prot_H-elongata_contig15682.3705.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15682.3705.1
Unique Nameprot_H-elongata_contig15682.3705.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length98
Homology
BLAST of mRNA_H-elongata_contig15682.3705.1 vs. uniprot
Match: A0A6H5JYE2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYE2_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 4.610e-22
Identity = 44/89 (49.44%), Postives = 61/89 (68.54%), Query Frame = 0
Query:    1 LRIIGTQRKRPDHRMTSYNRALEVTRCESIETTLRTRRLMWAGMLIRMSGGRLPKRIAFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFG 89
            LR+IG +RK+  +R  SY + L+   C+S+E T+R RRL++AG L R   GRLPKR+ FG L G  +R RGG+E+ W  CV  D++AFG
Sbjct:   30 LRVIGYKRKKDTYRQLSYAQTLKRVECQSVEATIRQRRLLFAGSLARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLKAFG 118          
BLAST of mRNA_H-elongata_contig15682.3705.1 vs. uniprot
Match: A0A6H5JAH7_9PHAE (Reverse transcriptase domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAH7_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 1.070e-21
Identity = 45/89 (50.56%), Postives = 60/89 (67.42%), Query Frame = 0
Query:    1 LRIIGTQRKRPDHRMTSYNRALEVTRCESIETTLRTRRLMWAGMLIRMSGGRLPKRIAFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFG 89
            LR+IG +RK+  +R  SY + L    CES+E T+R RRL++AG L R   GRLPKR+ FG L G  +R RGG+E+ W  CV  D++AFG
Sbjct:  162 LRVIGYKRKKDTYRQLSYAQTLRRVECESVEPTIRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLKAFG 250          
BLAST of mRNA_H-elongata_contig15682.3705.1 vs. uniprot
Match: A0A6H5JLT1_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT1_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 4.570e-20
Identity = 44/89 (49.44%), Postives = 59/89 (66.29%), Query Frame = 0
Query:    1 LRIIGTQRKRPDHRMTSYNRALEVTRCESIETTLRTRRLMWAGMLIRMSGGRLPKRIAFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFG 89
             R+IG + K+  +R  SY R LE   C+S+E T+R RRL++AG L R   GRLPKR+ FG L G  +R RGG+E+ W  CV  D++AFG
Sbjct:  425 FRVIGYKLKKDTYRQLSYPRTLERVECQSVEATIRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLKAFG 513          
BLAST of mRNA_H-elongata_contig15682.3705.1 vs. uniprot
Match: A0A6H5KS82_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS82_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 6.620e-20
Identity = 44/89 (49.44%), Postives = 60/89 (67.42%), Query Frame = 0
Query:    1 LRIIGTQRKRPDHRMTSYNRALEVTRCESIETTLRTRRLMWAGMLIRMSGGRLPKRIAFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFG 89
            LR+IG +RK+  +R  SY + L+   C+S+E T+R RRL++AG L R   GRLPKR+ FG L G  +R RGG+E+ W  CV  D+ AFG
Sbjct:  514 LRVIGYKRKKDTYRQLSYAQTLKRFECQSVEATIRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLNAFG 602          
BLAST of mRNA_H-elongata_contig15682.3705.1 vs. uniprot
Match: A0A6H5K1X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1X4_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 1.140e-19
Identity = 43/89 (48.31%), Postives = 60/89 (67.42%), Query Frame = 0
Query:    1 LRIIGTQRKRPDHRMTSYNRALEVTRCESIETTLRTRRLMWAGMLIRMSGGRLPKRIAFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFG 89
            LR+IG +RK+  +R  SY + L+   C+S+E T+R RRL++AG L R   GRLPKR+  G L G  +R RGG+E+ W  CV  D++AFG
Sbjct:  186 LRVIGYKRKKDTYRQLSYAQTLKRVECQSVEATIRQRRLLFAGALARQPDGRLPKRLMLGELAGGEKRRRGGQEQNWPKCVLDDLKAFG 274          
BLAST of mRNA_H-elongata_contig15682.3705.1 vs. uniprot
Match: UPI001AA1A1FE (hypothetical protein n=1 Tax=Vibrio parahaemolyticus TaxID=670 RepID=UPI001AA1A1FE)

HSP 1 Score: 87.8 bits (216), Expect = 1.260e-19
Identity = 45/92 (48.91%), Postives = 58/92 (63.04%), Query Frame = 0
Query:    1 LRIIGTQRK-RPDHRMTSYNRALEVTRCESIETTLRTRRLMWAGMLIRMSGGRLPKRIAFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFGIT 91
            LR+IG QR+ R DH   SY +AL +TRCESIETT+R RRL +AG ++R   GRLP R+ FG + G      GG+ K W   +  D+R F  T
Sbjct:   36 LRVIGFQRRLRTDHTTLSYAKALRITRCESIETTIRKRRLFFAGAVVRQHEGRLPSRLMFGTIAGGGSPKPGGQPKTWPRAIAEDLRVFKAT 127          
BLAST of mRNA_H-elongata_contig15682.3705.1 vs. uniprot
Match: A0A6H5K2V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2V4_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 1.310e-17
Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 0
Query:    1 LRIIGTQRKRPDHRMTSYNRALEVTRCESIETTLRTRRLMWAGMLIRMSGGRLPKRIAFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFG 89
            LR+IG +RK+  +R  SY +A +   C+S+E T+R RRL+ A  L R   GRLPKR+  G L G  +R RGG+++ W  CV  D++AFG
Sbjct:  142 LRVIGYKRKKDTYRQLSYAQAPKRVECQSVEATIRQRRLLLARALARQPDGRLPKRLMLGELAGGEKRRRGGQKQNWPKCVLDDLKAFG 230          
BLAST of mRNA_H-elongata_contig15682.3705.1 vs. uniprot
Match: UPI001AA1AADC (hypothetical protein n=1 Tax=Vibrio parahaemolyticus TaxID=670 RepID=UPI001AA1AADC)

HSP 1 Score: 82.8 bits (203), Expect = 1.480e-17
Identity = 45/89 (50.56%), Postives = 56/89 (62.92%), Query Frame = 0
Query:    4 IGTQRK-RPDHRMTSYNRALEVTRCESIETTLRTRRLMWAGMLIRMSGGRLPKRIAFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFGIT 91
            IG QR+ R DH   SY +AL++TRCESIETT+R RRL +AG + R S  RLP R+ FG + G      GG+ K W  CV  D+R F  T
Sbjct:    1 IGFQRRLRTDHATLSYAKALKMTRCESIETTIRKRRLFFAGGVARQSKDRLPSRVMFGTIAGGENPRPGGQVKTWHRCVVEDLREFRAT 89          
BLAST of mRNA_H-elongata_contig15682.3705.1 vs. uniprot
Match: A0A6H5KLX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLX9_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 1.580e-17
Identity = 42/97 (43.30%), Postives = 61/97 (62.89%), Query Frame = 0
Query:    1 LRIIGTQRKRPDHRMTSYNRALEVTRCESIETTLRTRRLMWAGMLIRMSGGRLPKRIAFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFG---ITGDW 94
            LR+IG +RKR  +R  SY +AL+   C+S+E T+R RRL++AG + R   GRLPKR+ FG L G    G+G  E+ W  C++ D++ F    + G W
Sbjct:  192 LRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGEDPGQGNPEQNWLTCLKDDMKMFEARELRGSW 288          
BLAST of mRNA_H-elongata_contig15682.3705.1 vs. uniprot
Match: A0A6H5JLH5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLH5_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 1.650e-17
Identity = 40/88 (45.45%), Postives = 58/88 (65.91%), Query Frame = 0
Query:    1 LRIIGTQRKRPDHRMTSYNRALEVTRCESIETTLRTRRLMWAGMLIRMSGGRLPKRIAFGNLEGAVRRGRGGKEKEWTDCVQSDIRAF 88
            LR+IG +RKR  +R  SY +AL+   C+S+E T+R RRL++AG + R   GRLPKR+ FG L G    G+G  E+ W  C++ D++ F
Sbjct:  141 LRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGEDPGQGNPEQNWLTCLKDDMKMF 228          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15682.3705.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYE2_9PHAE4.610e-2249.44Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JAH7_9PHAE1.070e-2150.56Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLT1_9PHAE4.570e-2049.44Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KS82_9PHAE6.620e-2049.44Reverse transcriptase domain-containing protein (F... [more]
A0A6H5K1X4_9PHAE1.140e-1948.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001AA1A1FE1.260e-1948.91hypothetical protein n=1 Tax=Vibrio parahaemolytic... [more]
A0A6H5K2V4_9PHAE1.310e-1746.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001AA1AADC1.480e-1750.56hypothetical protein n=1 Tax=Vibrio parahaemolytic... [more]
A0A6H5KLX9_9PHAE1.580e-1743.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLH5_9PHAE1.650e-1745.45Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15682contigH-elongata_contig15682:7337..7630 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15682.3705.1mRNA_H-elongata_contig15682.3705.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15682 7337..7632 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15682.3705.1 ID=prot_H-elongata_contig15682.3705.1|Name=mRNA_H-elongata_contig15682.3705.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=98bp
LRIIGTQRKRPDHRMTSYNRALEVTRCESIETTLRTRRLMWAGMLIRMSG
GRLPKRIAFGNLEGAVRRGRGGKEKEWTDCVQSDIRAFGITGDWKAIA
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