prot_H-elongata_contig15681.3704.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig15681.3704.1
Unique Name	prot_H-elongata_contig15681.3704.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	313

Homology

[Close]

BLAST of mRNA_H-elongata_contig15681.3704.1 vs. uniprot
Match: D7FU75_ECTSI (CS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU75_ECTSI)

HSP 1 Score: 310 bits (793), Expect = 7.950e-101
Identity = 150/167 (89.82%), Postives = 160/167 (95.81%), Query Frame = 0

Query:  146 IGNGGKTDKYVWTQTLQELSVIVAVPKGSRSRDVVCDITKSRLRVGMRGQPLLIDGEMYNKVKVDDSFWTLEDGKEISIALQKENQMEWWKCVVKGDSEINTSKVQPENSKLGDLDGETRKTVEKMMFDQRQKAQGLPTSDEMGKQEMLKKFMAQHPEMDFSRAKIS 312
            +GNGG TDKY WTQTLQELSV+V VP+GS+SRDVVCDITKSRLRVG++GQPLL+DGEMYNKVKVDDSFWTLEDGKE+SIALQKENQMEWWKCVVKGD EINTSKVQPENSKL +LDGETRKTVEKMMFDQRQKAQGLPT+DEM KQEML KFMAQHPEMDFSRAKIS
Sbjct:  212 VGNGGSTDKYDWTQTLQELSVVVPVPEGSKSRDVVCDITKSRLRVGLKGQPLLVDGEMYNKVKVDDSFWTLEDGKEVSIALQKENQMEWWKCVVKGDPEINTSKVQPENSKLSELDGETRKTVEKMMFDQRQKAQGLPTADEMSKQEMLGKFMAQHPEMDFSRAKIS 378

[Close]

BLAST of mRNA_H-elongata_contig15681.3704.1 vs. uniprot
Match: A0A835Z5V7_9STRA (HSP20-like chaperone n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V7_9STRA)

HSP 1 Score: 261 bits (667), Expect = 1.140e-82
Identity = 125/180 (69.44%), Postives = 154/180 (85.56%), Query Frame = 0

Query:  136 KVDDDGA---PPPIGNGGKTDKYVWTQTLQELSVIVAVPKGSRSRDVVCDITKSRLRVGMRGQPLLIDGEMYNKVKVDDSFWTLEDGKEISIALQKENQMEWWKCVVKGDSEINTSKVQPENSKLGDLDGETRKTVEKMMFDQRQKAQGLPTSDEMGKQEMLKKFMAQHPEMDFSRAKIS 312
            K +D+G     PP GNGG+TD YVWTQTL ELSV + VP G++SRDVVC I++  L+ G++GQP ++DG+++ KV V+DSFWTLED +EISIALQK+NQMEWWK V++GD+EI+T+KVQPENSKL DLD +TRKTVEKMMFDQRQKA GLPT+DEM KQE+LKKFM QHPEMDFS+AKI+
Sbjct:  135 KAEDEGTNVEKPPEGNGGRTDTYVWTQTLSELSVTIPVPPGTKSRDVVCTISRQHLKAGLKGQPPIVDGDLHKKVIVEDSFWTLEDAREISIALQKDNQMEWWKSVIQGDAEIDTTKVQPENSKLDDLDADTRKTVEKMMFDQRQKAMGLPTADEMQKQELLKKFMDQHPEMDFSKAKIN 314

[Close]

BLAST of mRNA_H-elongata_contig15681.3704.1 vs. uniprot
Match: G4ZU82_PHYSP (CS domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=G4ZU82_PHYSP)

HSP 1 Score: 258 bits (658), Expect = 2.290e-81
Identity = 124/180 (68.89%), Postives = 150/180 (83.33%), Query Frame = 0

Query:  133 SEGKVDDDGAPPPIGNGGKTDKYVWTQTLQELSVIVAVPKGSRSRDVVCDITKSRLRVGMRGQPLLIDGEMYNKVKVDDSFWTLEDGKEISIALQKENQMEWWKCVVKGDSEINTSKVQPENSKLGDLDGETRKTVEKMMFDQRQKAQGLPTSDEMGKQEMLKKFMAQHPEMDFSRAKIS 312
            +EG  ++D  PP +GNGG+TDKYVWTQTLQE  V  AVP+G++SR V  +I   +LRVG+RG    +DG +YNKVKVDDSFWTLEDG  I I LQK+NQMEWWK +++GD+EI+T KVQPENSKL DLD +TR+TVEKMMFDQRQKA GLPTSD+M KQE+L+KFMAQHPEMDFS+AKI+
Sbjct:  131 NEGDEEEDNGPPLVGNGGQTDKYVWTQTLQEAQVNFAVPEGTKSRQVDVEIRAGKLRVGLRGAEPFVDGSLYNKVKVDDSFWTLEDGNRICIYLQKDNQMEWWKTIIQGDAEIDTQKVQPENSKLDDLDSDTRQTVEKMMFDQRQKAMGLPTSDDMQKQEILQKFMAQHPEMDFSKAKIN 310

[Close]

BLAST of mRNA_H-elongata_contig15681.3704.1 vs. uniprot
Match: A0A6G0XJW0_9STRA (CS domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJW0_9STRA)

HSP 1 Score: 256 bits (654), Expect = 8.620e-81
Identity = 122/175 (69.71%), Postives = 144/175 (82.29%), Query Frame = 0

Query:  138 DDDGAPPPIGNGGKTDKYVWTQTLQELSVIVAVPKGSRSRDVVCDITKSRLRVGMRGQPLLIDGEMYNKVKVDDSFWTLEDGKEISIALQKENQMEWWKCVVKGDSEINTSKVQPENSKLGDLDGETRKTVEKMMFDQRQKAQGLPTSDEMGKQEMLKKFMAQHPEMDFSRAKIS 312
            ++DG PP  GNGGKTD YVWTQTLQE  V + VP+G+ S+ VV D+    L+VG++ QPLLIDGE++ K+KV+DSFWTLED   I + LQKENQMEWWKC++ GD EI+T KVQPENSKL DLDGETR+TVEKMMFDQRQK  GLPTSDEM KQE+L KFMA HPEMDFS+AKI+
Sbjct:  134 ENDGTPPLEGNGGKTDVYVWTQTLQEAQVTIPVPQGTVSKQVVVDLRSKTLKVGLKNQPLLIDGELHKKIKVEDSFWTLEDSNRICVYLQKENQMEWWKCIITGDVEIDTKKVQPENSKLSDLDGETRQTVEKMMFDQRQKQMGLPTSDEMSKQEILNKFMAAHPEMDFSKAKIN 308

[Close]

BLAST of mRNA_H-elongata_contig15681.3704.1 vs. uniprot
Match: A0A024TE88_9STRA (CS domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TE88_9STRA)

HSP 1 Score: 256 bits (654), Expect = 1.180e-80
Identity = 120/174 (68.97%), Postives = 144/174 (82.76%), Query Frame = 0

Query:  139 DDGAPPPIGNGGKTDKYVWTQTLQELSVIVAVPKGSRSRDVVCDITKSRLRVGMRGQPLLIDGEMYNKVKVDDSFWTLEDGKEISIALQKENQMEWWKCVVKGDSEINTSKVQPENSKLGDLDGETRKTVEKMMFDQRQKAQGLPTSDEMGKQEMLKKFMAQHPEMDFSRAKIS 312
            DDGAPP  GNGGKTD YVWTQTLQE  V + VP+G+ S+ VV D+    L+VG++ QPL++DG+++ K+KV+DSFWTLED   I + LQKENQMEWWKC++ GD EI+T KVQPENSKL DLDGETR+TVEKMMFDQRQK  GLPTSDE+GKQE+L KFM  HPEMDFS+AKI+
Sbjct:  145 DDGAPPLEGNGGKTDNYVWTQTLQEAHVTIPVPQGTTSKQVVVDLRSKTLKVGLKSQPLIVDGDLHKKIKVEDSFWTLEDNNRICVYLQKENQMEWWKCIMVGDVEIDTKKVQPENSKLSDLDGETRQTVEKMMFDQRQKQMGLPTSDELGKQEILNKFMKAHPEMDFSKAKIN 318

[Close]

BLAST of mRNA_H-elongata_contig15681.3704.1 vs. uniprot
Match: A0A1W0A2R2_9STRA (Nuclear migration protein nudC n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2R2_9STRA)

HSP 1 Score: 254 bits (649), Expect = 5.380e-80
Identity = 121/166 (72.89%), Postives = 140/166 (84.34%), Query Frame = 0

Query:  147 GNGGKTDKYVWTQTLQELSVIVAVPKGSRSRDVVCDITKSRLRVGMRGQPLLIDGEMYNKVKVDDSFWTLEDGKEISIALQKENQMEWWKCVVKGDSEINTSKVQPENSKLGDLDGETRKTVEKMMFDQRQKAQGLPTSDEMGKQEMLKKFMAQHPEMDFSRAKIS 312
            GNGGKT+ YVWTQTLQE  V +AVP G+ SR V  DI    L+VG++GQPLL+DGE++ +VKV+DSFWTLEDG  I I LQKENQMEWWKCV+ GD EINT KVQPENSKL DLDG+TR+TVEKMMFDQRQK  GLPTSDE+ KQE+LKKFM+ HPEMDFS+AKI+
Sbjct:  146 GNGGKTEHYVWTQTLQEAHVSIAVPNGTTSRMVAVDIRAQTLKVGLKGQPLLVDGELHKRVKVEDSFWTLEDGNRICIYLQKENQMEWWKCVINGDPEINTKKVQPENSKLSDLDGDTRQTVEKMMFDQRQKQMGLPTSDELSKQEILKKFMSAHPEMDFSKAKIN 311

[Close]

BLAST of mRNA_H-elongata_contig15681.3704.1 vs. uniprot
Match: A0A067CPV9_SAPPC (CS domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CPV9_SAPPC)

HSP 1 Score: 254 bits (648), Expect = 7.620e-80
Identity = 121/171 (70.76%), Postives = 143/171 (83.63%), Query Frame = 0

Query:  142 APPPIGNGGKTDKYVWTQTLQELSVIVAVPKGSRSRDVVCDITKSRLRVGMRGQPLLIDGEMYNKVKVDDSFWTLEDGKEISIALQKENQMEWWKCVVKGDSEINTSKVQPENSKLGDLDGETRKTVEKMMFDQRQKAQGLPTSDEMGKQEMLKKFMAQHPEMDFSRAKIS 312
            +PP  GNGGKT+ YVWTQTLQE  V +AVP G+ SR V  DI    L+VG++GQPLL+DGE++ ++KV+DSFWTLEDG  I I LQKENQMEWWK V++GD EINT KVQPENSKL DLDG+TR+TVEKMMFDQRQK  GLPTSDE+ KQE+LKKFMA HPEMDFS+AK++
Sbjct:  141 SPPLEGNGGKTEHYVWTQTLQEAHVSIAVPNGTTSRQVFADIRAKTLKVGLKGQPLLVDGELHKRIKVEDSFWTLEDGNRICIYLQKENQMEWWKNVIQGDPEINTKKVQPENSKLSDLDGDTRQTVEKMMFDQRQKQMGLPTSDELSKQEILKKFMAAHPEMDFSKAKLN 311

[Close]

BLAST of mRNA_H-elongata_contig15681.3704.1 vs. uniprot
Match: D0NYI0_PHYIT (Nuclear migration protein nudC, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NYI0_PHYIT)

HSP 1 Score: 253 bits (646), Expect = 1.110e-79
Identity = 120/175 (68.57%), Postives = 147/175 (84.00%), Query Frame = 0

Query:  138 DDDGAPPPIGNGGKTDKYVWTQTLQELSVIVAVPKGSRSRDVVCDITKSRLRVGMRGQPLLIDGEMYNKVKVDDSFWTLEDGKEISIALQKENQMEWWKCVVKGDSEINTSKVQPENSKLGDLDGETRKTVEKMMFDQRQKAQGLPTSDEMGKQEMLKKFMAQHPEMDFSRAKIS 312
            ++D  PP +GNGG+TDKYVWTQTLQE  +  AVP+G++SR V  +I   +LRVG+RG    +DG +YNKVK+DDSFWTLEDG  I I LQK+NQMEWWK +V+GD+EI+T KVQPENSKL DLD +TR+TVEKMMFDQRQKA GLP+SDEM KQE+L+KFMAQHPEMDFS+AK++
Sbjct:  127 EEDNGPPLVGNGGQTDKYVWTQTLQEAQINFAVPEGTKSRQVDVEIRAGKLRVGLRGGETFVDGPLYNKVKMDDSFWTLEDGNRICIYLQKDNQMEWWKTIVQGDAEIDTQKVQPENSKLDDLDSDTRQTVEKMMFDQRQKAMGLPSSDEMQKQEILQKFMAQHPEMDFSKAKVN 301

[Close]

BLAST of mRNA_H-elongata_contig15681.3704.1 vs. uniprot
Match: A0A484DVX6_BRELC (CS domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DVX6_BRELC)

HSP 1 Score: 251 bits (641), Expect = 8.670e-79
Identity = 119/175 (68.00%), Postives = 145/175 (82.86%), Query Frame = 0

Query:  138 DDDGAPPPIGNGGKTDKYVWTQTLQELSVIVAVPKGSRSRDVVCDITKSRLRVGMRGQPLLIDGEMYNKVKVDDSFWTLEDGKEISIALQKENQMEWWKCVVKGDSEINTSKVQPENSKLGDLDGETRKTVEKMMFDQRQKAQGLPTSDEMGKQEMLKKFMAQHPEMDFSRAKIS 312
            D++  P  +GNGG+T+KYVWTQTLQE  V  AVP G++SR V  +I   +LRVG+RG+   +DG +YNKVKVDDSFWTLEDG  I + LQK+NQMEWWK +++GD EI+T KVQPENSKL DLD +TR+TVEKMMFDQRQKA GLPTSD+M KQEML+KFMAQHPEMDFS+AK++
Sbjct:  137 DEESGPSLVGNGGRTEKYVWTQTLQEAQVNFAVPAGTKSRQVDVEIRAGKLRVGLRGENTFVDGNLYNKVKVDDSFWTLEDGNRICVYLQKDNQMEWWKTIIQGDPEIDTQKVQPENSKLNDLDADTRQTVEKMMFDQRQKAMGLPTSDDMQKQEMLQKFMAQHPEMDFSKAKMN 311

[Close]

BLAST of mRNA_H-elongata_contig15681.3704.1 vs. uniprot
Match: K3WSX9_GLOUD (CS domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSX9_GLOUD)

HSP 1 Score: 251 bits (640), Expect = 1.840e-78
Identity = 117/170 (68.82%), Postives = 145/170 (85.29%), Query Frame = 0

Query:  143 PPPIGNGGKTDKYVWTQTLQELSVIVAVPKGSRSRDVVCDITKSRLRVGMRGQPLLIDGEMYNKVKVDDSFWTLEDGKEISIALQKENQMEWWKCVVKGDSEINTSKVQPENSKLGDLDGETRKTVEKMMFDQRQKAQGLPTSDEMGKQEMLKKFMAQHPEMDFSRAKIS 312
            P PIGNGG+TDKYVWTQTLQE  V  AVP+G++SR V  DIT ++L+VG++G    +DG ++ K+KVDDSFWTLEDG  I + LQK+NQMEWWK +++GD+EI+T KVQPENSKL DLD +TR+TVEKMMFDQ+QKA GLPTSD++ KQE+LKKFMAQHPEMDFS+AKI+
Sbjct:  155 PAPIGNGGQTDKYVWTQTLQEAQVNFAVPEGTKSRQVAVDITATKLKVGLKGGETFVDGPLFKKIKVDDSFWTLEDGSRICVYLQKDNQMEWWKTIIQGDAEIDTKKVQPENSKLADLDSDTRQTVEKMMFDQKQKALGLPTSDDIQKQEVLKKFMAQHPEMDFSKAKIN 324

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig15681.3704.1 vs. uniprot

BLAST of mRNA_H-elongata_contig15681.3704.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FU75_ECTSI	7.950e-101	89.82	CS domain-containing protein n=2 Tax=Ectocarpus Ta...	[more]
A0A835Z5V7_9STRA	1.140e-82	69.44	HSP20-like chaperone n=1 Tax=Tribonema minus TaxID...	[more]
G4ZU82_PHYSP	2.290e-81	68.89	CS domain-containing protein n=15 Tax=Phytophthora...	[more]
A0A6G0XJW0_9STRA	8.620e-81	69.71	CS domain-containing protein n=1 Tax=Aphanomyces e...	[more]
A0A024TE88_9STRA	1.180e-80	68.97	CS domain-containing protein n=2 Tax=Aphanomyces i...	[more]
A0A1W0A2R2_9STRA	5.380e-80	72.89	Nuclear migration protein nudC n=1 Tax=Thraustothe...	[more]
A0A067CPV9_SAPPC	7.620e-80	70.76	CS domain-containing protein n=2 Tax=Saprolegnia T...	[more]
D0NYI0_PHYIT	1.110e-79	68.57	Nuclear migration protein nudC, putative n=1 Tax=P...	[more]
A0A484DVX6_BRELC	8.670e-79	68.00	CS domain-containing protein n=1 Tax=Bremia lactuc...	[more]
K3WSX9_GLOUD	1.840e-78	68.82	CS domain-containing protein n=1 Tax=Globisporangi...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 3..53
None	No IPR available	PANTHER	PTHR12356:SF3	NUCLEAR MIGRATION PROTEIN NUDC	coord: 11..312
IPR007052	CS domain	PFAM	PF04969	CS	coord: 154..228 e-value: 1.7E-16 score: 61.0
IPR007052	CS domain	PROSITE	PS51203	CS	coord: 150..239 score: 16.645
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 147..272 e-value: 6.4E-42 score: 144.6
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 140..254
IPR037898	NudC family	PANTHER	PTHR12356	NUCLEAR MOVEMENT PROTEIN NUDC	coord: 11..312

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig15681	contig	H-elongata_contig15681:1652..6577 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig15681.3704.1	mRNA_H-elongata_contig15681.3704.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig15681 440..6577 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig15681.3704.1 ID=prot_H-elongata_contig15681.3704.1|Name=mRNA_H-elongata_contig15681.3704.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=313bp
KVVRRQKAVADKEKAERKRAKEANERRRAEKRAATLAKQKEEQEERKRKM
DQQDTPGIVEVGKDGSFDVESAATFDASEWCCFCCPCVSSQQQKAVASTG
ASTEGLHATTPVEVEKKSGSLALPPGGEKKRESEGKVDDDGAPPPIGNGG
KTDKYVWTQTLQELSVIVAVPKGSRSRDVVCDITKSRLRVGMRGQPLLID
GEMYNKVKVDDSFWTLEDGKEISIALQKENQMEWWKCVVKGDSEINTSKV
QPENSKLGDLDGETRKTVEKMMFDQRQKAQGLPTSDEMGKQEMLKKFMAQ
HPEMDFSRAKIS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007052	CS_dom
IPR008978	HSP20-like_chaperone
IPR037898	NudC_fam