prot_H-elongata_contig15700.3712.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15700.3712.1
Unique Nameprot_H-elongata_contig15700.3712.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length91
Homology
[Close]
BLAST of mRNA_H-elongata_contig15700.3712.1 vs. uniprot
Match: A0A6H5L6Q9_9PHAE (Protein xylosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6Q9_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 5.250e-18
Identity = 41/61 (67.21%), Postives = 50/61 (81.97%), Query Frame = 0 
Query:   31 SSSPQQARVGYLIMASGLDELDKTKRLLEAIYDANNTYLVHLDRKNDASIRADFEDFISAW 91
            S+  ++AR+GYLIM+SG +EL KTKRLL+AIYD NN YLVHLDRK+  SIR DFE+FI  W
Sbjct:  168 STQEKRARIGYLIMSSGTEELHKTKRLLKAIYDPNNFYLVHLDRKDKHSIRRDFENFIEEW 228
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15700.3712.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L6Q9_9PHAE5.250e-1867.21Protein xylosyltransferase n=2 Tax=Ectocarpus TaxI... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15700contigH-elongata_contig15700:6518..6961 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15700.3712.1mRNA_H-elongata_contig15700.3712.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15700 6511..6961 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15700.3712.1 ID=prot_H-elongata_contig15700.3712.1|Name=mRNA_H-elongata_contig15700.3712.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp
MSDEGMLTSRKPWTVTSNRILKGKTEVLTSSSSPQQARVGYLIMASGLDE
LDKTKRLLEAIYDANNTYLVHLDRKNDASIRADFEDFISAW
back to top