mRNA_H-elongata_contig15863.3794.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig15863.3794.1 vs. uniprot
Match: D8LLC3_ECTSI (3-oxoacyl-[acyl-carrier-protein] synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLC3_ECTSI) HSP 1 Score: 135 bits (339), Expect = 4.710e-36 Identity = 73/80 (91.25%), Postives = 77/80 (96.25%), Query Frame = 1
Query: 1 ESGLSAETVGYVNAHATSTPLGDAAEMRAIEKVFGRSRQSLLVSSTKGATGHLLGAAGSLEAAFSILALRDGVVPHTVNL 240
ESGLS E+VGYVNAHATSTPLGDAAE RAIE+VFG+ RQSLLVSSTKGATGHLLGAAGSLEAAFSILALRDGVVPHT+NL
Sbjct: 324 ESGLSPESVGYVNAHATSTPLGDAAEGRAIERVFGK-RQSLLVSSTKGATGHLLGAAGSLEAAFSILALRDGVVPHTLNL 402
BLAST of mRNA_H-elongata_contig15863.3794.1 vs. uniprot
Match: A0A7R9VUQ5_9CHLO (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VUQ5_9CHLO) HSP 1 Score: 106 bits (264), Expect = 7.650e-26 Identity = 56/80 (70.00%), Postives = 66/80 (82.50%), Query Frame = 1
Query: 4 SGLSAETVGYVNAHATSTPLGDAAEMRAIEKVFGRSRQSLL-VSSTKGATGHLLGAAGSLEAAFSILALRDGVVPHTVNL 240
SG+S + V Y+NAHATSTPLGD E RAI +VFGRS + L VSSTKGATGHLLGAAG++EA F++LALRDG+ P TVNL
Sbjct: 205 SGVSVDDVAYINAHATSTPLGDEVEQRAILRVFGRSHVACLAVSSTKGATGHLLGAAGAVEALFTVLALRDGLAPPTVNL 284
BLAST of mRNA_H-elongata_contig15863.3794.1 vs. uniprot
Match: A0A067C6H8_SAPPC (Ketoacyl-synt_C domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C6H8_SAPPC) HSP 1 Score: 100 bits (249), Expect = 1.460e-25 Identity = 50/80 (62.50%), Postives = 65/80 (81.25%), Query Frame = 1
Query: 1 ESGLSAETVGYVNAHATSTPLGDAAEMRAIEKVFGRSRQSLLVSSTKGATGHLLGAAGSLEAAFSILALRDGVVPHTVNL 240
+SGL+ +GY+NAHATSTPLGDAAE RAI+++FG +L VSSTKGA GHLLGAAG++EA F+I A+ + V+P T+NL
Sbjct: 7 QSGLALSDIGYINAHATSTPLGDAAENRAIKRLFGSHAYNLGVSSTKGAVGHLLGAAGAIEAIFAIKAMHESVLPPTLNL 86
BLAST of mRNA_H-elongata_contig15863.3794.1 vs. uniprot
Match: UPI001E1D2875 (LOW QUALITY PROTEIN: 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2875) HSP 1 Score: 106 bits (264), Expect = 2.640e-25 Identity = 56/77 (72.73%), Postives = 62/77 (80.52%), Query Frame = 1
Query: 10 LSAETVGYVNAHATSTPLGDAAEMRAIEKVFGRSRQSLLVSSTKGATGHLLGAAGSLEAAFSILALRDGVVPHTVNL 240
L E+VGYVNAHATSTPLGD AE RAI K+FGR LL+SSTKGATGHLLGAAGSLEA ++LA + G VP TVNL
Sbjct: 313 LEPESVGYVNAHATSTPLGDKAESRAIFKLFGRHCDKLLISSTKGATGHLLGAAGSLEAMLTVLACQSGKVPPTVNL 389
BLAST of mRNA_H-elongata_contig15863.3794.1 vs. uniprot
Match: A0A3M1S424_9GAMM (3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1S424_9GAMM) HSP 1 Score: 105 bits (262), Expect = 4.040e-25 Identity = 55/80 (68.75%), Postives = 63/80 (78.75%), Query Frame = 1
Query: 1 ESGLSAETVGYVNAHATSTPLGDAAEMRAIEKVFGRSRQSLLVSSTKGATGHLLGAAGSLEAAFSILALRDGVVPHTVNL 240
++GL A VGYVNAH TST LGD AE RAI++VFG + Q LLVSSTK TGHLLGAAG +EA FS+LALRD VP T+NL
Sbjct: 291 DAGLDAGDVGYVNAHGTSTQLGDIAETRAIKRVFGAAAQDLLVSSTKSTTGHLLGAAGGIEAVFSVLALRDQRVPPTINL 370
BLAST of mRNA_H-elongata_contig15863.3794.1 vs. uniprot
Match: A0A2D7FNE5_9HYPH (3-oxoacyl-[acyl-carrier-protein] synthase 2 n=4 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2D7FNE5_9HYPH) HSP 1 Score: 105 bits (262), Expect = 4.360e-25 Identity = 51/79 (64.56%), Postives = 65/79 (82.28%), Query Frame = 1
Query: 4 SGLSAETVGYVNAHATSTPLGDAAEMRAIEKVFGRSRQSLLVSSTKGATGHLLGAAGSLEAAFSILALRDGVVPHTVNL 240
SGLS E +GYVNAH TSTPLGD E++A+E++FG + L +SSTK A GHLLGAAG++EA FS+LA+RDG+VP T+NL
Sbjct: 299 SGLSPEDIGYVNAHGTSTPLGDEIELKAVERLFGGAADGLNMSSTKSAIGHLLGAAGAVEAIFSVLAIRDGIVPPTLNL 377
BLAST of mRNA_H-elongata_contig15863.3794.1 vs. uniprot
Match: UPI0019CEF34F (Beta-ketoacyl-ACP synthase II n=1 Tax=Rhizobiaceae bacterium TaxID=1913961 RepID=UPI0019CEF34F) HSP 1 Score: 99.4 bits (246), Expect = 8.420e-25 Identity = 47/80 (58.75%), Postives = 63/80 (78.75%), Query Frame = 1
Query: 1 ESGLSAETVGYVNAHATSTPLGDAAEMRAIEKVFGRSRQSLLVSSTKGATGHLLGAAGSLEAAFSILALRDGVVPHTVNL 240
++G+S + VGY+NAH TSTP+GD E+RAIE++ G + +L+SSTK A GHLLGAAGS+EA F +LA+RD V P T+NL
Sbjct: 31 DAGISPDDVGYINAHGTSTPMGDELELRAIERLLGDAADGMLMSSTKSAVGHLLGAAGSVEAIFCLLAIRDNVAPPTLNL 110
BLAST of mRNA_H-elongata_contig15863.3794.1 vs. uniprot
Match: A0A5N3PAG4_9HYPH (Beta-ketoacyl-ACP synthase II (Fragment) n=1 Tax=Microvirga brassicacearum TaxID=2580413 RepID=A0A5N3PAG4_9HYPH) HSP 1 Score: 100 bits (249), Expect = 8.600e-25 Identity = 49/78 (62.82%), Postives = 62/78 (79.49%), Query Frame = 1
Query: 7 GLSAETVGYVNAHATSTPLGDAAEMRAIEKVFGRSRQSLLVSSTKGATGHLLGAAGSLEAAFSILALRDGVVPHTVNL 240
G+SA + YVNAH TSTPLGD E++A+E+V G + L +SSTK A GHLLGAAG++EA FSILA+RDG+VP T+NL
Sbjct: 76 GISASEIDYVNAHGTSTPLGDELELKAVERVVGNAAGKLTMSSTKSAIGHLLGAAGAVEAIFSILAIRDGIVPPTLNL 153
BLAST of mRNA_H-elongata_contig15863.3794.1 vs. uniprot
Match: A0A812C539_SEPPH (3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812C539_SEPPH) HSP 1 Score: 104 bits (260), Expect = 9.100e-25 Identity = 51/73 (69.86%), Postives = 61/73 (83.56%), Query Frame = 1
Query: 22 TVGYVNAHATSTPLGDAAEMRAIEKVFGRSRQSLLVSSTKGATGHLLGAAGSLEAAFSILALRDGVVPHTVNL 240
+V Y+NAHATSTPLGDAAE++AI ++FG + L +SSTKGATGHLLGAAGSLEA FSILAL G +P T+NL
Sbjct: 309 SVSYINAHATSTPLGDAAEIKAIRRLFGSHSKELFISSTKGATGHLLGAAGSLEAIFSILALHTGTIPPTINL 381
BLAST of mRNA_H-elongata_contig15863.3794.1 vs. uniprot
Match: UPI001B8C6EC6 (beta-ketoacyl-ACP synthase II n=1 Tax=Chloracidobacterium validum TaxID=2821543 RepID=UPI001B8C6EC6) HSP 1 Score: 104 bits (259), Expect = 1.080e-24 Identity = 53/80 (66.25%), Postives = 65/80 (81.25%), Query Frame = 1
Query: 1 ESGLSAETVGYVNAHATSTPLGDAAEMRAIEKVFGRSRQSLLVSSTKGATGHLLGAAGSLEAAFSILALRDGVVPHTVNL 240
++G++ VGY+NAHATSTP GDAAE RAI +VFG + SL VSSTK TGHLLGAAG+LEAA ++LALRDG +P T+NL
Sbjct: 290 DAGIAPAEVGYLNAHATSTPAGDAAEARAIRQVFGDAVSSLAVSSTKSMTGHLLGAAGALEAAITVLALRDGRIPPTINL 369 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15863.3794.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15863.3794.1 >prot_H-elongata_contig15863.3794.1 ID=prot_H-elongata_contig15863.3794.1|Name=mRNA_H-elongata_contig15863.3794.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=80bp ESGLSAETVGYVNAHATSTPLGDAAEMRAIEKVFGRSRQSLLVSSTKGATback to top mRNA from alignment at H-elongata_contig15863:1722..2847- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig15863.3794.1 ID=mRNA_H-elongata_contig15863.3794.1|Name=mRNA_H-elongata_contig15863.3794.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1126bp|location=Sequence derived from alignment at H-elongata_contig15863:1722..2847- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig15863:1722..2847- >mRNA_H-elongata_contig15863.3794.1 ID=mRNA_H-elongata_contig15863.3794.1|Name=mRNA_H-elongata_contig15863.3794.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=480bp|location=Sequence derived from alignment at H-elongata_contig15863:1722..2847- (Himanthalia elongata Himel1 dioecious)back to top |