mRNA_H-elongata_contig15903.3813.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig15903.3813.1 vs. uniprot
Match: A0A1R3I9C6_COCAP (Uncharacterized protein n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3I9C6_COCAP) HSP 1 Score: 102 bits (254), Expect = 1.490e-18 Identity = 115/450 (25.56%), Postives = 183/450 (40.67%), Query Frame = 3
Query: 777 WVGQHERYAWLDLGAHVSHGWGPRTQALGVISPFTLPKLTEEDSAARQGW--NNLRLYPELAALAHRTASQLIVPPLLFTPAGFLGADFRPLWVPSSPARWSDYAGGATPNQWRLEEYVVVHLFLVCHTIPCPLDDAREWSGLHELFHTESRERQIGDGGIM---PRVVIKSEEVALWESSLLATGLQQALRPIRGGELSASELRSWLRRFLDERAERRRGSGDSE--RRNVGEGSSSDEARVVPVFAFMLEADPPLLLDHSTRSTSFPDMVISVKSRRGTVTDSTFQCGGQSVMLEGGLINDEKKRENSGNVDGGLLRDTFSSLAQIVWGAPPRSLSWNPLTEVLGTDYLWAAGASIDTPLSSYSSLTFAERDAYFRSYILRRVDAAVGAARDVLAEAADLNPQLATVLYPGDYIGAEDSWRSLQNILGKCLDELAVHSHESAVYYARA 2105
W G +RY W+DLGA GP + LP+ AA G + L ELA+L + L+VPPL P F E + V L V H +W+ + + F E+ DGG++ + K V E S+ + + +++ L + +LD + + S +E RR G +RV+PV+ F L+ + LLLD +S SF DMVI+V+++ T S + C G+ V + RE L R S+ Q +WG P L W+P DY W+ G + P S SSL+F ++DA R+++L ++ ++ +A DVL E+ D + +L ++ W + L K + L+ E A+YY ++
Sbjct: 229 WTGT-KRYLWIDLGA------GPVDYGPALSGDGVLPRGEFHPLAALHGRPKSEKTLLSELASLIYSAYQVLVVPPLRI-PVHF-------------------------------ENTLTVQLIHV-HASETKDLVGLDWNKIEKSFRDEAN-----DGGLLIANQTLEFKRYSVKYEECSICSFAVSRSINSYTSRFLF-DNYTLIVSEYLDSKRLHQILSDSAEEFRRVAGLPEEEFSSRVIPVYVFDLDFNTILLLDRYHQSVSFKDMVIAVRTKSAQ-TVSDYSCNGRHVFT--------RTRE--------LERPLVGSILQSMWGVSPTHLLWSPTHNSTLVDYTWSVGQTPFGPFSEISSLSFVQKDAARRNFLLTSLNYSITSAIDVL-ESVDAHGGDRNLLKQNQHVEFVQRWHLFKYKLDKVVSALSHFDFEMALYYLKS 614
BLAST of mRNA_H-elongata_contig15903.3813.1 vs. uniprot
Match: A0A2G9HFM4_9LAMI (Uncharacterized protein n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9HFM4_9LAMI) HSP 1 Score: 101 bits (251), Expect = 3.600e-18 Identity = 119/454 (26.21%), Postives = 187/454 (41.19%), Query Frame = 3
Query: 777 WVGQHERYAWLDLGAHVSHGWGPRTQALGVISPFTLPKLTEEDSAARQGWNNLRLYPELAALAHRTASQLIVPPLLFTPAGFLGADFRPLWVPSSPARWSDYAGGATPNQWRL-EEYVVVHLFLVCHTIPCPLDD-----AREWSGLHELFHTESRERQI--GDGGIMPRVVIKSEEVALWESSLLATGLQQALRPIRGGELSASELRSWLRRFLD-ERAERRRGSGDSERRNVGEGSSSDEARVVPVFAFMLEADPPLLLDHSTRSTSFPDMVISVKSRRGTVTDSTFQCGGQSVMLEGGLINDEKKRENSGNVDGGLLRDTFSSLAQIVWGAPPRSLSWNPLTEVLGTDYLWAAGASIDTPLSSYSSLTFAERDAYFRSYILRRVDAAVGAARDVLAEAADLNPQLATVLYPGDYIGAEDSWRSLQNILGKCLDELAVHSHESAVYYARALE 2111
W G+ ERY W+DLGA GP + LPK + LAAL R SQ +L A + + ++ L VPS P + +L E++ +H DD +W + F E +R + GD + K+ EV L E S+ + + +A L + +LD +R + E R VG+ D RV+PV+ F L+A+ LLLD +S +F DMVI+V+++ T T S + C G V + RE L R S+ Q +WG P L W+P DY W+ G + P S SSL+F ++DA R+++L ++ ++ + DVL A +L + W + L K + ++ ++E A+YY R+ +
Sbjct: 252 WTGK-ERYLWIDLGA------GPVDYGPALSGDGVLPKGE---------------FHPLAALHGRPKSQKA---MLSDLASLVWSAYQVLLVPSLRI--------PVPFENKLIVEFIHIH------------DDRFSGVGLDWKSVERTFMDEVNDRGLLLGDQSLS----FKNYEVKLSECSICSFAIARATTSYTSRYLF-DNYTLIVSEYLDSKRLHQTILESVDEFRRVGKLPEEDFGRVLPVYVFDLDANTILLLDRYHQSVAFKDMVIAVRTK-STQTVSDYSCNGHHVFTQ--------TRE--------LERPLVGSILQSMWGVSPTHLVWSPRHNSSLVDYTWSVGQTPFGPFSEISSLSFVQKDAARRNFLLTSLNYSITSGIDVLESIAAHGGDR-KLLKQNRHAEFLQRWNLFRYKLDKSISAMSHFNYEMALYYLRSAD 637
BLAST of mRNA_H-elongata_contig15903.3813.1 vs. uniprot
Match: A0A6J1BH37_9ROSI (LOW QUALITY PROTEIN: uncharacterized protein LOC110426669 n=3 Tax=Byttnerioideae TaxID=214909 RepID=A0A6J1BH37_9ROSI) HSP 1 Score: 100 bits (248), Expect = 7.700e-18 Identity = 112/451 (24.83%), Postives = 180/451 (39.91%), Query Frame = 3
Query: 777 WVGQHERYAWLDLGAHVSHGWGPRTQALGVISPFTLPKLTEEDSAARQGW--NNLRLYPELAALAHRTASQLIVPPLLFTPAGFLGADFRPLWVPSSPARWSDYAGGATPNQWRLEEYVVVHLFLVCHTIPCPLDDAREWSGLHELFHTESRERQIGDGGIMPRVVIKSEEVALWESSLLATGLQQALRPIRGGELSASELRSWLRRFLDERAERRRGSGDSE--RRNVGEGSSSDEARVVPVFAFMLEADPPLLLDHSTRSTSFPDMVISVKSRRGTVTDSTFQCGGQSVMLEGGLINDEKKRENSGNVDGGLLRDTFSSLAQIVWGAPPRSLSWNPLTEVLGTDYLWAAGASIDTPLSSYSSLTFAERDAYFRSYILRRVDAAVGAARDVL----AEAADLNPQLATVLYPGDYIGAEDSWRSLQNILGKCLDELAVHSHESAVYYARA 2105
W G+ +RY W+DLGA GP + LP+ AA G + L ELA+L + L+VPPL P F E + F+ H +W+ + + F E+ + ++ G + K V E S+ + + +++ L + +LD + + S +E RR G +RV+PV+ F L+ + LLLD +S +F DMVI+V+++ T S + C G+ V + RE L R S+ Q +WG P L W+P DY W+ G + P S SSL+F ++DA R+++L ++ ++ +A DVL A D N +L ++ W + L K + L+ E A YY R+
Sbjct: 221 WTGK-KRYLWIDLGA------GPVDYGPALSGDGVLPRGEFHPLAALHGRPKSEKALLSELASLIYSAYQVLVVPPLRI-PVHF--------------------------------ENTLTVQFIHVHASESKDSSGLDWNEIIKTFQDEANDGELLFGN--QSLEFKRYSVRYEECSICSFAVSRSINSYTSRFLF-DNYTLIVSEYLDSKRLHQILSDSAEEFRRVAGLPEEEFGSRVLPVYVFDLDYNTILLLDRYHQSVAFKDMVIAVRTKTAQ-TVSDYSCNGRHVFT--------RMRE--------LERPLVGSILQSMWGVSPTHLLWSPTHNSTLVDYTWSVGQTPFGPFSEISSLSFVQKDAARRNFLLTSLNYSITSAIDVLESIVAHGGDRN-----LLKQNQHVEFIQRWHLFRYKLDKAVSSLSHFDFEMAFYYIRS 606
BLAST of mRNA_H-elongata_contig15903.3813.1 vs. uniprot
Match: A0A6P5YKB6_DURZI (uncharacterized protein LOC111292394 n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5YKB6_DURZI) HSP 1 Score: 97.8 bits (242), Expect = 4.140e-17 Identity = 113/451 (25.06%), Postives = 183/451 (40.58%), Query Frame = 3
Query: 777 WVGQHERYAWLDLGAHVSHGWGPRTQALGVISPFTLPKLTEEDSAARQGW--NNLRLYPELAALAHRTASQLIVPPLLFTPAGFLGADFRPLWVPSSPARWSDYAGGATPNQWRLEEYVVVHLFLVCHTIPCPLDDAREWSGLHELFHTESRERQIGDGGIMPRVVIKSEEVALWESSLLATGLQQALRPIRGGELSASELRSWLRRFLDERAERRRGSGDSE--RRNVGEGSSSDEARVVPVFAFMLEADPPLLLDHSTRSTSFPDMVISVKSRRGTVTDSTFQCGGQSVMLEGGLINDEKKRENSGNVDGGLLRDTFSSLAQIVWGAPPRSLSWNPLTEVLGTDYLWAAGASIDTPLSSYSSLTFAERDAYFRSYILRRVDAAVGAARDVL----AEAADLNPQLATVLYPGDYIGAEDSWRSLQNILGKCLDELAVHSHESAVYYARA 2105
W G+ +RY W+DLGA GP + LP+ AA G + L ELA+L + L+VPPL P++ E + V L V HT +W+ + + F E+ + ++ G + K V E S+ + + +++ L + +LD + + S +E RR G +RV+PV+ F L+ + LLLD +S +F DMVI+V+++ T S + C G+ V + RE L R S+ Q +WG P L W+P DY W+ G + P S SSL+F ++DA R+++L ++ ++ +A DVL A D N +L ++ W L+ L K + L+ + A Y R+
Sbjct: 229 WTGK-KRYLWIDLGA------GPVDYGPAISGDGLLPRGEFHPLAALHGRPKSERALLTELASLIYSAYQVLVVPPLRI-----------PVYF---------------------ENTLTVQLIHV-HTSESKDLSGLDWNEIEKTFRNEANDGELLFGN--QSLEFKRYSVRYEECSICSFAVSRSINSYTSRFLF-DNYTLIVSEYLDSKRLHQILSDSAEEFRRVAGLPEEEFGSRVLPVYVFDLDYNTILLLDRYHQSVAFRDMVIAVRTKTAQ-TVSDYSCNGRHVFT--------RTRE--------LERPLVGSILQSMWGVSPTHLLWSPTHNSTLVDYTWSVGQTPFGPFSEISSLSFVQKDAARRNFLLTSLNYSITSAIDVLESVAAHGGDRN-----LLKQNQHVEFIQRWHLLRYKLDKAVSALSRFDFDMAFYCLRS 614
BLAST of mRNA_H-elongata_contig15903.3813.1 vs. uniprot
Match: A0A7J9GPT6_9ROSI (Uncharacterized protein n=3 Tax=Gossypium TaxID=3633 RepID=A0A7J9GPT6_9ROSI) HSP 1 Score: 95.5 bits (236), Expect = 1.340e-16 Identity = 111/447 (24.83%), Postives = 182/447 (40.72%), Query Frame = 3
Query: 777 WVGQHERYAWLDLGAHVSHGWGPRTQALGVISPFTLPKLTEEDSAARQGW--NNLRLYPELAALAHRTASQLIVPPLLFTPAGFLGADFRPLWVPSSPARWSDYAGGATPNQWRLEEYVVVHLFLVCHTIPCPLDDAREWSGLHELFHTESRERQIGDGGIMPRVVIKSEEVALWESSLLATGLQQALRPIRGGELSASELRSWLRRFLDERAERRRGSGDSE--RRNVGEGSSSDEARVVPVFAFMLEADPPLLLDHSTRSTSFPDMVISVKSRRGTVTDSTFQCGGQSVMLEGGLINDEKKRENSGNVDGGLLRDTFSSLAQIVWGAPPRSLSWNPLTEVLGTDYLWAAGASIDTPLSSYSSLTFAERDAYFRSYILRRVDAAVGAARDVLAEAADLNPQLATVLYPGDYIGAEDSWRSLQNILGKCLDELAVHSHESAVYYARA 2105
W G ++RY W+DLGA GP + LP+ AA G + L +LA+L + L+VPPL P F N +E ++H+ + LD W + + F E+ + ++ G + K V E S+ + + +++ L + +LD + + S +E RR G +RV+PV+ F L+ LLLD +S +F DMVI+V++R T S + C G+ V + RE L R S+ Q +WG P L W+P DY W+ G + P S SL+F ++DA R+++L ++ ++ +A DVL E+ D + +L ++ W + L K + L+ E A YY ++
Sbjct: 85 WTG-NKRYLWIDLGA------GPVDYGPALSGDGVLPRGEFHPLAAAHGRPKSEKTLLADLASLIYSAYQVLVVPPLRI-PVHF-------------------------ENTLTVE---LIHIHASENVDSSGLD----WKEIEKSFRNEANDGELLFGN--QSLEFKRYSVNYEECSICSFAVSRSINSFTSRFLF-DNYTLIVSEYLDSKRLHQILSDSAEEFRRVAGLPEEEFGSRVLPVYVFDLDYHTILLLDRYHQSIAFRDMVIAVRTRTAQ-TVSDYSCNGRHVFT--------RTRE--------LQRPLVGSILQSMWGVSPTHLLWSPTHNSTLVDYTWSVGQTPFGPFSEVMSLSFVQKDAARRNFLLTSLNYSLTSAIDVL-ESIDAHGGDRNLLKQKQHVEFIQRWHLFRYKLDKAVSALSHFDFEMAFYYIKS 470
BLAST of mRNA_H-elongata_contig15903.3813.1 vs. uniprot
Match: A0A1U8I3T0_GOSHI (uncharacterized protein LOC107892335 n=19 Tax=Gossypium TaxID=3633 RepID=A0A1U8I3T0_GOSHI) HSP 1 Score: 94.7 bits (234), Expect = 3.780e-16 Identity = 111/447 (24.83%), Postives = 182/447 (40.72%), Query Frame = 3
Query: 777 WVGQHERYAWLDLGAHVSHGWGPRTQALGVISPFTLPKLTEEDSAARQGW--NNLRLYPELAALAHRTASQLIVPPLLFTPAGFLGADFRPLWVPSSPARWSDYAGGATPNQWRLEEYVVVHLFLVCHTIPCPLDDAREWSGLHELFHTESRERQIGDGGIMPRVVIKSEEVALWESSLLATGLQQALRPIRGGELSASELRSWLRRFLDERAERRRGSGDSE--RRNVGEGSSSDEARVVPVFAFMLEADPPLLLDHSTRSTSFPDMVISVKSRRGTVTDSTFQCGGQSVMLEGGLINDEKKRENSGNVDGGLLRDTFSSLAQIVWGAPPRSLSWNPLTEVLGTDYLWAAGASIDTPLSSYSSLTFAERDAYFRSYILRRVDAAVGAARDVLAEAADLNPQLATVLYPGDYIGAEDSWRSLQNILGKCLDELAVHSHESAVYYARA 2105
W G ++RY W+DLGA GP + LP+ AA G + L +LA+L + L+VPPL P F N +E ++H+ + LD W+ + + F E+ + ++ G + K V E S+ + + ++ L + +LD + + S +E RR G +RV+PV+ F L+ LLLD +S +F DMVI+V++R T S + C G+ V + RE L R S+ Q +WG P L W+P DY W+ G + P S SL+F ++DA R+++L ++ ++ +A DVL E+ D + +L ++ W + L K + L+ E A YY ++
Sbjct: 228 WTG-NKRYLWIDLGA------GPVDYGPALSGDGVLPRGEFHPLAAAHGRPKSEKTLLADLASLIYSAYQVLVVPPLRI-PVHF-------------------------ENTLTVE---LIHIHASENVDSSGLD----WNEIEKSFRNEANDGELLLGN--QSLEFKRYSVNYEECSICSFAVSRSTNSFTSRFLF-DNYTLIVSEYLDSKRLHQILSDSAEEFRRVAGLPEEEFGSRVLPVYVFDLDYHTILLLDRYHQSIAFRDMVIAVRTRTAQ-TVSDYSCNGRHVFT--------RTRE--------LQRPLVGSILQSMWGVSPTHLLWSPTRNSTLVDYTWSVGQTPFGPFSEVMSLSFVQKDAARRNFLLTSLNYSLTSAIDVL-ESIDAHGGDRNLLKQKQHVEFIQRWHLFRYKLDKAVSALSHFDFEMAFYYIKS 613
BLAST of mRNA_H-elongata_contig15903.3813.1 vs. uniprot
Match: A0A2Z7CH47_9LAMI (Uncharacterized protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7CH47_9LAMI) HSP 1 Score: 93.2 bits (230), Expect = 1.130e-15 Identity = 114/452 (25.22%), Postives = 183/452 (40.49%), Query Frame = 3
Query: 777 WVGQHERYAWLDLGAHVSHGWGPRTQALGVISPFTLPKLTEEDSAARQGW--NNLRLYPELAALAHRTASQLIVPPLLFTPAGFLGADFRPLWVPSSPARWSDYAGGATPNQWRLEEYVVVHLFLVCHTIPCPLDDAR---EWSGLHELFHTESRERQIGDGGIM---PRVVIKSEEVALWESSLLATGLQQALRPIRGGELSASELRSWLRRFLD-ERAERRRGSGDSERRNVGEGSSSDEARVVPVFAFMLEADPPLLLDHSTRSTSFPDMVISVKSRRGTVTDSTFQCGGQSVMLEGGLINDEKKRENSGNVDGGLLRDTFSSLAQIVWGAPPRSLSWNPLTEVLGTDYLWAAGASIDTPLSSYSSLTFAERDAYFRSYILRRVDAAVGAARDVLAEAADLNPQLATVLYPGDYIGAEDSWRSLQNILGKCLDELAVHSHESAVYYARA 2105
W G+ +RY W+DLGA GP + LPK A G + L +LA+L +A Q+++ P L P F A + E V +H HT DD+ +W + F + + D G++ + + EV E ++ + + +A L + +LD +R + E R V + D RV+PV+ F LE + LLLD +S +F DMVI+V+++ T T S + C G + K RE L R S+ Q +WG P L W+P DY W+ G + P S SSL+F ++DA R+++L ++ ++ +A DVL E+ + +L + W + L K + L+ +E +YY R+
Sbjct: 224 WTGK-DRYLWIDLGA------GPVDYGPALSGDGVLPKGEFHPFATLHGRPKSQKSLLSDLASLVW-SAYQVLLVPSLRIPVPFESA--------------------------LVVELVHIH---GSHT-----DDSNLGLDWKSIERTFMDK-----VNDNGLLLGEQSLSFRKYEVKFSECAICSFAIARATTSYTSRYLF-DNYTLIVSEYLDSKRLHQTISESVDEFRRVAKLPEEDLGRVLPVYIFDLEVNTILLLDRYHQSVAFKDMVIAVRTK-STHTVSDYNCNGHHMFT--------KTRE--------LERPIVGSILQSMWGISPTHLVWSPRHNSTLVDYTWSVGQTPFGPFSDLSSLSFVQKDAARRNFLLTSLNYSITSAIDVL-ESITAHGGDRKLLKQYRHTEFLQRWNLFRYKLDKVISALSHFDYEMGLYYQRS 609
BLAST of mRNA_H-elongata_contig15903.3813.1 vs. uniprot
Match: A0A7N0V0L9_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0V0L9_KALFE) HSP 1 Score: 90.5 bits (223), Expect = 5.530e-15 Identity = 104/400 (26.00%), Postives = 164/400 (41.00%), Query Frame = 3
Query: 762 CGYVGWVGQHERYAWLDLGAHVSHGWGPRTQALGVISPFTLPKLTEEDSAARQGWNNLRLYPELAALAHRTASQLIVPPLLFTPAGFLGADFRPLWVPSSPARWSDYAGGATPNQWRLEEYVVVHLFLVCHTIPCPLDDAR--EWSGLHELFHTESRERQIGDGGIM---PRVVIKSEEVALWESSLLATGLQQALRPIRGGELSASELRSWLRRFLDERAERRRGSGDSER-RNVGEGSSSDEARVVPVFAFMLEADPPLLLDHSTRSTSFPDMVISVKSRRGTVTDSTFQCGGQSVMLEGGLINDEKKRENSGNVDGGLLRDTFSSLAQIVWGAPPRSLSWNPLTEVLGTDYLWAAGASIDTPLSSYSSLTFAERDAYFRSYILRRVDAAVGAARDVL 1943
C W G+ ERY W+DLGA GP G+ LP+ AA G R+ E A LA + + +L TP+ + F E +VV H + D + ++ + +F E+ G+GG++ + KS + E ++ A + +A L + + +LD + + S +E+ R V + RV+PV+ F L+ LLLD +S SF DMVI+V+++ T S + C G+ V RE L R S+ Q +WG P LSW+P DY W+ G + P S S+L+F ++DA R++IL + ++ +A DVL
Sbjct: 95 CSGTIWTGK-ERYLWIDLGA------GPVDYGPGLSGDGVLPRGEFHPLAAAHG----RVKSEKAMLADVASLVVSAYQVLLTPSLRIPVPF--------------------------ENSLVVQFV---HVYSSGVKDVQGLDFKNIERMFVEEA-----GNGGLLLGDQTLNFKSYSIDYTECAVCAFAISRATNSYTSRFLF-NNYTLIVSEYLDSKKLHQVLSDSAEQIRGVAGIPEEEYGRVLPVYVFDLDYSSLLLLDRYHQSVSFKDMVIAVRTKNSQ-TVSDYSCNGRHVFTH--------TRE--------LERPLIGSILQSMWGVSPTHLSWSPRHNNTLVDYTWSVGQTPFGPFSEVSALSFVQKDAAKRNFILTFFNNSITSAVDVL 431
BLAST of mRNA_H-elongata_contig15903.3813.1 vs. uniprot
Match: A0A6A2YBW2_HIBSY (FACT complex subunit SSRP1-like n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2YBW2_HIBSY) HSP 1 Score: 89.0 bits (219), Expect = 2.410e-14 Identity = 111/448 (24.78%), Postives = 177/448 (39.51%), Query Frame = 3
Query: 777 WVGQHERYAWLDLGAHVSHGWGPRTQALGVISPFTLPKLTEEDSAARQGW--NNLRLYPELAALAHRTASQLIVPPLLFTPAGFLGADFRPLWVPSSPARWSDYAGGATPNQWRLEEYVVVHLFLVCHTIPCPLDDAREWSGLHELFHTESRERQIGDGGIMPRVVIKSEEVALWESSLLATGLQQALRPIRGGELSASELRSWLRRFLDERAERRRGSGDSE--RRNVGEGSSSDEARVVPVFAFMLEADPPLLLDHSTRSTSFPDMVISVKSRRG-TVTDSTFQCGGQSVMLEGGLINDEKKRENSGNVDGGLLRDTFSSLAQIVWGAPPRSLSWNPLTEVLGTDYLWAAGASIDTPLSSYSSLTFAERDAYFRSYILRRVDAAVGAARDVLAEAADLNPQLATVLYPGDYIGAEDSWRSLQNILGKCLDELAVHSHESAVYYARA 2105
W G +RY W+DLGA GP + LP+ AA G ++ ELA+L + L+VPPL P F E + V L + H EW+ + + F E+ + ++ G + K V E S+ + + ++ L + +LD + + S +E RR +RV+PV+ F L+ LLLD ++ +F DMVI+V+++ TV D + C G+ V + RE L R S+ Q +WG P L W+P DY W+ G + P S SSL+F ++DA R++IL ++ ++ +A DVL E+ D +L + W + L K + L+ E A YY ++
Sbjct: 234 WTGS-KRYLWIDLGA------GPVDYGPALSGDGVLPRGEFHPLAALHGRPKSDKAFLSELASLIYSAYQVLVVPPLRI-PVHF-------------------------------ENSLTVQLIHI-HRSGSEDLSGLEWNVIEKSFRDEANDGELLFGS--QSLEFKKYSVKYEECSICSFAVSRSTNSFTSRFLF-DNYTLIVNEYLDSKRLHQILSDSAEEFRRVAALPEEDFGSRVLPVYVFDLDYHTTLLLDRYHQTIAFRDMVIAVRTKIAQTVGD--YSCNGRHVFT--------RTRE--------LQRPLVGSILQSMWGVSPTHLIWSPTHNSTLVDYTWSVGQTPFGPFSEVSSLSFVQKDAARRNFILTSLNYSLTSAIDVL-ESIDAQGGDRNLLKQKQNVEFIQRWNLFRYKLDKTVSSLSHFDFEMAFYYLKS 619
BLAST of mRNA_H-elongata_contig15903.3813.1 vs. uniprot
Match: A0A6A3CXR0_HIBSY (Ethylene-responsive transcription factor WRI1-like n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3CXR0_HIBSY) HSP 1 Score: 82.0 bits (201), Expect = 3.230e-12 Identity = 65/231 (28.14%), Postives = 104/231 (45.02%), Query Frame = 3
Query: 1425 SGDSERRNVGEGSSSDEARVVPVFAFMLEADPPLLLDHSTRSTSFPDMVISVKSRRGTVTDSTFQCGGQSVMLEGGLINDEKKRENSGNVDGGLLRDTFSSLAQIVWGAPPRSLSWNPLTEVLGTDYLWAAGASIDTPLSSYSSLTFAERDAYFRSYILRRVDAAVGAARDVL----AEAADLNPQLATVLYPGDYIGAEDSWRSLQNILGKCLDELAVHSHESAVYYARA 2105
S + RR G +RV+PV+ F L+ LLLD ++ +F DMVI+V+++ T S + C G+ V + RE L R S+ Q +WG P L W+ + DY W+ G + P S SSL+F ++DA R++IL ++ ++ + DVL A D N L ++ W + L K + L+ + A YY ++
Sbjct: 374 SAEEFRRVAGLPEEDFGSRVLPVYVFDLDYHSTLLLDRYHQTIAFRDMVIAVRTKTAQ-TVSDYSCNGRHVFT--------RTRE--------LQRPLVGSILQSMWGVSPTHLIWSSMHNSTLVDYTWSVGQTPFGPFSEVSSLSFVQKDAARRNFILTSLNYSLISVIDVLESIDAHGGDKN------LKQKQHVEFIQRWNLFRYKLDKTVSALSHFDFDMAFYYLKS 581 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15903.3813.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15903.3813.1 >prot_H-elongata_contig15903.3813.1 ID=prot_H-elongata_contig15903.3813.1|Name=mRNA_H-elongata_contig15903.3813.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=762bp MVQWLDEAEVHVMVNVVLVGFRKTGGGEGWDHVTLDEATLRQHLRELVRGback to top mRNA from alignment at H-elongata_contig15903:1846..5322+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig15903.3813.1 ID=mRNA_H-elongata_contig15903.3813.1|Name=mRNA_H-elongata_contig15903.3813.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3477bp|location=Sequence derived from alignment at H-elongata_contig15903:1846..5322+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig15903:1846..5322+ >mRNA_H-elongata_contig15903.3813.1 ID=mRNA_H-elongata_contig15903.3813.1|Name=mRNA_H-elongata_contig15903.3813.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4572bp|location=Sequence derived from alignment at H-elongata_contig15903:1846..5322+ (Himanthalia elongata Himel1 dioecious)back to top |