prot_H-elongata_contig157042.3718.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig157042.3718.1
Unique Nameprot_H-elongata_contig157042.3718.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length71
Homology
BLAST of mRNA_H-elongata_contig157042.3718.1 vs. uniprot
Match: D8LCK6_ECTSI (Protein transport protein SEC23 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCK6_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 2.080e-27
Identity = 51/63 (80.95%), Postives = 58/63 (92.06%), Query Frame = 0
Query:    8 QFVTQYQQAGGKFRLRVTTLCGGWHSDPTNFAPMVKGFDQEAAAVLMARIAVHRTETEEVRDI 70
            QFVTQYQQAGG+FRLR TT+CGGWHSDP +  P+V+G+DQ+AAAVLMARIAVHRTETEEV DI
Sbjct:  503 QFVTQYQQAGGRFRLRATTVCGGWHSDPNDLGPLVRGYDQQAAAVLMARIAVHRTETEEVADI 565          
BLAST of mRNA_H-elongata_contig157042.3718.1 vs. uniprot
Match: A0A7S2V3Z1_9STRA (Protein transport protein SEC23 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3Z1_9STRA)

HSP 1 Score: 103 bits (256), Expect = 8.260e-25
Identity = 45/64 (70.31%), Postives = 57/64 (89.06%), Query Frame = 0
Query:    8 QFVTQYQQAGGKFRLRVTTLCGGWHSDPTNFAPMVKGFDQEAAAVLMARIAVHRTETEEVRDII 71
            QFVTQYQ   G++RLR TT+CGGWHSDP++ AP+ +GFDQEA+AV+MAR+AVHRTE+EEV DI+
Sbjct:  265 QFVTQYQHPSGRYRLRATTVCGGWHSDPSDSAPLARGFDQEASAVIMARLAVHRTESEEVPDIL 328          
BLAST of mRNA_H-elongata_contig157042.3718.1 vs. uniprot
Match: F0XWM5_AURAN (Protein transport protein SEC23 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWM5_AURAN)

HSP 1 Score: 99.0 bits (245), Expect = 1.530e-22
Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 0
Query:    6 WRQFVTQYQQAGGKFRLRVTTLCGGWHSDPTNFAPMVKGFDQEAAAVLMARIAVHRTETEEVRDII 71
            + QF+TQYQ A G++RLR TTLCG W  DP + AP+ + FDQEAAAVLMAR+AVHRTETEEV DI+
Sbjct:  491 YAQFITQYQHANGRYRLRSTTLCGAWQPDPNDSAPVARSFDQEAAAVLMARVAVHRTETEEVPDIL 556          
BLAST of mRNA_H-elongata_contig157042.3718.1 vs. uniprot
Match: A0A7S2W7G0_9STRA (Protein transport protein SEC23 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W7G0_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 2.520e-21
Identity = 45/64 (70.31%), Postives = 52/64 (81.25%), Query Frame = 0
Query:    8 QFVTQYQQAGGKFRLRVTTLCGGWHSDPTNFAPMVKGFDQEAAAVLMARIAVHRTETEEVRDII 71
            QF+T YQ A GK RLR TTLCGGWHSDP + +P+ + FDQEAAAVLMAR+AV RT TEEV DI+
Sbjct:  489 QFITTYQHANGKTRLRSTTLCGGWHSDPADSSPIGRSFDQEAAAVLMARVAVFRTSTEEVADIL 552          
BLAST of mRNA_H-elongata_contig157042.3718.1 vs. uniprot
Match: A0A8J2WHU7_9STRA (Protein transport protein SEC23 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WHU7_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 3.440e-21
Identity = 44/66 (66.67%), Postives = 53/66 (80.30%), Query Frame = 0
Query:    6 WRQFVTQYQQAGGKFRLRVTTLCGGWHSDPTNFAPMVKGFDQEAAAVLMARIAVHRTETEEVRDII 71
            + QF+T YQ A GK RLR TTLCG W  DP++ +P+ + FDQEAAAVLMAR+AVHRTETEEV DI+
Sbjct:  485 YAQFLTSYQHASGKQRLRCTTLCGAWQPDPSDASPVARSFDQEAAAVLMARVAVHRTETEEVADIL 550          
BLAST of mRNA_H-elongata_contig157042.3718.1 vs. uniprot
Match: A0A7S3HLG5_9STRA (Protein transport protein SEC23 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLG5_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 5.280e-20
Identity = 40/63 (63.49%), Postives = 50/63 (79.37%), Query Frame = 0
Query:    8 QFVTQYQQAGGKFRLRVTTLCGGWHSDPTNFAPMVKGFDQEAAAVLMARIAVHRTETEEVRDI 70
            QF+T YQ + G+F LRVTT+CGGWHSDP + AP+   FDQEAA VLMAR+AVHR  TE++ D+
Sbjct:  250 QFLTTYQASNGRFHLRVTTVCGGWHSDPADHAPIAASFDQEAATVLMARLAVHRCLTEDIADV 312          
BLAST of mRNA_H-elongata_contig157042.3718.1 vs. uniprot
Match: A0A7S1G6C9_9STRA (Protein transport protein SEC23 n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6C9_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.430e-19
Identity = 41/64 (64.06%), Postives = 51/64 (79.69%), Query Frame = 0
Query:    8 QFVTQYQQAGGKFRLRVTTLCGGWHSDPTNFAPMVKGFDQEAAAVLMARIAVHRTETEEVRDII 71
            QF+T+YQ + G+ RLRVTT+ G WH+D +  AP+   FDQEAAAVLMARIAVHRTETE+  DI+
Sbjct:  220 QFITRYQHSSGRHRLRVTTVAGPWHTDASTLAPVASSFDQEAAAVLMARIAVHRTETEDTLDIL 283          
BLAST of mRNA_H-elongata_contig157042.3718.1 vs. uniprot
Match: A0A7S1BQW7_9STRA (Protein transport protein SEC23 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BQW7_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 5.020e-19
Identity = 41/64 (64.06%), Postives = 51/64 (79.69%), Query Frame = 0
Query:    8 QFVTQYQQAGGKFRLRVTTLCGGWHSDPTNFAPMVKGFDQEAAAVLMARIAVHRTETEEVRDII 71
            QF+T+YQ A G+ RLR TTLCG WHSDP +  P+   FDQEAAAVL AR+AV+RTETE+V D++
Sbjct:  507 QFITKYQHANGRTRLRSTTLCGPWHSDPNDHNPIKTSFDQEAAAVLTARLAVYRTETEDVGDVL 570          
BLAST of mRNA_H-elongata_contig157042.3718.1 vs. uniprot
Match: A0A6U3YQE8_9STRA (Protein transport protein SEC23 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3YQE8_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 9.360e-19
Identity = 40/64 (62.50%), Postives = 49/64 (76.56%), Query Frame = 0
Query:    8 QFVTQYQQAGGKFRLRVTTLCGGWHSDPTNFAPMVKGFDQEAAAVLMARIAVHRTETEEVRDII 71
            Q +T YQ A G+ RLR TTLCG WH+D  + +P+ + FDQE AAVLMARIA HRT+TEEV DI+
Sbjct:  502 QLITTYQHASGRQRLRATTLCGPWHNDTKDMSPLARSFDQETAAVLMARIATHRTDTEEVPDIL 565          
BLAST of mRNA_H-elongata_contig157042.3718.1 vs. uniprot
Match: A0A7S2JSI2_9STRA (Protein transport protein SEC23 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JSI2_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.350e-18
Identity = 39/64 (60.94%), Postives = 50/64 (78.12%), Query Frame = 0
Query:    8 QFVTQYQQAGGKFRLRVTTLCGGWHSDPTNFAPMVKGFDQEAAAVLMARIAVHRTETEEVRDII 71
            QF+T+YQ   G+ R+R TTLCG WHSDP +  P+   FDQEAAA+L AR+AVHRTETE+V D++
Sbjct:  154 QFLTRYQHMNGRTRVRSTTLCGPWHSDPNDVTPIRASFDQEAAAILTARLAVHRTETEDVGDVL 217          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig157042.3718.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCK6_ECTSI2.080e-2780.95Protein transport protein SEC23 n=2 Tax=Ectocarpus... [more]
A0A7S2V3Z1_9STRA8.260e-2570.31Protein transport protein SEC23 (Fragment) n=1 Tax... [more]
F0XWM5_AURAN1.530e-2268.18Protein transport protein SEC23 n=1 Tax=Aureococcu... [more]
A0A7S2W7G0_9STRA2.520e-2170.31Protein transport protein SEC23 n=1 Tax=Rhizochrom... [more]
A0A8J2WHU7_9STRA3.440e-2166.67Protein transport protein SEC23 n=1 Tax=Pelagomona... [more]
A0A7S3HLG5_9STRA5.280e-2063.49Protein transport protein SEC23 n=1 Tax=Spumella e... [more]
A0A7S1G6C9_9STRA2.430e-1964.06Protein transport protein SEC23 n=1 Tax=Bicosoecid... [more]
A0A7S1BQW7_9STRA5.020e-1964.06Protein transport protein SEC23 n=1 Tax=Corethron ... [more]
A0A6U3YQE8_9STRA9.360e-1962.50Protein transport protein SEC23 n=1 Tax=Dictyocha ... [more]
A0A7S2JSI2_9STRA1.350e-1860.94Protein transport protein SEC23 n=1 Tax=Leptocylin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.120.730coord: 34..71
e-value: 3.9E-7
score: 31.6
NoneNo IPR availableSUPERFAMILY81995beta-sandwich domain of Sec23/24coord: 6..45
IPR037364Protein transport protein Sec23PANTHERPTHR11141PROTEIN TRANSPORT PROTEIN SEC23coord: 8..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig157042contigH-elongata_contig157042:284..496 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig157042.3718.1mRNA_H-elongata_contig157042.3718.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig157042 284..496 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig157042.3718.1 ID=prot_H-elongata_contig157042.3718.1|Name=mRNA_H-elongata_contig157042.3718.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp
ELAFPWRQFVTQYQQAGGKFRLRVTTLCGGWHSDPTNFAPMVKGFDQEAA
AVLMARIAVHRTETEEVRDII
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037364Sec23