mRNA_H-elongata_contig158737.3800.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig158737.3800.1
Unique NamemRNA_H-elongata_contig158737.3800.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig158737.3800.1 vs. uniprot
Match: D7FUC2_ECTSI (Similar to sideroflexin 5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUC2_ECTSI)

HSP 1 Score: 348 bits (892), Expect = 1.640e-117
Identity = 181/233 (77.68%), Postives = 202/233 (86.70%), Query Frame = 1
Query:   28 AQDVPPFSKDGPRYDMSTFVGRTLHFYSVNDPRTLLSSEEDIRNAKELLRLYDEGEAPPGTKEDDLWKARRVLEASLHPDTGEAIFPLFRFSAFVPVNMFIVTATVAPVVLNSFPATASIHFVNQTYNAAINYANRNASNPVSPARLAEGYAGAVATSLAIGLTATALTKRVTARGGG--GAAANIIRCTLPFLATSMAGASNVFLMRRNELTTGVDVFDDDGKDLGKSVEVG 720
            AQ+VPPF ++GPRYDMSTFVGR LHFYSVNDPRTLL ++ED ++A++LL+L D GEAP GT + DLW ARRVLE++LHPDTGE IFPLFRFSAFVPVNM IVTATV P V++SFPATA IHF+NQTYNAAINYANRNASNPV  ARL EGYAGAV TSL+IG+ +TALTKRV AR GG  G AA IIR TLPFLA + AGASNV LMRRNELTTGVDVFDD+GKDLGKSVE G
Sbjct:   12 AQEVPPFRREGPRYDMSTFVGRMLHFYSVNDPRTLLFTDEDTKSAEKLLKLADIGEAPEGTTDADLWHARRVLESALHPDTGEPIFPLFRFSAFVPVNMVIVTATVTPAVISSFPATAFIHFLNQTYNAAINYANRNASNPVPRARLVEGYAGAVITSLSIGMLSTALTKRVAARAGGAGGPAAAIIRSTLPFLAVAGAGASNVLLMRRNELTTGVDVFDDEGKDLGKSVEAG 244          
BLAST of mRNA_H-elongata_contig158737.3800.1 vs. uniprot
Match: A0A836CEG4_9STRA (Tricarboxylate carrier-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEG4_9STRA)

HSP 1 Score: 276 bits (705), Expect = 3.060e-86
Identity = 146/232 (62.93%), Postives = 175/232 (75.43%), Query Frame = 1
Query:   13 KEIELAQDVPPFSKDGPRYDMSTFVGRTLHFYSVNDPRTLLSSEEDIRNAKELLRLYDEGEAPPGTKEDDLWKARRVLEASLHPDTGEAIFPLFRFSAFVPVNMFIVTATVAPVVLNSFPATASIHFVNQTYNAAINYANRNASNPVSPARLAEGYAGAVATSLAIGLTATALTKRVTARGGGGAAANIIRCTLPFLATSMAGASNVFLMRRNELTTGVDVFDDDGKDLGKS 708
            K+++ A+  PPFS + PRYD+ +FVGR+LHFYSVNDPRTLL S +D++ +  LL  Y  G  P G  +  LW ARR++E+++HPDT + I P  RFSAFVP+NMFIVTAT+AP V+ SF AT  IH VNQTYNAAINYANRNASNPVS  RL EGYAGAVATSL IGL+ATALT+R  A      AA +IR TLPFLAT+ AG +NV LMRRNEL  GVD+FD +G   GKS
Sbjct:  250 KQLKAAEATPPFSLEKPRYDLDSFVGRSLHFYSVNDPRTLLCSSDDLKASMALLESYKAGTLPAGIGDQQLWAARRLIESAIHPDTKQPIPPYLRFSAFVPINMFIVTATLAPAVIGSFAATGCIHLVNQTYNAAINYANRNASNPVSTQRLMEGYAGAVATSLTIGLSATALTRR--ASRWTPLAAGLIRSTLPFLATAGAGFANVALMRRNELVEGVDMFDAEGNMRGKS 479          
BLAST of mRNA_H-elongata_contig158737.3800.1 vs. uniprot
Match: F2UI50_SALR5 (Sideroflexin 5 n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UI50_SALR5)

HSP 1 Score: 182 bits (461), Expect = 1.660e-52
Identity = 100/234 (42.74%), Postives = 140/234 (59.83%), Query Frame = 1
Query:   31 QDVPPFSKDGP-RYDMSTFVGRTLHFYSVNDPRTLLSSEEDIRNAKELLRLYDEGEAPPGTKEDDLWKARRVLEASLHPDTGEAIFPLFRFSAFVPVNMFIVTATVAPVVLNSFPATASIHFVNQTYNAAINYANRNASNPVSPARLAEGYAGAVATSLAIGLTATALTKRVTARGGGGAAANII---RCTLPFLATSMAGASNVFLMRRNELTTGVDVFDDDGKDLGKSVEVG 720
            + +PPFS   P R+D+ST++GR  HFY+  DP TLL S+  I  AK L+  +  G   P      LWKAR++ +++LHPDTGE IFPLFRFSAF P N+ I    + P     F  TA   F+NQTYN  +NYANRNAS+ +S + L   Y  AV +S  + L    +++ + AR GG  +  ++   R  +P+LA   AG  N+  +R+ E + GV V+ + G+DLGKSV  G
Sbjct:    6 ESMPPFSLAAPSRFDLSTYLGRVKHFYNTTDPSTLLYSKSKIMEAKALMESFKHGTVDPSVTNTQLWKARKLCDSALHPDTGELIFPLFRFSAFAPANIPIAAMLLYPTANPYFIITAQ--FINQTYNVCVNYANRNASSNMSTSTLLTAYGAAVTSSCGLALGFGKISRMLAARAGGSPSPLMVAAQRAVVPYLAVVGAGIVNLLCIRQTEFSEGVTVYSEGGEDLGKSVVAG 237          
BLAST of mRNA_H-elongata_contig158737.3800.1 vs. uniprot
Match: A9V5X8_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V5X8_MONBE)

HSP 1 Score: 183 bits (465), Expect = 3.100e-50
Identity = 104/229 (45.41%), Postives = 146/229 (63.76%), Query Frame = 1
Query:   40 PPFSKDGP-RYDMSTFVGRTLHFYSVNDPRTLLSSEEDIRNAKELLRLYDEGEAPPGTKEDDLWKARRVLEASLHPDTGEAIFPLFRFSAFVPVNMFIVTATVAPVVLNSFPATASIHFVNQTYNAAINYANRNASNPVSPARLAEGYAGAVATSLAIGLTATALTKRVTA-RGGGGAAANIIRCTLPFLATSMAGASNVFLMRRNELTTGVDVFDDDGKDLGKSVEVG 720
            PPFS   P +YD+ST++GR   FY + DPRTLL+++ +   AK  +  +  G+ P G  +  LW+AR+++EA++HPDTGE +FPLFRFSAF   N+ I    + P     F   A   +VNQTYN AINYANRNAS+ +S   LA  Y+ AVA+S A+ L   A+T+R+ A +   GA   I R  +P++A   AG  N+  +R+ EL  GV VFD +G++LGKSV+ G
Sbjct:   52 PPFSLTRPSQYDLSTYLGRVKQFYRLTDPRTLLATDTEFEQAKSWMDRFRAGDRPAGVSDGQLWRARQLVEATVHPDTGEKVFPLFRFSAFAVANLPICALLLYPTTNPLFIMGAQ--WVNQTYNVAINYANRNASSEMSMTTLAGAYSAAVASSCALALGTQAVTRRIFAGKPMTGATQAITRSLVPYIAVVGAGIVNLVCIRQKELFEGVTVFDGEGRELGKSVKAG 278          
BLAST of mRNA_H-elongata_contig158737.3800.1 vs. uniprot
Match: A0A1D1V8T4_RAMVA (Sidoreflexin n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1V8T4_RAMVA)

HSP 1 Score: 172 bits (437), Expect = 6.900e-49
Identity = 91/227 (40.09%), Postives = 142/227 (62.56%), Query Frame = 1
Query:   28 AQDVPPFSKDGPRYDMSTFVGRTLHFYSVNDPRTLLSSEEDIRNAKELLRLYDEGEAPPGTKEDDLWKARRVLEASLHPDTGEAIFPLFRFSAFVPVNMFIVTATVAPVVLNSFPATASIHFVNQTYNAAINYANRNASNPVSPARLAEGYAGAVATSLAIGLTATALTKRVTARGGGGAAANIIRCTLPFLATSMAGASNVFLMRRNELTTGVDVFDDDGKDLGKS 708
            +++   F     RYD+ST+ GR  HF+++ DPRTLL+++E +R A++LL  Y +G  PPG   ++LW+A+++++A +HPDTGE IF  FR S +VP    IV   + P    S P+     ++NQ++NA +N++NRNA+ P   A+  EGY GAV +++ I +    L  R  A+    A   +I+  +PF A ++A   NVFLMRR EL TG++V+D + K +G S
Sbjct:   18 SRETDAFQLGKSRYDLSTYTGRVRHFFNIIDPRTLLTTDEQLRKAQDLLNAYRDGRLPPGVTNEELWQAQKIVQAIIHPDTGEKIFMPFRMSGYVPFGSPIVAGMLLP--NPSLPSIIFWQWLNQSHNACVNFSNRNATRPTPTAKFIEGYLGAVTSAVGIAVGLNQLITR--AKSLTPARRLLIQKFVPFPAVAVANVCNVFLMRRQELNTGIEVYDKNKKVIGTS 240          
BLAST of mRNA_H-elongata_contig158737.3800.1 vs. uniprot
Match: V3Z355_LOTGI (Sidoreflexin n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3Z355_LOTGI)

HSP 1 Score: 168 bits (426), Expect = 2.170e-47
Identity = 97/229 (42.36%), Postives = 138/229 (60.26%), Query Frame = 1
Query:   34 DVPPFSKDGPRYDMSTFVGRTLHFYSVNDPRTLLSSEEDIRNAKELLRLYDEGEAPPGTKEDDLWKARRVLEASLHPDTGEAIFPLFRFSAFVPVNMFIVTATVAPVVLNSFPATASIHF---VNQTYNAAINYANRNASNPVSPARLAEGYAGAVATSLAIGLTATALTKRVTARGGGGAAANIIRCTLPFLATSMAGASNVFLMRRNELTTGVDVFDDDGKDLGKSV 711
            D P F  + PR+D STF GR  HF  + DP TLL+SE+ ++ + +LL  Y +G+ PPGT+++DLWKA+++ +A +HPDTGE I   FR S +VP    +V   + P      P+  S+ F   +NQ++NA +NY+NRNAS P    R   GY GAV +++ I L    L K+  A     A   +I+  +PF A + A   NV LMR NEL+ G+DV D DGK +G S+
Sbjct:    7 DWPAFRLNKPRFDQSTFSGRLRHFLDIIDPSTLLTSEKKLKESCQLLNDYKKGQLPPGTRDEDLWKAQKIKQAIIHPDTGEKILMPFRMSGYVPFGSPMVVGLLLP-----NPSITSVIFWQWLNQSHNACVNYSNRNASKPTPINRFIMGYLGAVTSAVGIALGLKNLIKK--ANRFSPATKLLIQRFVPFPAVASASVCNVVLMRNNELSEGIDVTDKDGKVVGTSL 228          
BLAST of mRNA_H-elongata_contig158737.3800.1 vs. uniprot
Match: A0A0D2UFK2_CAPO3 (Sidoreflexin n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UFK2_CAPO3)

HSP 1 Score: 167 bits (423), Expect = 7.250e-47
Identity = 97/237 (40.93%), Postives = 138/237 (58.23%), Query Frame = 1
Query:   28 AQDVPPFSKDGPRYDMSTFVGRTLHFYSVNDPRTLLSSEEDIRNAKELLRLYDEGEAPPG----TKEDDLWKARRVLEASLHPDTGEAIFPLFRFSAFVPVNMFIVTATVA--PVVLNSFPATASIHFVNQTYNAAINYANRNASNPVSPARLAEGYAGAVATSLAIGLTATALTKRVTARGGGGAAANIIRCTLPFLATSMAGASNVFLMRRNELTTGVDVFDDDGKDLGKSVEVG 720
            + +VP F+ D PRYD S F GR  HF+ + DP  LL+S+  ++ + +LL  +  G+  PG      +  +W+ARR+ EA LHPDT E I  +FR SAFVP N+ I+   +   P VLN    T    ++NQT+NA  NY+NRNA+ P S A +A  Y  A A S+   +    L KR T      A   ++R  +PF+A + AG +N++LMRR E  TG+DV D +G  +G+S E G
Sbjct:    3 SSEVPKFTLDKPRYDQSAFSGRVRHFFDLVDPMLLLTSDAKLKESVDLLAAFKAGKINPGQPGQVTDAQMWEARRIKEAILHPDTNEPIPAVFRMSAFVPANVPIIAGMLMSPPTVLN----TVMWQWINQTFNAGFNYSNRNANAPQSTAEIATAYGAASAISVGTAVGLGELVKRATNLPP--AVRGVVRTVVPFVAVASAGVANMYLMRRGEAETGIDVRDSEGNLVGRSQEAG 233          
BLAST of mRNA_H-elongata_contig158737.3800.1 vs. uniprot
Match: B3SAY8_TRIAD (Sidoreflexin n=2 Tax=Trichoplax TaxID=10227 RepID=B3SAY8_TRIAD)

HSP 1 Score: 164 bits (416), Expect = 4.710e-46
Identity = 96/226 (42.48%), Postives = 131/226 (57.96%), Query Frame = 1
Query:   40 PPFSKDGPRYDMSTFVGRTLHFYSVNDPRTLLSSEEDIRNAKELLRLYDEGEAPPGTKEDDLWKARRVLEASLHPDTGEAIFPLFRFSAFVPVNMFIVTATVAPVVLNSFPATASIHF---VNQTYNAAINYANRNASNPVSPARLAEGYAGAVATSLAIGLTATALTKRVTARGGGGAAANIIRCTLPFLATSMAGASNVFLMRRNELTTGVDVFDDDGKDLGKS 708
            PPF+    R+D STF+GR  HF  V DPRTL  SE+ ++++ +LL  Y  G+ P G   + LWKA+++ +A +HPDT E IF  FR S FVP    IV   + P      P+  SI F   +NQ++NA +NYANRNAS P   +    GY  A+ +++ I L  TA+ KR  A     A  N I+  +PF A + A   NV  MRRNEL+ G++V D DG  +G S
Sbjct:    7 PPFTLGKSRFDQSTFLGRLRHFLDVTDPRTLFVSEKQLQDSIKLLNEYKIGKLPDGVTNEQLWKAQKIKQAIIHPDTNEKIFMPFRMSGFVPFGTPIVVGLLLP-----NPSMKSIIFWQWLNQSHNACVNYANRNASKPTPTSEFVAGYFAAITSAITIALGLTAVIKR--ADRFSPATRNAIQRFVPFPAVASASVCNVLFMRRNELSRGIEVVDKDGNTVGTS 225          
BLAST of mRNA_H-elongata_contig158737.3800.1 vs. uniprot
Match: UPI001B88C8F6 (sideroflexin-5-like isoform X2 n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88C8F6)

HSP 1 Score: 163 bits (413), Expect = 5.240e-46
Identity = 94/226 (41.59%), Postives = 134/226 (59.29%), Query Frame = 1
Query:   31 QDVPPFSKDGPRYDMSTFVGRTLHFYSVNDPRTLLSSEEDIRNAKELLRLYDEGEAPPGTKEDDLWKARRVLEASLHPDTGEAIFPLFRFSAFVPVNMFIVTATVAPVVLNSFPATASIHFVNQTYNAAINYANRNASNPVSPARLAEGYAGAVATSLAIGLTATALTKRVTARGGGGAAANIIRCTLPFLATSMAGASNVFLMRRNELTTGVDVFDDDGKDLGKS 708
            Q+ PPFS D PR+D STF GR  HF +V DPRTLL+++  +  A +LL  Y  G  PPG  +  LW+A ++ ++ +HPDTG+ IF  FR S FVP    IV   + P    SF       ++NQ++NA +NYANRNAS     +R   GY GAV ++++I +  + L KR  A+    A   +I+  +PF A + A   NV LMR  EL+ G++VFD + + +G S
Sbjct:    5 QEYPPFSLDKPRFDQSTFSGRLKHFLNVIDPRTLLTTQSQLEAAIKLLDDYKAGTVPPGVSDAQLWEALKIKQSIIHPDTGKKIFMPFRMSGFVPFGSPIVVGLLLP--NQSFGQMIFWQWLNQSHNACVNYANRNASKETPMSRFFMGYFGAVTSAVSIAIGLSVLVKR--AKNFSPATKMLIQKFVPFPAVATASTCNVLLMRNYELSEGIEVFDKNKQTVGTS 226          
BLAST of mRNA_H-elongata_contig158737.3800.1 vs. uniprot
Match: K1RJ31_CRAGI (Sidoreflexin n=3 Tax=Crassostrea TaxID=6564 RepID=K1RJ31_CRAGI)

HSP 1 Score: 164 bits (414), Expect = 1.240e-45
Identity = 91/228 (39.91%), Postives = 138/228 (60.53%), Query Frame = 1
Query:   25 LAQDVPPFSKDGPRYDMSTFVGRTLHFYSVNDPRTLLSSEEDIRNAKELLRLYDEGEAPPGTKEDDLWKARRVLEASLHPDTGEAIFPLFRFSAFVPVNMFIVTATVAPVVLNSFPATASIHFVNQTYNAAINYANRNASNPVSPARLAEGYAGAVATSLAIGLTATALTKRVTARGGGGAAANIIRCTLPFLATSMAGASNVFLMRRNELTTGVDVFDDDGKDLGKS 708
            ++ + PPF     RYD STF GR  HF+ V DPRTL +SEE +++  +LL  + +G  PP     DLW+A+++ +A +HPDTGE IF  FR S FVP    +V   + P    +  +T    ++NQ++NA +NYANRNA++P   +R   GY GAV+T+++I +    L ++  A     A   +I+  +PF A + A   N+ LMR +EL+TG++V D +G  +GKS
Sbjct:    1 MSTEYPPFRLGKSRYDQSTFDGRLRHFFDVIDPRTLFTSEEKLKSCVKLLDDFSKGHLPPTVTNKDLWEAQKIKQAIIHPDTGEKIFMPFRMSGFVPFGSPMVVGLLLP--NQTIASTIFWQWINQSHNACVNYANRNATSPTPMSRFLLGYTGAVSTAVSIAVGLNLLIQK--ANKFSPATKVLIQRFVPFPAVACASTCNLLLMRNSELSTGIEVEDHNGNVIGKS 224          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig158737.3800.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUC2_ECTSI1.640e-11777.68Similar to sideroflexin 5 n=2 Tax=Ectocarpus TaxID... [more]
A0A836CEG4_9STRA3.060e-8662.93Tricarboxylate carrier-domain-containing protein n... [more]
F2UI50_SALR51.660e-5242.74Sideroflexin 5 n=1 Tax=Salpingoeca rosetta (strain... [more]
A9V5X8_MONBE3.100e-5045.41Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A1D1V8T4_RAMVA6.900e-4940.09Sidoreflexin n=1 Tax=Ramazzottius varieornatus Tax... [more]
V3Z355_LOTGI2.170e-4742.36Sidoreflexin n=1 Tax=Lottia gigantea TaxID=225164 ... [more]
A0A0D2UFK2_CAPO37.250e-4740.93Sidoreflexin n=2 Tax=Capsaspora owczarzaki (strain... [more]
B3SAY8_TRIAD4.710e-4642.48Sidoreflexin n=2 Tax=Trichoplax TaxID=10227 RepID=... [more]
UPI001B88C8F65.240e-4641.59sideroflexin-5-like isoform X2 n=1 Tax=Gigantopelt... [more]
K1RJ31_CRAGI1.240e-4539.91Sidoreflexin n=3 Tax=Crassostrea TaxID=6564 RepID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig158737contigH-elongata_contig158737:217..936 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score347.1
Seed ortholog evalue6.8e-93
Seed eggNOG ortholog2880.D7FUC2
Preferred namefsf1
KEGG koko:K09486
KEGG Pathwayko04141,map04141
GOsGO:0003674,GO:0005215,GO:0005342,GO:0005371,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006810,GO:0006811,GO:0006820,GO:0006839,GO:0006842,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015142,GO:0015291,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0031224,GO:0034220,GO:0035674,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0098656,GO:1903825,GO:1905039,GO:1990542,GO:1990546
EggNOG free text desc.ion transmembrane transporter activity
EggNOG OGsKOG3767@1,KOG3767@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03110
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTricarboxylate/iron carrier
Ec32 orthologEc-03_000790.1
Exons1
Model size720
Cds size720
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929934.8287494-CDS-H-elongata_contig158737:216..9361622929934.8287494-CDS-H-elongata_contig158737:216..936Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig158737 217..936 -
1691679213.9206636-CDS-H-elongata_contig158737:216..9361691679213.9206636-CDS-H-elongata_contig158737:216..936Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig158737 217..936 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig158737.3800.1prot_H-elongata_contig158737.3800.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig158737 217..936 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig158737.3800.1

>prot_H-elongata_contig158737.3800.1 ID=prot_H-elongata_contig158737.3800.1|Name=mRNA_H-elongata_contig158737.3800.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=240bp
MATLKEIELAQDVPPFSKDGPRYDMSTFVGRTLHFYSVNDPRTLLSSEED
IRNAKELLRLYDEGEAPPGTKEDDLWKARRVLEASLHPDTGEAIFPLFRF
SAFVPVNMFIVTATVAPVVLNSFPATASIHFVNQTYNAAINYANRNASNP
VSPARLAEGYAGAVATSLAIGLTATALTKRVTARGGGGAAANIIRCTLPF
LATSMAGASNVFLMRRNELTTGVDVFDDDGKDLGKSVEVG
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mRNA from alignment at H-elongata_contig158737:217..936-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig158737.3800.1 ID=mRNA_H-elongata_contig158737.3800.1|Name=mRNA_H-elongata_contig158737.3800.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=720bp|location=Sequence derived from alignment at H-elongata_contig158737:217..936- (Himanthalia elongata Himel1 dioecious)
ATGGCAACGCTGAAGGAGATCGAGCTCGCGCAGGACGTGCCCCCGTTCAG TAAAGATGGACCTCGCTACGATATGTCCACCTTCGTCGGGAGGACTCTCC ATTTCTACAGCGTAAATGACCCGCGCACTCTGCTGAGCTCCGAGGAAGAC ATCCGAAACGCGAAGGAGCTGCTGCGCCTGTATGACGAGGGTGAGGCCCC GCCCGGCACAAAGGAAGATGACTTATGGAAGGCACGTCGCGTGCTGGAAG CCTCGCTACACCCAGACACCGGGGAGGCGATATTCCCGCTGTTCCGATTC TCGGCGTTCGTGCCGGTGAACATGTTTATCGTCACAGCGACGGTGGCCCC TGTAGTCCTGAACAGCTTCCCGGCCACGGCCTCGATCCACTTCGTGAACC AAACCTATAACGCGGCTATCAACTATGCCAACCGCAACGCGTCCAATCCT GTCTCCCCCGCGAGGTTGGCGGAAGGATACGCGGGGGCCGTCGCGACTTC TCTCGCGATAGGCCTCACGGCTACCGCACTGACGAAGAGGGTAACCGCTC GGGGTGGCGGCGGCGCGGCGGCGAACATAATCAGGTGTACACTGCCCTTC CTGGCCACGTCTATGGCAGGCGCCAGCAACGTATTTCTGATGAGGCGGAA CGAGCTCACAACGGGGGTGGACGTCTTCGACGATGATGGCAAGGACCTTG GAAAGAGCGTGGAGGTGGGT
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Coding sequence (CDS) from alignment at H-elongata_contig158737:217..936-

>mRNA_H-elongata_contig158737.3800.1 ID=mRNA_H-elongata_contig158737.3800.1|Name=mRNA_H-elongata_contig158737.3800.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1440bp|location=Sequence derived from alignment at H-elongata_contig158737:217..936- (Himanthalia elongata Himel1 dioecious)
ATGGCAACGCTGAAGGAGATCGAGCTCGCGCAGGACGTGCCCCCGTTCAG
TAAAGATGGACCTCGCTACGATATGTCCACCTTCGTCGGGAGGACTCTCC
ATTTCTACAGCGTAAATGACCCGCGCACTCTGCTGAGCTCCGAGGAAGAC
ATCCGAAACGCGAAGGAGCTGCTGCGCCTGTATGACGAGGGTGAGGCCCC
GCCCGGCACAAAGGAAGATGACTTATGGAAGGCACGTCGCGTGCTGGAAG
CCTCGCTACACCCAGACACCGGGGAGGCGATATTCCCGCTGTTCCGATTC
TCGGCGTTCGTGCCGGTGAACATGTTTATCGTCACAGCGACGGTGGCCCC
TGTAGTCCTGAACAGCTTCCCGGCCACGGCCTCGATCCACTTCGTGAACC
AAACCTATAACGCGGCTATCAACTATGCCAACCGCAACGCGTCCAATCCT
GTCTCCCCCGCGAGGTTGGCGGAAGGATACGCGGGGGCCGTCGCGACTTC
TCTCGCGATAGGCCTCACGGCTACCGCACTGACGAAGAGGGTAACCGCTC
GGGGTGGCGGCGGCGCGGCGGCGAACATAATCAGGTGTACACTGCCCTTC
CTGGCCACGTCTATGGCAGGCGCCAGCAACGTATTTCTGATGAGGCGGAA
CGAGCTCACAACGGGGGTGGACGTCTTCGACGATGATGGCAAGGACCTTG
GAAAGAGCGTGGAGGTGGGTATGGCAACGCTGAAGGAGATCGAGCTCGCG
CAGGACGTGCCCCCGTTCAGTAAAGATGGACCTCGCTACGATATGTCCAC
CTTCGTCGGGAGGACTCTCCATTTCTACAGCGTAAATGACCCGCGCACTC
TGCTGAGCTCCGAGGAAGACATCCGAAACGCGAAGGAGCTGCTGCGCCTG
TATGACGAGGGTGAGGCCCCGCCCGGCACAAAGGAAGATGACTTATGGAA
GGCACGTCGCGTGCTGGAAGCCTCGCTACACCCAGACACCGGGGAGGCGA
TATTCCCGCTGTTCCGATTCTCGGCGTTCGTGCCGGTGAACATGTTTATC
GTCACAGCGACGGTGGCCCCTGTAGTCCTGAACAGCTTCCCGGCCACGGC
CTCGATCCACTTCGTGAACCAAACCTATAACGCGGCTATCAACTATGCCA
ACCGCAACGCGTCCAATCCTGTCTCCCCCGCGAGGTTGGCGGAAGGATAC
GCGGGGGCCGTCGCGACTTCTCTCGCGATAGGCCTCACGGCTACCGCACT
GACGAAGAGGGTAACCGCTCGGGGTGGCGGCGGCGCGGCGGCGAACATAA
TCAGGTGTACACTGCCCTTCCTGGCCACGTCTATGGCAGGCGCCAGCAAC
GTATTTCTGATGAGGCGGAACGAGCTCACAACGGGGGTGGACGTCTTCGA
CGATGATGGCAAGGACCTTGGAAAGAGCGTGGAGGTGGGT
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