prot_H-elongata_contig157191.3723.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig157191.3723.1
Unique Nameprot_H-elongata_contig157191.3723.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length174
Homology
BLAST of mRNA_H-elongata_contig157191.3723.1 vs. uniprot
Match: A0A8F0JZU4_9PHAE (Sec-independent protein translocase component TatC n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZU4_9PHAE)

HSP 1 Score: 303 bits (776), Expect = 3.120e-102
Identity = 163/172 (94.77%), Postives = 170/172 (98.84%), Query Frame = 0
Query:    1 VISVYNGVLFSTPLLLGQALFFFRPALSKNEKKLTLWLLISSIFLFFLGLFFSYFILIPAALNFFIFYGSEVIEPFWSFSQYFNFVSALFFSTGLVFQVPIVQIILSLAKIIDPVKMLNYWRPMILLSTVLGAVLTPSADPITQLLLSGALFFLYFLGSLISINLTKKDVTI 172
            VIS+YNGVLFSTPLLLGQALFFFRPALS++EKKL LWLLISSIFLFF GLFFSYFILIPAALNFFIFYGSEVIEPFWSFSQYFNFVSALFFSTGLVFQVPIVQIILSLAK+IDP+KMLNYWRPMILLSTVLGA+LTPSADPITQLLLSGALFFLYFLGSLISINLTKK+VTI
Sbjct:   89 VISLYNGVLFSTPLLLGQALFFFRPALSRDEKKLILWLLISSIFLFFSGLFFSYFILIPAALNFFIFYGSEVIEPFWSFSQYFNFVSALFFSTGLVFQVPIVQIILSLAKLIDPIKMLNYWRPMILLSTVLGAILTPSADPITQLLLSGALFFLYFLGSLISINLTKKEVTI 260          
BLAST of mRNA_H-elongata_contig157191.3723.1 vs. uniprot
Match: A0A0R6LUQ7_UNDPI (Sec-independent protein translocase component n=24 Tax=Laminariales TaxID=2886 RepID=A0A0R6LUQ7_UNDPI)

HSP 1 Score: 265 bits (678), Expect = 2.410e-87
Identity = 143/170 (84.12%), Postives = 154/170 (90.59%), Query Frame = 0
Query:    1 VISVYNGVLFSTPLLLGQALFFFRPALSKNEKKLTLWLLISSIFLFFLGLFFSYFILIPAALNFFIFYGSEVIEPFWSFSQYFNFVSALFFSTGLVFQVPIVQIILSLAKIIDPVKMLNYWRPMILLSTVLGAVLTPSADPITQLLLSGALFFLYFLGSLISINLTKKDV 170
            +IS Y GVLFSTPLLL Q LFFFRPAL+KNEK + + LLISSI LF LGL FSYF+LIPAALNFFIFYGSEVIEPFWSF+QYFNFVS LFFSTGLVFQVPIVQIILSL+KIIDP+KMLNYWRPMIL ST+LGAVLTPSADPITQLLLS ALF LYFLGS+ SINL KK+V
Sbjct:   90 IISFYAGVLFSTPLLLSQTLFFFRPALTKNEKNIIVGLLISSIVLFILGLLFSYFLLIPAALNFFIFYGSEVIEPFWSFTQYFNFVSTLFFSTGLVFQVPIVQIILSLSKIIDPIKMLNYWRPMILFSTILGAVLTPSADPITQLLLSSALFLLYFLGSITSINLVKKEV 259          
BLAST of mRNA_H-elongata_contig157191.3723.1 vs. uniprot
Match: A0A7U1AQM0_9PHAE (Sec-independent protein translocase component TatC n=4 Tax=Laminariales TaxID=2886 RepID=A0A7U1AQM0_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 6.890e-87
Identity = 140/170 (82.35%), Postives = 155/170 (91.18%), Query Frame = 0
Query:    1 VISVYNGVLFSTPLLLGQALFFFRPALSKNEKKLTLWLLISSIFLFFLGLFFSYFILIPAALNFFIFYGSEVIEPFWSFSQYFNFVSALFFSTGLVFQVPIVQIILSLAKIIDPVKMLNYWRPMILLSTVLGAVLTPSADPITQLLLSGALFFLYFLGSLISINLTKKDV 170
            +IS Y GVLFSTPLLL Q LFFFRPAL+KNEK + + LL+SSI LF LGL FSYF+LIPAALNFFIFYG+EVIEPFWSF+QYFNFVS LFFSTGLVFQVPIVQIILSL+KI+DP+KMLNYWRPMIL ST+LGAVLTPSADPITQLLLSGALF LYFLGS+ SINL K++V
Sbjct:   90 IISFYAGVLFSTPLLLSQTLFFFRPALTKNEKNIIVGLLVSSIVLFVLGLLFSYFLLIPAALNFFIFYGAEVIEPFWSFTQYFNFVSTLFFSTGLVFQVPIVQIILSLSKIVDPIKMLNYWRPMILFSTILGAVLTPSADPITQLLLSGALFLLYFLGSITSINLVKREV 259          
BLAST of mRNA_H-elongata_contig157191.3723.1 vs. uniprot
Match: A0A8F0F9L1_9PHAE (Sec-independent protein translocase component TatC n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9L1_9PHAE)

HSP 1 Score: 263 bits (671), Expect = 2.980e-86
Identity = 138/169 (81.66%), Postives = 155/169 (91.72%), Query Frame = 0
Query:    1 VISVYNGVLFSTPLLLGQALFFFRPALSKNEKKLTLWLLISSIFLFFLGLFFSYFILIPAALNFFIFYGSEVIEPFWSFSQYFNFVSALFFSTGLVFQVPIVQIILSLAKIIDPVKMLNYWRPMILLSTVLGAVLTPSADPITQLLLSGALFFLYFLGSLISINLTKKD 169
            VIS Y GV+FSTPLLL Q LFFFRPAL+KNEK + + LLISSIFLF LGL FSYF+LIPAALNFFIFYGSEV+EPFWSF+QYFNFVS LFFSTGLVFQVPIVQ+ILSL+++IDP KML+YWRPMIL ST+LGA+LTPSADPITQLLL+GALFFLYFLGS+ SINL KK+
Sbjct:   90 VISFYAGVIFSTPLLLSQTLFFFRPALTKNEKNIVVLLLISSIFLFILGLIFSYFLLIPAALNFFIFYGSEVVEPFWSFTQYFNFVSTLFFSTGLVFQVPIVQVILSLSRLIDPKKMLDYWRPMILFSTILGAILTPSADPITQLLLAGALFFLYFLGSITSINLIKKE 258          
BLAST of mRNA_H-elongata_contig157191.3723.1 vs. uniprot
Match: A0A2R4QPY8_9PHAE (Sec-independent protein translocase component TatC n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPY8_9PHAE)

HSP 1 Score: 261 bits (667), Expect = 1.210e-85
Identity = 137/170 (80.59%), Postives = 153/170 (90.00%), Query Frame = 0
Query:    1 VISVYNGVLFSTPLLLGQALFFFRPALSKNEKKLTLWLLISSIFLFFLGLFFSYFILIPAALNFFIFYGSEVIEPFWSFSQYFNFVSALFFSTGLVFQVPIVQIILSLAKIIDPVKMLNYWRPMILLSTVLGAVLTPSADPITQLLLSGALFFLYFLGSLISINLTKKDV 170
            +IS   GVLFSTPLLL Q LFFFRPAL+KNE+ + +W+LISS+FLFFLGL FSYF+LIPAALNFF+FYGSEVIEP WSF+QYFNFVSALFFSTGLVFQVPIVQ+ILSL+KIIDP+KM NYWRPMIL ST+LGAVLTPSADPITQLLLS ALF LY LGS+ SINL KK +
Sbjct:   90 IISFSIGVLFSTPLLLSQLLFFFRPALNKNEQNIIVWILISSVFLFFLGLLFSYFLLIPAALNFFVFYGSEVIEPLWSFNQYFNFVSALFFSTGLVFQVPIVQVILSLSKIIDPIKMFNYWRPMILFSTILGAVLTPSADPITQLLLSSALFLLYILGSITSINLIKKPI 259          
BLAST of mRNA_H-elongata_contig157191.3723.1 vs. uniprot
Match: A0A141BSG3_9PHAE (TatC n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSG3_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 3.420e-84
Identity = 136/169 (80.47%), Postives = 150/169 (88.76%), Query Frame = 0
Query:    1 VISVYNGVLFSTPLLLGQALFFFRPALSKNEKKLTLWLLISSIFLFFLGLFFSYFILIPAALNFFIFYGSEVIEPFWSFSQYFNFVSALFFSTGLVFQVPIVQIILSLAKIIDPVKMLNYWRPMILLSTVLGAVLTPSADPITQLLLSGALFFLYFLGSLISINLTKKD 169
            +IS   G+LFSTPLLL Q L FFRPAL+KNE+K   WLL+SS+FLFFLGL FSYF+LIPAA+NFFIFYGSEVIEP WSF+QYF FVSALFFSTGLVFQVPIVQIILSL KI+DP+KM NYWRPMIL ST+LGA+LTPSADPITQLLLS ALF LYF+GSLISINL KK 
Sbjct:   90 IISFSLGILFSTPLLLSQLLLFFRPALNKNERKSIFWLLLSSLFLFFLGLLFSYFLLIPAAINFFIFYGSEVIEPLWSFNQYFTFVSALFFSTGLVFQVPIVQIILSLFKIVDPIKMFNYWRPMILFSTILGAILTPSADPITQLLLSSALFLLYFIGSLISINLIKKQ 258          
BLAST of mRNA_H-elongata_contig157191.3723.1 vs. uniprot
Match: A0A5A4MKB0_9PHAE (Sec-independent periplasmic protein translocase n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A5A4MKB0_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 6.220e-77
Identity = 123/170 (72.35%), Postives = 148/170 (87.06%), Query Frame = 0
Query:    1 VISVYNGVLFSTPLLLGQALFFFRPALSKNEKKLTLWLLISSIFLFFLGLFFSYFILIPAALNFFIFYGSEVIEPFWSFSQYFNFVSALFFSTGLVFQVPIVQIILSLAKIIDPVKMLNYWRPMILLSTVLGAVLTPSADPITQLLLSGALFFLYFLGSLISINLTKKDV 170
            V+S+Y G+LFSTPL++ Q +FFFRPAL+KNEK + L+ L   IFLFFLGLFFSYF+L+PAALNFF+ YGS+V+EP WSF+QYF+FVS LF S GLVFQVPI+Q++LS+++IIDPVKML YWRPMIL  T+LGA+LTPSADPITQLLLS ALFFLYFLGSL SINL  K +
Sbjct:   97 VMSIYTGLLFSTPLVIIQTIFFFRPALTKNEKNIILFTLTGCIFLFFLGLFFSYFLLVPAALNFFLLYGSDVVEPLWSFTQYFSFVSTLFVSAGLVFQVPIIQVMLSVSRIIDPVKMLGYWRPMILFCTMLGAILTPSADPITQLLLSSALFFLYFLGSLTSINLINKKL 266          
BLAST of mRNA_H-elongata_contig157191.3723.1 vs. uniprot
Match: A0A8E6D5S5_9PHAE (Sec-independent protein translocase-like protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D5S5_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 1.560e-74
Identity = 124/168 (73.81%), Postives = 141/168 (83.93%), Query Frame = 0
Query:    1 VISVYNGVLFSTPLLLGQALFFFRPALSKNEKKLTLWLLISSIFLFFLGLFFSYFILIPAALNFFIFYGSEVIEPFWSFSQYFNFVSALFFSTGLVFQVPIVQIILSLAKIIDPVKMLNYWRPMILLSTVLGAVLTPSADPITQLLLSGALFFLYFLGSLISINLTKK 168
            +IS Y G+LFSTP +L Q L FF+PALSKNEKK  +WL  SSI LFFLGL FSYF+LIPAALNFFI Y  EVIEPFWSF+QYF FVSALFFSTGLVFQVPI+QI+LSL  II+P KMLNYWR ++   TV+GAV+TPSADPITQLLLSGALF LY+LG +IS+ L KK
Sbjct:   94 IISFYTGLLFSTPFVLSQILLFFQPALSKNEKKTVIWLFFSSIILFFLGLVFSYFLLIPAALNFFINYSEEVIEPFWSFNQYFGFVSALFFSTGLVFQVPIIQIVLSLTNIIEPSKMLNYWRLILFFCTVIGAVITPSADPITQLLLSGALFLLYYLGCIISMVLKKK 261          
BLAST of mRNA_H-elongata_contig157191.3723.1 vs. uniprot
Match: A0A6B7EV76_9PHAE (Sec-independent periplasmic protein translocase n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EV76_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 1.770e-74
Identity = 120/170 (70.59%), Postives = 149/170 (87.65%), Query Frame = 0
Query:    1 VISVYNGVLFSTPLLLGQALFFFRPALSKNEKKLTLWLLISSIFLFFLGLFFSYFILIPAALNFFIFYGSEVIEPFWSFSQYFNFVSALFFSTGLVFQVPIVQIILSLAKIIDPVKMLNYWRPMILLSTVLGAVLTPSADPITQLLLSGALFFLYFLGSLISINLTKKDV 170
            V+S+Y G+LFSTPL++ Q +FFFRPAL+KNEK + L++L   IFLFFLGLFFSYF+L+PAALNFF+ YGS+V+EP WSF+QYF+FVS LF STG+VFQVPIVQI+LS+++IIDP +ML+ WR MIL  T+LGA+LTPSADPITQLLLSGALF LYFLGS+ SI+L KK +
Sbjct:   99 VMSIYTGILFSTPLVIIQTIFFFRPALTKNEKNIILFILTGCIFLFFLGLFFSYFLLVPAALNFFLLYGSDVVEPLWSFTQYFSFVSTLFVSTGIVFQVPIVQIMLSVSRIIDPKEMLSCWRAMILFCTILGAILTPSADPITQLLLSGALFLLYFLGSITSISLIKKPL 268          
BLAST of mRNA_H-elongata_contig157191.3723.1 vs. uniprot
Match: D1J7B2_ECTSI (Sec-independent periplasmic protein translocase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J7B2_ECTSI)

HSP 1 Score: 232 bits (592), Expect = 3.350e-74
Identity = 119/170 (70.00%), Postives = 149/170 (87.65%), Query Frame = 0
Query:    1 VISVYNGVLFSTPLLLGQALFFFRPALSKNEKKLTLWLLISSIFLFFLGLFFSYFILIPAALNFFIFYGSEVIEPFWSFSQYFNFVSALFFSTGLVFQVPIVQIILSLAKIIDPVKMLNYWRPMILLSTVLGAVLTPSADPITQLLLSGALFFLYFLGSLISINLTKKDV 170
            V+S+Y GVLF+TPL++ Q +FFFRPAL+KNEK + L++L   I LFFLGLFFSYF+L+PAALNFF+ YGS+V+EP WSF+QYF+FVS LF S GLVFQVPI+QI+LS+++IIDPV+ML+ WRPMILL T+LGA+LTPSADPITQLLLS ALF LYFLGS+ SIN+  K++
Sbjct:   97 VMSLYTGVLFATPLIIIQTIFFFRPALTKNEKNIILFILTGCIVLFFLGLFFSYFLLVPAALNFFLIYGSDVVEPLWSFTQYFSFVSTLFVSAGLVFQVPIIQIMLSVSRIIDPVEMLSCWRPMILLCTILGAILTPSADPITQLLLSSALFLLYFLGSITSINIINKNL 266          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig157191.3723.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0JZU4_9PHAE3.120e-10294.77Sec-independent protein translocase component TatC... [more]
A0A0R6LUQ7_UNDPI2.410e-8784.12Sec-independent protein translocase component n=24... [more]
A0A7U1AQM0_9PHAE6.890e-8782.35Sec-independent protein translocase component TatC... [more]
A0A8F0F9L1_9PHAE2.980e-8681.66Sec-independent protein translocase component TatC... [more]
A0A2R4QPY8_9PHAE1.210e-8580.59Sec-independent protein translocase component TatC... [more]
A0A141BSG3_9PHAE3.420e-8480.47TatC n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A141... [more]
A0A5A4MKB0_9PHAE6.220e-7772.35Sec-independent periplasmic protein translocase n=... [more]
A0A8E6D5S5_9PHAE1.560e-7473.81Sec-independent protein translocase-like protein n... [more]
A0A6B7EV76_9PHAE1.770e-7470.59Sec-independent periplasmic protein translocase n=... [more]
D1J7B2_ECTSI3.350e-7470.00Sec-independent periplasmic protein translocase n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002033Sec-independent periplasmic protein translocase TatCPRINTSPR01840TATCFAMILYcoord: 82..110
score: 37.09
coord: 13..31
score: 37.44
coord: 31..57
score: 40.53
IPR002033Sec-independent periplasmic protein translocase TatCPFAMPF00902TatCcoord: 2..147
e-value: 3.9E-36
score: 124.8
IPR002033Sec-independent periplasmic protein translocase TatCTIGRFAMTIGR00945TIGR00945coord: 2..155
e-value: 3.4E-43
score: 146.0
IPR002033Sec-independent periplasmic protein translocase TatCPANTHERPTHR30371SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATCcoord: 2..163
NoneNo IPR availablePANTHERPTHR30371:SF5coord: 2..163
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 166..173
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 145..165
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 63..81
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 120..139
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 109..119
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 24..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..108
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 140..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..62
NoneNo IPR availableTMHMMTMhelixcoord: 142..164
NoneNo IPR availableTMHMMTMhelixcoord: 118..137
NoneNo IPR availableTMHMMTMhelixcoord: 84..106
NoneNo IPR availableTMHMMTMhelixcoord: 36..58
NoneNo IPR availableTMHMMTMhelixcoord: 4..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig157191contigH-elongata_contig157191:981..1502 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig157191.3723.1mRNA_H-elongata_contig157191.3723.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig157191 981..1502 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig157191.3723.1 ID=prot_H-elongata_contig157191.3723.1|Name=mRNA_H-elongata_contig157191.3723.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=174bp
VISVYNGVLFSTPLLLGQALFFFRPALSKNEKKLTLWLLISSIFLFFLGL
FFSYFILIPAALNFFIFYGSEVIEPFWSFSQYFNFVSALFFSTGLVFQVP
IVQIILSLAKIIDPVKMLNYWRPMILLSTVLGAVLTPSADPITQLLLSGA
LFFLYFLGSLISINLTKKDVTIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002033TatC