCTCATGGCTCGCTCAACGTTCACTTCACTCCTGCTC AGGGCAGGTTTCTCTTTCTCGTTCTCTGTATTTGCTTAGGCTGTAGGACC ATCGGAAAAATTATGGCAAGTTTTCGTTTACGGAGTTCACCGTGCAAGGC TGTGTGGAAAATGGTACCATGGTGTCTACATTCTGCGTACACGACACAAC ACTAACCAGAGATGGATAGAGGTATACATTCCCGATTAACGACCCTGTCA CTTGCGCCTCGTTTCTGTACACCCTCTTGATTAAACCTTCCACCGCCAGC TGGACCCAAGTGGATATATTACATCCAGGCTTTTCCGAGAGCATTGCACT TTTCACGAGGGCTACTTCGTCAAGGTGACGAGAGATGGTTGTGTTGTCGA GCGTTGTCAAACTGATGAGCATATAGGCATGTCATCCAAGGCGCAAGGTT AAGCGTACGACGCGCGCTTATTAGTTGGCAATACGCTAATAATACTGATG AGCTGAGGCTTGGAGGAGGAACTGCTACGAGTGTGTGCTTCGGAGTGGGA TTGCATTTGTTTTATCATCATGAAATATCCTTAAGGCCGCCGAGTGATTT CATATATGAATAGTTATTTTTTATGTGTTCTCTTCCTCCAGCAGACATCA GCATTCCATTGCTTCTTGAAAGGGGCACCTAATTCAAACCACCTTTACCA GGGAACACACTGCTGTTATATGTCTTAATCCTTTCTTCCGCCATCGCCCA CACGCGGTTGCATTCTCCCTCCCGGTAATTTGTCGCGACTCTACCGCAAA CTGGTTCGTGATGAGCTCAGGACTTAATACTCCTGCGGCACGAGAGCTTG GAATCTACCATCATCGTCGATAACTCTCCAATGGCCTATATGTTCCAGCC GGAAAATGCTATTGATTGCATGAGGTACAATCCGGCTCAAATTGCAGTCG CAATATATTTTAAATATATGCTACCAGTACCACCTCGTAATGCCAGGTGT GCTATTATTATCGAGGAGACTGAGTTACGCTACTACTATCGTTTGAGGTT CACGCTTTTATGTACTATCGTTTATGTACCGACCAGGCTTGGTCTCCTCG CGTTCCTCCCCAACGCGCGATACTGACTGTCGTTCGAATTTCGAGGTAGC TGGATCGACGAAAAAAGTGACACCGAGCTCTACGTTATCGCCGACTTCCT TGAAGCGATCGTGGATGTACCGGTGAGGGAAACCCCGAGTAGTCATCTTT ATTTTAGTAAACAAATATGCTACATAAAGCAATCGTATTATGGTAGCCCA GACTACTCGTGTAAGTACGATCCTAACATTTCGTGGCTGCAAAGGTGTTG AATTGTTGCCTACTCGGAGCTATCTGATGCGGCCATGCAAAAAATTCTAC GATAATATTATTCTTAAATATAATATGAACTCATTCCTACCCTCCGTCCA GGGGACCAACTATCGTCAGGGGATTTGTTCGAGACTGTCAATATTTTTGA TAGGTTCTTGACTTTATCTCAAGTTTGATGATGCGTGACAATATTTTCCC TTCGTGAAAATCAGGCCACCCTCCACTAGGAGAGTAATCGAACTATCTAT GCCCTCGTATCCTACCACAAACTAAAACGGATGCAACGCGCGTGACAGGA TGTTCGCGATCTCCTGGAGTTCTGGCGAGAGGGGGGTAACATTCTATCAA ACGAATGA
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Coding sequence (CDS) from alignment at H-elongata_contig15906:2648..6605+

>mRNA_H-elongata_contig15906.3817.1 ID=mRNA_H-elongata_contig15906.3817.1|Name=mRNA_H-elongata_contig15906.3817.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2556bp|location=Sequence derived from alignment at H-elongata_contig15906:2648..6605+ (Himanthalia elongata Himel1 dioecious)
AGCAGACGCCGATCAAGCGTTGTCTACCCTGAAGATGATGACGTCAACAT
GCCCAAGGTTTTCGCCCGTCAGTCCTTCATCGTGTCCGGGGAGGAGGAAG
AAATGGCGGAGACTATCCTTAAGGCTCGACAGCTTGAGCAGACGCCGATC
AAGCGTTGTCTACCCTGAAGATGATGACGTCAACATGCCCAAGGTTTTCG
CCCGTCAGTCCTTCATCGTGTCCGGGGAGGAGGAAGAAATGGCGGAGACT
ATCCTTAAGGCTCGACAGCTTGCCGGGGAAAGGCGTCGATCGGTTCTTAA
GCCCGAGGACACTGTTGGCAAGCAAGGAGAGATAGCCGCAGTGGCGCAGA
ATCTTGCACATCGACGTGACTCCCTCGAGATATTGGAATACCCTTTAGCA
GTTGCGGGACCATCAGTCGGTACACCCCTTCAGGTCGGGGTGACCACTGA
CTCCGCGGAAGATCATGATGCTGCTCGCCGACGTTCCTCCGTCCTCAATC
GCATCCCTGACAACCCGGGGAAAGGCGTCGATCGGTTCTTAAGCCCGAGG
ACACTGTTGGCAAGCAAGGAGAGATAGCCGCAGTGGCGCAGAATCTTGCA
CATCGACGTGACTCCCTCGAGATATTGGAATACCCTTTAGCAGTTGCGGG
ACCATCAGTCGGTACACCCCTTCAGGTCGGGGTGACCACTGACTCCGCGG
AAGATCATGATGCTGCTCGCCGACGTTCCTCCGTCCTCAATCGCATCCCT
GACAACCTCCGAGCTCTTGTGCAGCAGTCCGATGCCAGTGGCGTGCAGCA
GAAGATGGAATCACCATATTCTCCGAGGCAAGATCAGGTGGTTGTCTCAA
AAACGGATGGGCGTGACGACACGGACGTGGTGAGTCTGCTCCGAGCTCTT
GTGCAGCAGTCCGATGCCAGTGGCGTGCAGCAGAAGATGGAATCACCATA
TTCTCCGAGGCAAGATCAGGTGGTTGTCTCAAAAACGGATGGGCGTGACG
ACACGGACGTGGTGAGTCTGACTTCCTCCATGACTCACCTTGCCGGTGGC
CACCATAAAAGCTGGTTCCAAAAAATAATGGCCTCCATACAATGGAAGAA
CTTAAAACCCAAACGGAAACAACACACGAAGGAGTCGGAATGCAAGGGGA
GAAAGGACGATAATGTGACGCCCGCGACAACCCCGAAACCGGCTATATCC
CAGGAGACACCCCCCCTGCTTCCCAAGCAGCTGTCCATCTTTGCCGGCCG
CAAAAAGACTTCCTCCATGACTCACCTTGCCGGTGGCCACCATAAAAGCT
GGTTCCAAAAAATAATGGCCTCCATACAATGGAAGAACTTAAAACCCAAA
CGGAAACAACACACGAAGGAGTCGGAATGCAAGGGGAGAAAGGACGATAA
TGTGACGCCCGCGACAACCCCGAAACCGGCTATATCCCAGGAGACACCCC
CCCTGCTTCCCAAGCAGCTGTCCATCTTTGCCGGCCGCAAAAAGTTAATC
CTGGACCTGGATGAGACGTTGGCTCATTCTTCCTTCAAGCCGGTTGTTGG
GGCGGATTTCATCCTGGACATAGACGTCGAAGGCACCCACTACAAGTTAA
TCCTGGACCTGGATGAGACGTTGGCTCATTCTTCCTTCAAGCCGGTTGTT
GGGGCGGATTTCATCCTGGACATAGACGTCGAAGGCACCCACTACAAGGT
TTTCGTTCGGATACGCCCAGGGGTGGATGAGTTCCTTCAACGAATGTCAA
GGTTGTACGAGGTGATAATTTTCACGGCAAGCCTGCCTCAGTACGCCAAC
CCTCTCCTTGACCTGGTTTTCGTTCGGATACGCCCAGGGGTGGATGAGTT
CCTTCAACGAATGTCAAGGTTGTACGAGGTGATAATTTTCACGGCAAGCC
TGCCTCAGTACGCCAACCCTCTCCTTGACCTGCTGGACCCAAGTGGATAT
ATTACATCCAGGCTTTTCCGAGAGCATTGCACTTTTCACGAGGGCTACTT
CGTCAAGCTGGACCCAAGTGGATATATTACATCCAGGCTTTTCCGAGAGC
ATTGCACTTTTCACGAGGGCTACTTCGTCAAGGACTTAATACTCCTGCGG
CACGAGAGCTTGGAATCTACCATCATCGTCGATAACTCTCCAATGGCCTA
TATGTTCCAGCCGGAAAATGCTATTGATTGCATGAGGACTTAATACTCCT
GCGGCACGAGAGCTTGGAATCTACCATCATCGTCGATAACTCTCCAATGG
CCTATATGTTCCAGCCGGAAAATGCTATTGATTGCATGAGCTGGATCGAC
GAAAAAAGTGACACCGAGCTCTACGTTATCGCCGACTTCCTTGAAGCGAT
CGTGGATGTACCGCTGGATCGACGAAAAAAGTGACACCGAGCTCTACGTT
ATCGCCGACTTCCTTGAAGCGATCGTGGATGTACCGGATGTTCGCGATCT
CCTGGAGTTCTGGCGAGAGGGGGGTAACATTCTATCAAACGAATGAGATG
TTCGCGATCTCCTGGAGTTCTGGCGAGAGGGGGGTAACATTCTATCAAAC
GAATGA
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