mRNA_H-elongata_contig1583.3783.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig1583.3783.1 vs. uniprot
Match: D7FYS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS3_ECTSI) HSP 1 Score: 304 bits (778), Expect = 1.290e-102 Identity = 141/201 (70.15%), Postives = 168/201 (83.58%), Query Frame = 1
Query: 1 IEDVELNGRGVLHLRCDWAVGIGGGLWTTGLLLTQHLSEHSDVYDNVFRGKRILELGSGTGLVGLAAARFGPPREVVITDLESHLDICRINVARNSIAGGATACSIRVEKYDWNAEVPTELGAVPFDVIIGTDVAYYEHLYAPFIKALGRTVGPESLVLLGVTRTDTGPAFFDAMDKAGFEYNLVHQAAHKGFGLFSACKE 603
+++VEL+GR +W VGIGGGLW+TG+LLT+HL++H+ +YD VF+GKR+LELGSGTGLVGLAAARFGPP EVVITDLESH+DIC+ NVA G CS+RVE YDW++EVP ELG VPFDVI+ TDVAYYEHLYAPF++AL RT G +LVLLGVTRTDTGPAFFDA+DKAGF YNLV QA+HKGFGLF+ +E
Sbjct: 15 VKEVELDGRXXXXXEVNWGVGIGGGLWSTGILLTEHLAKHAALYDRVFKGKRVLELGSGTGLVGLAAARFGPPLEVVITDLESHVDICKRNVASQDDMGAQGLCSVRVEAYDWSSEVPEELGEVPFDVILATDVAYYEHLYAPFVQALERTAGQHTLVLLGVTRTDTGPAFFDALDKAGFVYNLVDQASHKGFGLFTVQRE 215
BLAST of mRNA_H-elongata_contig1583.3783.1 vs. uniprot
Match: A0A7R9UE36_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE36_9STRA) HSP 1 Score: 166 bits (420), Expect = 2.920e-48 Identity = 82/196 (41.84%), Postives = 115/196 (58.67%), Query Frame = 1
Query: 34 LHLRCDWAVGIGGGLWTTGLLLTQHLSEHSDVYDNVFRGKRILELGSGTGLVGLAAARFGPPREVVITDLESHLDICRINVARNSIAGGATACSIRVEKYDWNAEVPTELGAVPFDVIIGTDVAYYEHLYAPFIKALGRTVGPESLVLLGVTRTDTGPAFFDAMDKAGFEYNLVHQA------AHKGFGLFSACKE 603
L L DW+VGIGGG+W++ L H + Y G+R+LELG+GTGL G AA P E+V++D+ H+ + R NV +N + +RVE +DW E L PFDV+IGTDVAY+E LY A+ RT+ P+ +V+LGVTR+DTGP+FF + K GF Y+ + + FGLF+ +E
Sbjct: 23 LQLELDWSVGIGGGVWSSAEQLVAHFEAQQETYRQTLHGRRVLELGAGTGLAGFGAALVSPLSELVLSDVGEHVTLLRRNVEQNFDTLTQSGVKVRVETFDWTVEDVGHLDG-PFDVLIGTDVAYHESLYEDVANAIDRTLKPDGVVILGVTRSDTGPSFFRELVKRGFNYHRIRDEDMGGKHTNSSFGLFTVWRE 217
BLAST of mRNA_H-elongata_contig1583.3783.1 vs. uniprot
Match: W7U3Q4_9STRA (Nicotinamide N-methyltransferase, putative n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3Q4_9STRA) HSP 1 Score: 165 bits (417), Expect = 2.390e-47 Identity = 90/206 (43.69%), Postives = 122/206 (59.22%), Query Frame = 1
Query: 34 LHLRCDWAVGIGGGLWTTGLLLTQHLSEHSDVYDNVFRGKRILELGSGTGLVGLAAARFG--PPREVVITDLESHLDICRINVARNSIAGGATACSIRVEKYDWNAEVPTE--------LGAVPFDVIIGTDVAYYEHLYAPFIKALGRTVGPESLVLLGVTRTDTGPAFFDAMDKAGFEYNLVHQAAHK-------GFGLFSACK 600
L L W VGIGGG+WTTGLLL ++ ++ + V GKRI+E+GSGTGLV L+ A P+E+V+TD + HLD+ N+ N A IRV++++W + T+ L A+PFDV++GTDVAY + LY P + AL R GP SL+LLGVTRTDT P FF + + GF+Y L A + GF L S +
Sbjct: 56 LTLETQWNVGIGGGIWTTGLLLCEYFGRNATFFSKVLYGKRIIEIGSGTGLVALSLATNALFKPQEIVVTDQKDHLDLIERNICANIAKMKAP---IRVQEFNWLKDKETKNTDSKVKALCALPFDVVVGTDVAYCQELYGPVVHALCRLSGPHSLILLGVTRTDTNPRFFQLLQEEGFDYCLTPVADGESSCTVAGGFALLSVVR 258
BLAST of mRNA_H-elongata_contig1583.3783.1 vs. uniprot
Match: A0A7S1U640_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U640_9STRA) HSP 1 Score: 156 bits (394), Expect = 3.140e-44 Identity = 83/197 (42.13%), Postives = 119/197 (60.41%), Query Frame = 1
Query: 34 LHLRCDWAVGIGGGLWTTGLLLTQHLSEHSDVYDNVFRGKRILELGSGTGLVGLAAARF-GPPREVVITDLESHLDICRINVARNSIAGGATACSIRVEKYDW-NAEVPTELGAVPFDVIIGTDVAYYEHLYAPFIKALGRTVGPESLVLLGVTRTDTGPAFFDAMDKAGFEYNLVHQAAHKG------FGLFSACK 600
+ L +W VGIGGG+W+ H+ H D Y+ +RG+R++ELG+GTGL G AAA G EVV+TD+ H+++ R N+ N+ A+ S+RVE++DW A+ LG FDV++GTDVAY+E LY A+ T + +V+LGVTR DTGP+FF A + GF Y+ V ++ G F LF A +
Sbjct: 38 IQLTTNWDVGIGGGVWSAAEQFLGHVGAHRDFYEQKWRGRRVIELGAGTGLAGFAAALVAGAGAEVVLTDIGEHVEMLRENLKLNAQLMEASGASVRVEEFDWAKADEVEHLGG-KFDVVVGTDVAYHEDLYDDVAAAIDATTKDDGVVVLGVTRLDTGPSFFRAFEARGFTYHRVDESLMGGAHTKSSFALFLAWR 233
BLAST of mRNA_H-elongata_contig1583.3783.1 vs. uniprot
Match: A0A1V9ZGF1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGF1_9STRA) HSP 1 Score: 152 bits (383), Expect = 7.580e-43 Identity = 88/192 (45.83%), Postives = 109/192 (56.77%), Query Frame = 1
Query: 31 VLHLRCDWAVGIGGGLWTTGLLLTQHLSEHSDVYDNVFRGKRILELGSGTGLVGLAAARFGPPREVVITDLESHLDICRINVARNSIAGGATACSIRVEKYDWNAEVPTELGAVPFDVIIGTDVAYYEHLYAPFIKALGRTVGPESLVLLGVTRTDTGPAFFDAMDKAGFEY-----NLVHQAAH-KGFGLF 588
++ L CDW VGIGG LWT+G L+ + S H + G R+LELGSGTGLVGLA A GP V +TDL SH+ NVARN+ A +I V DWNA PT P D I+GTD+AY YAP + L R GP + +L+G+ R DT FF + AGF Y +L+ Q H K FGLF
Sbjct: 21 IVELGCDWGVGIGGSLWTSGRLMVDYFSRHEPARRQL-AGARVLELGSGTGLVGLAVALMGPAH-VALTDLASHVAALEANVARNADRIPAET-TITVSALDWNAPPPTP--DAPLDWIVGTDIAYSPAFYAPLLATLQRLAGPNTRILVGLGRHDTDRRFFQLLHDAGFSYYKVDESLMSQEFHGKDFGLF 207
BLAST of mRNA_H-elongata_contig1583.3783.1 vs. uniprot
Match: A0A2D4BZQ6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZQ6_PYTIN) HSP 1 Score: 150 bits (380), Expect = 5.280e-42 Identity = 84/208 (40.38%), Postives = 114/208 (54.81%), Query Frame = 1
Query: 19 NGRGVLHLR-----CDWAVGIGGGLWTTGLLLTQHLSEHSDVYDNVFRGKRILELGSGTGLVGLAAARFGPPREVVITDLESHLDICRINVARNSIAGGATACSIRVEKYDWNAEVPTE-----LGAVP--FDVIIGTDVAYYEHLYAPFIKALGRTVGPESLVLLGVTRTDTGPAFFDAMDKAGFEY------NLVHQAAHKGFGLF 588
+G G H R CDW VGIGG +WT+G +LT HL H + Y +F+GK ++ELGSGTG VGL AA P +VV+TDL SHLD + N+ N A +R + W + + LG D+++GTD+AY Y P + L R E+LVL+G+ R+DTG FF +++ GFEY L + K FGLF
Sbjct: 24 SGPGATHERELAFQCDWDVGIGGSVWTSGEILTAHLEMHQEQYREIFQGKSVVELGSGTGYVGLLAAACFQPAQVVLTDLASHLDCMQRNIDGNRTAV-QPGVHVRAAELCWGCDAHEDALLASLGVTGRGVDIVLGTDIAYLTEFYEPILHTLRRITHSETLVLIGLNRSDTGMQFFRRLEQEGFEYYKLSDRQLPREHRGKDFGLF 230
BLAST of mRNA_H-elongata_contig1583.3783.1 vs. uniprot
Match: A0A5D6YE76_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YE76_9STRA) HSP 1 Score: 149 bits (377), Expect = 1.960e-41 Identity = 90/201 (44.78%), Postives = 115/201 (57.21%), Query Frame = 1
Query: 34 LHLRCDWAVGIGGGLWTTGLLLTQHLSEHSDVYDNVFRGKRILELGSGTGLVGLAAARFGPPREVVITDLESHLDICRINVARNSIAGGATACSIRVEKYDW-NAEVPTELGAV---------PFDVIIGTDVAYYEHLYAPFIKALGRTVGPESLVLLGVTRTDTGPAFFDAMDKAGFEYNLV-----HQAAH-KGFGLF 588
L CDW VGIGG +WT+G +L HL +H+D Y +F GK +LELGSGTG VGL A P V++TDL +H+ NVA N+ A + +RV + W +AE L A DVIIGTDVAY LY P + +L R G ++LVLLG+ R DT AFF +++ GFEY V H+ H K FGLF
Sbjct: 31 LRFACDWDVGIGGSVWTSGQVLAGHLQQHADKYRPLFAGKCVLELGSGTGFVGLMTAVCFAPARVLLTDLATHVASLERNVALNA-ALLPPSTRVRVAELSWGSAEQEDALLASLGDGADTVDTVDVIIGTDVAYLHELYEPLLHSLRRLAGEQTLVLLGLNRADTDTAFFTRLEQDGFEYYKVPDEQLHRDYHGKDFGLF 230
BLAST of mRNA_H-elongata_contig1583.3783.1 vs. uniprot
Match: A0A1V9ZYN4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYN4_9STRA) HSP 1 Score: 142 bits (358), Expect = 3.700e-39 Identity = 86/196 (43.88%), Postives = 111/196 (56.63%), Query Frame = 1
Query: 22 GRGVLHLRCDWAVGIGGGLWTTGLLLTQHLSEHSDVYDNVFRGKRILELGSGTGLVGLAAARFGPPREVVITDLESHLDICRINVARNSIAGGATA-CSIRVEKYDWNAEVPTELGAVPFDVIIGTDVAYYEHLYAPFIKALGRTVGPESLVLLGVTRTDTGPAFFDAMDKAGFEYNLVHQAA------HKGFGLF 588
G + L C+W VGIGG LWT+G LL +LS + V + G R+LELGSGTGLVGLA A FGP VV+TDLE+H+ NV RN AG + ++ VE DWNA P +G F+ I+GTD+AY Y P + L ++ + LG+ R DT FF + AGFEY + +A K FGLF
Sbjct: 10 GDSSIELECNWDVGIGGSLWTSGRLLVDYLSRNGVVRQEI-EGTRVLELGSGTGLVGLAVALFGPA-SVVLTDLETHVAALENNVKRN--AGRIPSRTNVTVEALDWNA--PKNVGDGVFEWIVGTDIAYSRSFYVPLLNTLTLFGTKKTKIQLGLGRDDTEMQFFKMLQDAGFEYYKISEAFVASEFHGKDFGLF 199
BLAST of mRNA_H-elongata_contig1583.3783.1 vs. uniprot
Match: A0A024GDA2_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GDA2_9STRA) HSP 1 Score: 142 bits (359), Expect = 5.410e-39 Identity = 82/190 (43.16%), Postives = 105/190 (55.26%), Query Frame = 1
Query: 34 LHLRCDWAVGIGGGLWTTGLLLTQHLSEHSDVYDNVFRGKRILELGSGTGLVGLAAARFGPPREVVITDLESHLDICRINVARNS--IAGGATACSIRVEKYDWNAEVPTELGAV------------PF--DVIIGTDVAYYEHLYAPFIKALGRTVGPESLVLLGVTRTDTGPAFFDAMDKAGFEYNLV 555
L CDW+VGIGG +WT+G +LT + H + D +F+GKR++ELGSGTG+VGL A P +V++TDL S LD R NV RN I+G I V + W E + AV PF DVI+GTDVAY E Y P L R P +L+LL + R DT FFD ++ GF Y V
Sbjct: 23 LLFECDWSVGIGGSVWTSGEILTSYFKRHREHLDTLFQGKRVVELGSGTGIVGLTCAACFQPSQVILTDLSSQLDCLRNNVTRNQDKISG------ISVAELAWGDE--EHIDAVIAQMNVDSSTCKPFQVDVILGTDVAYLEEAYVPLSSTLNRLAQPHTLILLVINRIDTKLEFFDLLEGFGFSYYKV 204
BLAST of mRNA_H-elongata_contig1583.3783.1 vs. uniprot
Match: A0A067CH82_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CH82_SAPPC) HSP 1 Score: 142 bits (357), Expect = 6.380e-39 Identity = 83/192 (43.23%), Postives = 107/192 (55.73%), Query Frame = 1
Query: 31 VLHLRCDWAVGIGGGLWTTGLLLTQHLSEHSDVYDNVFRGKRILELGSGTGLVGLAAARFGPPREVVITDLESHLDICRINVARNSIAGGATACSIRVEKYDWNAEVPTELGAVPFDVIIGTDVAYYEHLYAPFIKALGRTVGPESLVLLGVTRTDTGPAFFDAMDKAGFEYNLV------HQAAHKGFGLF 588
V+ L C+W VGIGG LWT+G L+ + S + + +G +LELGSGTGLVGLA A GP VV+TDLESH+ + NV RNS A + + V DWN + A P D I+GTD+AY YAP +K L GP + +L+G+ R DT FF + AGF Y V + K FGLF
Sbjct: 21 VVELGCNWGVGIGGSLWTSGRLMVDYFSRNVRARQQL-QGASVLELGSGTGLVGLALACMGPA-SVVLTDLESHVAALQANVERNS-ARFSDGTLVSVAALDWNTASADDATA-PLDWIVGTDIAYMPEFYAPLLKTLQLLAGPNTRILVGLGRHDTDMRFFRLLQDAGFSYYKVSDELVSEEFRGKDFGLF 208 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1583.3783.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig1583.3783.1 >prot_H-elongata_contig1583.3783.1 ID=prot_H-elongata_contig1583.3783.1|Name=mRNA_H-elongata_contig1583.3783.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=202bp IEDVELNGRGVLHLRCDWAVGIGGGLWTTGLLLTQHLSEHSDVYDNVFRGback to top mRNA from alignment at H-elongata_contig1583:777..3309+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig1583.3783.1 ID=mRNA_H-elongata_contig1583.3783.1|Name=mRNA_H-elongata_contig1583.3783.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2533bp|location=Sequence derived from alignment at H-elongata_contig1583:777..3309+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig1583:777..3309+ >mRNA_H-elongata_contig1583.3783.1 ID=mRNA_H-elongata_contig1583.3783.1|Name=mRNA_H-elongata_contig1583.3783.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1212bp|location=Sequence derived from alignment at H-elongata_contig1583:777..3309+ (Himanthalia elongata Himel1 dioecious)back to top |