prot_H-elongata_contig15769.3748.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15769.3748.1
Unique Nameprot_H-elongata_contig15769.3748.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length406
Homology
BLAST of mRNA_H-elongata_contig15769.3748.1 vs. uniprot
Match: D7G8K6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8K6_ECTSI)

HSP 1 Score: 573 bits (1476), Expect = 6.340e-199
Identity = 315/419 (75.18%), Postives = 341/419 (81.38%), Query Frame = 0
Query:    1 MSPNQSESVIAVLGGGSLHVFSIPRRCRLQEQAVAADLCMWRWLSPWGLALVTDTAVFYWSVSDSHAGGQSPDRNAGRSSSGGGSSGDRDSVD----SAHEKDAAGRFRRPRKAFARRRTLTKPGTLHRVYDYQASADGRWGMLLCAVVNDDWGGGVG---GGSGNGYGSHSSGIEGGGGPVKVDLHSFEMKTTFEFEVLGGALLTMPGSNPPLNLLGLVVRGEAGATELRVLDLDRSLARAEGPEALERLAMHGEGWLIATTHVIADGDLRGSSACRVVTSDG----AMGD----AESPPPTSLVSPPVFLRQWTENTNVLFLVGCHGLLLLLDVVTGAELARAWACLPPVVEAEVDPDVGDLVVVSTADEGGVHRLTVRAAVLQESVEYDHKDAEMAARVSALTGYGAGRSLLPRRR 404
            MSPNQSESVIAVLGGGSLHVFSIPRRCRLQEQAVA DLCMWRWLSPWGLALVTD AVFYWSV D   GG SP+R     S+GGG   DRD       +A+E+++  R RRPR+AFARRRTLT+P TLHRVYDYQ SADGRWG+LL   V+ +WGGG     G  GNGYGSHSSGIEGGGGPVKVDLHSFE  TTFEFEVLG +L+TMPGS+PPLNLLGLVVRGE GATELRVLDLDRSLA+AEG E LERLA  GEGWLIATTHVIADGDLRGS + RVV  DG     +G+     E+PP   LVSPPVFLRQWTENTNV+F+VGCHGLLL+LDVVTGAELARA AC  P++EAEVDPDVGDLVVVSTAD GGVHRL VRAA L+ESVEY HKD EMA RVSALTGY   R L P RR
Sbjct:  231 MSPNQSESVIAVLGGGSLHVFSIPRRCRLQEQAVATDLCMWRWLSPWGLALVTDGAVFYWSVLDGSMGGNSPERGG---STGGGGGLDRDLSGGGDAAANERESTARSRRPRQAFARRRTLTRPDTLHRVYDYQPSADGRWGLLLGPFVDSNWGGGXXXXXGALGNGYGSHSSGIEGGGGPVKVDLHSFERGTTFEFEVLGASLITMPGSSPPLNLLGLVVRGEGGATELRVLDLDRSLAQAEGAEDLERLAELGEGWLIATTHVIADGDLRGSCSYRVVGVDGRERGGLGEDAATGEAPP---LVSPPVFLRQWTENTNVVFVVGCHGLLLVLDVVTGAELARAQACRAPLIEAEVDPDVGDLVVVSTADGGGVHRLGVRAAALRESVEYYHKDPEMATRVSALTGYAGVRPLPPPRR 643          
BLAST of mRNA_H-elongata_contig15769.3748.1 vs. uniprot
Match: A0A6H5KWH5_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWH5_9PHAE)

HSP 1 Score: 569 bits (1467), Expect = 4.540e-188
Identity = 309/415 (74.46%), Postives = 337/415 (81.20%), Query Frame = 0
Query:    1 MSPNQSESVIAVLGGGSLHVFSIPRRCRLQEQAVAADLCMWRWLSPWGLALVTDTAVFYWSVSDSHAGGQSPDRNAGRSSSGGGSSGDRDSVDSAHEKDAAGRFRRPRKAFARRRTLTKPGTLHRVYDYQASADGRWGMLLCAVVNDDWGGGVG---GGSGNGYGSHSSGIEGGGGPVKVDLHSFEMKTTFEFEVLGGALLTMPGSNPPLNLLGLVVRGEAGATELRVLDLDRSLARAEGPEALERLAMHGEGWLIATTHVIADGDLRGSSACRVVTSDG----AMGDA----ESPPPTSLVSPPVFLRQWTENTNVLFLVGCHGLLLLLDVVTGAELARAWACLPPVVEAEVDPDVGDLVVVSTADEGGVHRLTVRAAVLQESVEYDHKDAEMAARVSALTGYGAGRSLLPRRR 404
            MSPNQSESVIAVLGGGSLHVFSIPRRCRLQEQAVA DLCMWRWLSPW LALVTD AVFYWSV D   GG SP+R+                  +A+E+++A R RRPR+AFARRRTLT+P TLHRVYDYQASADGRWG+LLCAVV+ DWGG      G  GNGYGSHSSGIEGGGGPVKVDLHSFE  TTFEFEVLG +L+TMPGS+PPLNLLGLVVRGE GATELRVLDLDRSLA+AEG E  ERL+  GEGWLIATTHVIADGDLRGS + RVV +DG     +G+     E+PP   LVSPPVFLRQW+ENTNV+FLVGCHGLLL+LDVVTGAELARA AC  P++EAEVDPDVGDLVVVSTAD GGVHR+ VRAA L+ESVEY HKD EMA RVSALTGY   R L P RR
Sbjct: 1028 MSPNQSESVIAVLGGGSLHVFSIPRRCRLQEQAVATDLCMWRWLSPWSLALVTDGAVFYWSVLDGSMGGNSPERDXXXXXXXXXXXXXGAGDAAANERESAARSRRPRQAFARRRTLTRPDTLHRVYDYQASADGRWGLLLCAVVDSDWGGXXXXXXGALGNGYGSHSSGIEGGGGPVKVDLHSFERGTTFEFEVLGASLMTMPGSSPPLNLLGLVVRGEGGATELRVLDLDRSLAQAEGAEDFERLSELGEGWLIATTHVIADGDLRGSCSYRVVGADGRERGGLGEGAATGEAPP---LVSPPVFLRQWSENTNVVFLVGCHGLLLVLDVVTGAELARAQACRAPLIEAEVDPDVGDLVVVSTADGGGVHRMGVRAAALRESVEYYHKDPEMATRVSALTGYAGVRPLPPPRR 1439          
BLAST of mRNA_H-elongata_contig15769.3748.1 vs. uniprot
Match: A0A835YLB9_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLB9_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 5.340e-12
Identity = 94/333 (28.23%), Postives = 137/333 (41.14%), Query Frame = 0
Query:   41 WRWLSPWGLALVTDTAVFYW-SVSDSHAGGQSPDRNAGRSSSGGGSSGDRDSVDSAHEKDAAGRFRRPRKAFARRRTLTKPGTLHRVYDYQASADGRWGMLLCAVVNDDWGGGVGGGSGNGYGSHSSGIEGGGGPVKVDLHSFEMKTTFEFEVLGGALLTMPGSNPPLNLLGLVVRGEAGATELR-----VLDLDRSLARAEGPEALERLAMHGEGWLIATTHVIADGD-----------------LRGSSACRVVTSDG-----AMGDAESPPPTSLVSPPVFLRQWTENTNVLFLVGCHGLLLLLDVVTGAELARAWACLPPVVEAEVDPD 345
            WRWL P  L L+ +  V+YW +++   A   +P R   R++    S+    +V S   + + G    P         L +   L RV  Y  SADG+W +L  + ++ D                      G G V +D+  F  + TF    LG ALL MPGS+PP+NLL LVV+ E G  ELR       +++ S +  +   +  R   H         H+ +  D                 +R   + R+    G     A   A+    +S   PP  L  W  N +VL +V   G+L L DV T A L        PV+EAEVD +
Sbjct:  976 WRWLGPGVLVLIAEQGVYYWPALAKGAAAAAAPQRGFSRTTEVRPSAA---AVTSRSHRLSHGSPLLP--------LLLQSLGLARVAGYDCSADGKWAVL--SALHAD----------------------GSGAVALDVRCFPARATFAMPALGAALLVMPGSSPPVNLLALVVQNEMGQPELRGEPKRCSNVNFSCSNFKYGASQSR--QHQSVTPRVQLHMRSSSDSDXXXXXXXXXXXXXXIMRILGSRRLYRRHGHDRRHAQLAAKWKHCSSTRCPPAALAHWPRNPHVLCVVARDGVLRLFDVHTCARLHCCRVASGPVLEAEVDAE 1271          
BLAST of mRNA_H-elongata_contig15769.3748.1 vs. uniprot
Match: A0A812CWS6_SEPPH (Clathrin heavy chain n=3 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812CWS6_SEPPH)

HSP 1 Score: 58.9 bits (141), Expect = 1.310e-5
Identity = 27/73 (36.99%), Postives = 45/73 (61.64%), Query Frame = 0
Query:    4 NQSESVIAVLGGGSLHVFSIPRRCRLQEQAVAADLCMWRWLSPWGLALVTDTAVFYWSVS--DSHAGGQSPDR 74
            N +  VIA+  G +L +F+I  + +++  A+  D+  W+W+S   +ALVTDTAV++WS+   D H G   P +
Sbjct:   74 NPASKVIALKAGKTLQIFNIEMKSKMKAHAMTEDVTFWKWISVNTVALVTDTAVYHWSMEGPDDHTGDSQPQK 146          
BLAST of mRNA_H-elongata_contig15769.3748.1 vs. uniprot
Match: A0A164VVK7_9AGAM (Clathrin heavy chain n=2 Tax=Sistotremastrum TaxID=139133 RepID=A0A164VVK7_9AGAM)

HSP 1 Score: 57.0 bits (136), Expect = 5.470e-5
Identity = 59/237 (24.89%), Postives = 97/237 (40.93%), Query Frame = 0
Query:    1 MSPNQSESVIAVLGGGSLHVFSIPRRCRLQEQAVAADLCMWRWLSPWGLALVTDTAVFYWSVSDSHAGGQSPDRNAGRSSSGGGSSGDRDSVDSAHEKDAAGRFRRPRKAFARRRTLTKPGTLHRVYDYQASADGRWGMLLCAVVNDDWGGGVGGGSGNGYGSHSSGIEGGGGPVKVDLHSFE--MKTTFEFEVLGGALLTMPGSNPPLNLLGLVVRGEAGATELRVLDLDRSLARA 235
            M P Q   ++A+  G  L VF+I  + +++      D+  W+W+S   + LVTDTAVF+WS+ D+     SP                                  P K F R   L      H++ +Y+ +AD +W +L+          G+ G +GN     +  I G      + L+S E  +    E      A L + G+  P +L    VR   GA +L ++++D +   A
Sbjct:   72 MHPKQK--ILALKAGRQLQVFNIETKQKVKSHMTTEDVVFWKWISDSTIGLVTDTAVFHWSIDDA----SSP----------------------------------PAKIFDRHANLAG----HQIINYRVTADEKWVVLI----------GISGNTGN---PSAFKIRG-----SMQLYSRERGVSQPIEGHAAAFAELRLDGNAKPTSLFTFAVRTATGA-KLHIVEIDHAAPNA 245          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15769.3748.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G8K6_ECTSI6.340e-19975.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KWH5_9PHAE4.540e-18874.46Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835YLB9_9STRA5.340e-1228.23Protein kinase domain-containing protein n=1 Tax=T... [more]
A0A812CWS6_SEPPH1.310e-536.99Clathrin heavy chain n=3 Tax=Sepia pharaonis TaxID... [more]
A0A164VVK7_9AGAM5.470e-524.89Clathrin heavy chain n=2 Tax=Sistotremastrum TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016025Clathrin heavy chain, N-terminalSUPERFAMILY50989Clathrin heavy-chain terminal domaincoord: 4..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15769contigH-elongata_contig15769:5620..7226 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15769.3748.1mRNA_H-elongata_contig15769.3748.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15769 3785..7226 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15769.3748.1 ID=prot_H-elongata_contig15769.3748.1|Name=mRNA_H-elongata_contig15769.3748.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=406bp
MSPNQSESVIAVLGGGSLHVFSIPRRCRLQEQAVAADLCMWRWLSPWGLA
LVTDTAVFYWSVSDSHAGGQSPDRNAGRSSSGGGSSGDRDSVDSAHEKDA
AGRFRRPRKAFARRRTLTKPGTLHRVYDYQASADGRWGMLLCAVVNDDWG
GGVGGGSGNGYGSHSSGIEGGGGPVKVDLHSFEMKTTFEFEVLGGALLTM
PGSNPPLNLLGLVVRGEAGATELRVLDLDRSLARAEGPEALERLAMHGEG
WLIATTHVIADGDLRGSSACRVVTSDGAMGDAESPPPTSLVSPPVFLRQW
TENTNVLFLVGCHGLLLLLDVVTGAELARAWACLPPVVEAEVDPDVGDLV
VVSTADEGGVHRLTVRAAVLQESVEYDHKDAEMAARVSALTGYGAGRSLL
PRRRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016025Clathrin_H-chain_N