prot_H-elongata_contig157816.3756.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig157816.3756.1 vs. uniprot
Match: A0A6H5JTI6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI6_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 8.270e-15 Identity = 36/85 (42.35%), Postives = 57/85 (67.06%), Query Frame = 0
Query: 2 YTGCAFERDWENGTLEINQNTFAENMITQYGITAVFNIPASPGMDLGPRVEGETGGNDELGDYRALVGSLMRMSVMTRPDIANAL 86
+ GCA ERD E GTL+I+Q + ++M+ ++ + + IPASPG+DLGPR + E GG + R +GS+M +S +RPD++ A+
Sbjct: 1444 FDGCAIERDIEAGTLKISQTAYIDSMVERFDVKSTLRIPASPGVDLGPRRDDEKGGEWPV---REAIGSMMWVSTFSRPDVSFAV 1525
BLAST of mRNA_H-elongata_contig157816.3756.1 vs. uniprot
Match: A0A6H5JAZ6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAZ6_9PHAE) HSP 1 Score: 77.4 bits (189), Expect = 1.120e-14 Identity = 35/86 (40.70%), Postives = 58/86 (67.44%), Query Frame = 0
Query: 1 MYTGCAFERDWENGTLEINQNTFAENMITQYGITAVFNIPASPGMDLGPRVEGETGGNDELGDYRALVGSLMRMSVMTRPDIANAL 86
M+ GCA ERD E GTL++++ + ++M+ + + + F IPASPG+DLGP+ + E GG + R +GS+M +S +RPD++ A+
Sbjct: 944 MFDGCAIERDVEAGTLKLSKTAYIDSMVKCFDVQSTFRIPASPGVDLGPKRDDEKGGEWPV---REAIGSMMWVSTFSRPDVSFAV 1026
BLAST of mRNA_H-elongata_contig157816.3756.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 2.820e-14 Identity = 35/85 (41.18%), Postives = 56/85 (65.88%), Query Frame = 0
Query: 2 YTGCAFERDWENGTLEINQNTFAENMITQYGITAVFNIPASPGMDLGPRVEGETGGNDELGDYRALVGSLMRMSVMTRPDIANAL 86
+ GCA ERD E GTL I+Q + ++M+ ++ + + IPASPG+DLGP+ + E GG + R +GS+M +S +RPD++ A+
Sbjct: 522 FDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKGGEWPV---REAIGSIMWVSTFSRPDVSFAV 603
BLAST of mRNA_H-elongata_contig157816.3756.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 7.020e-14 Identity = 34/85 (40.00%), Postives = 58/85 (68.24%), Query Frame = 0
Query: 2 YTGCAFERDWENGTLEINQNTFAENMITQYGITAVFNIPASPGMDLGPRVEGETGGNDELGDYRALVGSLMRMSVMTRPDIANAL 86
+ GCA ERD E GTL I+Q + ++++ ++ + + +IPASPG+D+GP+ + E+GG + R +GS+M +S +RPDI+ A+
Sbjct: 231 FDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPV---REAIGSMMWVSTFSRPDISFAV 312
BLAST of mRNA_H-elongata_contig157816.3756.1 vs. uniprot
Match: A0A6H5JBN2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBN2_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 9.850e-14 Identity = 34/85 (40.00%), Postives = 56/85 (65.88%), Query Frame = 0
Query: 2 YTGCAFERDWENGTLEINQNTFAENMITQYGITAVFNIPASPGMDLGPRVEGETGGNDELGDYRALVGSLMRMSVMTRPDIANAL 86
+ GCA ERD E G L+I+Q + ++M+ ++ + + IPASPG+DLGP+ + E GG + R +GS+M +S +RPD++ A+
Sbjct: 698 FDGCAIERDVEAGNLKISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDNENGGEWPV---REAIGSMMWVSTFSRPDVSFAV 779
BLAST of mRNA_H-elongata_contig157816.3756.1 vs. uniprot
Match: A0A6H5KYH9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH9_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 3.430e-13 Identity = 34/85 (40.00%), Postives = 55/85 (64.71%), Query Frame = 0
Query: 2 YTGCAFERDWENGTLEINQNTFAENMITQYGITAVFNIPASPGMDLGPRVEGETGGNDELGDYRALVGSLMRMSVMTRPDIANAL 86
+ GCA ERD GTL I+Q + ++M+ ++ + + IPASPG+DLGP+ + E GG + R +GS+M +S +RPD++ A+
Sbjct: 681 FDGCAIERDVAAGTLTISQTAYVDSMVKRFDVQSASRIPASPGVDLGPKRDDEKGGEWPV---REAIGSMMWVSTFSRPDVSFAV 762
BLAST of mRNA_H-elongata_contig157816.3756.1 vs. uniprot
Match: A0A6H5KYI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYI5_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 3.450e-13 Identity = 35/85 (41.18%), Postives = 55/85 (64.71%), Query Frame = 0
Query: 2 YTGCAFERDWENGTLEINQNTFAENMITQYGITAVFNIPASPGMDLGPRVEGETGGNDELGDYRALVGSLMRMSVMTRPDIANAL 86
+ GCA ERD E GTL I+Q + ++M+ ++ + IPASPG+DLGP+ + E GG + R +GS+M +S +RPD++ A+
Sbjct: 925 FDGCAIERDVEAGTLRISQTAYIDSMLIRFDEQSTSRIPASPGVDLGPKRDDEKGGEWSV---REAIGSMMWVSTFSRPDVSFAV 1006
BLAST of mRNA_H-elongata_contig157816.3756.1 vs. uniprot
Match: A0A6H5JQU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQU4_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 6.380e-13 Identity = 34/85 (40.00%), Postives = 55/85 (64.71%), Query Frame = 0
Query: 2 YTGCAFERDWENGTLEINQNTFAENMITQYGITAVFNIPASPGMDLGPRVEGETGGNDELGDYRALVGSLMRMSVMTRPDIANAL 86
+ GCA ERD E GTL I+Q + ++M+ ++ + + IPASPG+DLGP+ + E G + R +GS+M +S +RPD++ A+
Sbjct: 642 FDGCAIERDVEAGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKRGEWPV---REAIGSMMWVSTFSRPDVSFAV 723
BLAST of mRNA_H-elongata_contig157816.3756.1 vs. uniprot
Match: A0A6H5JSK5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSK5_9PHAE) HSP 1 Score: 72.0 bits (175), Expect = 8.730e-13 Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = 0
Query: 4 GCAFERDWENGTLEINQNTFAENMITQYGITAVFNIPASPGMDLGPRVEGETGGNDELGDYRALVGSLMRMSVMTRPDIANAL 86
GCA ERD + GT I+Q ++M+ ++ + + F IPASPG+DLGP+ + E GG + R +GS+M +S +RPD++ A+
Sbjct: 566 GCAIERDVQAGTFHISQTANIDSMMKRFDVQSTFRIPASPGVDLGPKRDDEKGGEWPV---REAIGSMMWVSTFSRPDVSFAV 645
BLAST of mRNA_H-elongata_contig157816.3756.1 vs. uniprot
Match: A0A6H5K123_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K123_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 1.160e-12 Identity = 33/81 (40.74%), Postives = 53/81 (65.43%), Query Frame = 0
Query: 5 CAFERDWENGTLEINQNTFAENMITQYGITAVFNIPASPGMDLGPRVEGETGGNDELGDYRALVGSLMRMSVMTRPDIANA 85
CA +RD E GTL I++ + ++M+ ++ + + IPASPG+DLGPR + E GG + R +GS+M +S +RPD++ A
Sbjct: 51 CAIDRDVEAGTLNISETAYIDSMVKRFDVQSTSRIPASPGIDLGPRRDDEKGGEWPV---REAIGSMMWVSAFSRPDVSFA 128 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig157816.3756.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig157816.3756.1 ID=prot_H-elongata_contig157816.3756.1|Name=mRNA_H-elongata_contig157816.3756.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bpback to top |