prot_H-elongata_contig156793.3703.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig156793.3703.1
Unique Nameprot_H-elongata_contig156793.3703.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length198
Homology
BLAST of mRNA_H-elongata_contig156793.3703.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 1.440e-42
Identity = 108/202 (53.47%), Postives = 137/202 (67.82%), Query Frame = 0
Query:    3 YGVKDNEHANVWKRLHKEAVKIALLSRKDKSSTXXXXXXXXXXXXXXXXXXXXXXXXXSRVGGFMAA-------ARLAGRAPTQQVGRGADDSTTSLIINSVRPEVEAYQAAPGMKINEEGKVGNASSWMYLDPLEFWRVRTADSLHLSSLARRMLVIPATQTESKRLFSCAGNIVTKNRNKLASTAVELLVLLRLAWGVVD 197
            YGV ++E A+VWK + +EAVKIA+ +R  ++S         XXXXXXXXXXXXXXXXX                A+  G A T Q+  GAD S   LI +SVR E+ A++ + G+K+ EE K G   + +YLDPL++WRVR AD  HL++LARR+L IPATQ ES+RLFSCAGNIVTKNRN LA T VELLVLLR +W +V+
Sbjct:   93 YGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFVRLITSSVRVELTAFKVSTGIKMYEEDKEG---AKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVE 291          
BLAST of mRNA_H-elongata_contig156793.3703.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 4.920e-18
Identity = 42/61 (68.85%), Postives = 51/61 (83.61%), Query Frame = 0
Query:  137 TADSLHLSSLARRMLVIPATQTESKRLFSCAGNIVTKNRNKLASTAVELLVLLRLAWGVVD 197
            + D  HL++LARR+L IPATQ +S+RLFSCAGNIVTKNRN LA T VELLVLLR +W +V+
Sbjct:  151 STDFPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTTVELLVLLRHSWKIVE 211          
BLAST of mRNA_H-elongata_contig156793.3703.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 2.080e-11
Identity = 49/162 (30.25%), Postives = 75/162 (46.30%), Query Frame = 0
Query:    3 YGVKDNEHANVWKRLHKEAVKIALLS-RKDKSSTXXXXXXXXXXXXXXXXXXXXXXXXXSRVGGFMAAARLAGRAPTQQVGRGADDSTTSLIINSVRPEVEAYQAAPGMKINEEGKVGNASSWMYLDPLEFWRVRTADSLHLSSLARRMLVIPATQTESKRL 163
            YG++  EHA+VW+ +  +AV IA      D ++T                         +R+  F AAA     A     G    D     + + V  EV ++Q  PG+ I   G  G     +Y DPL++WR R  +  HL++LARR+L IP++Q  S+R+
Sbjct:  391 YGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAPAAQPVGTPPVAPGGQGAPKRARLSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKK---VYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549          
BLAST of mRNA_H-elongata_contig156793.3703.1 vs. uniprot
Match: UPI001C9A9669 (E3 SUMO-protein ligase ZBED1-like n=2 Tax=Colletes gigas TaxID=935657 RepID=UPI001C9A9669)

HSP 1 Score: 68.9 bits (167), Expect = 3.100e-10
Identity = 37/95 (38.95%), Postives = 51/95 (53.68%), Query Frame = 0
Query:   95 NSVRPEVEAYQAAPGMKINEEGKVGNASSWMYLDPLEFWRVRTADSLHLSSLARRMLVIPATQTESKRLFSCAGNIVTKNRNKLASTAVELLVLL 189
            N V  ++E Y   P ++ +             L+P E+W+ RT     +S +A++ L IPAT   S+R FSCAGNIVTK RN+L    V  LV L
Sbjct:  394 NDVYIQIETYMTEPQLRFD-------------LNPFEWWKARTNKYPAISEVAKKYLTIPATSAMSERCFSCAGNIVTKKRNRLLPENVNTLVFL 475          
BLAST of mRNA_H-elongata_contig156793.3703.1 vs. uniprot
Match: UPI0008114DE5 (zinc finger BED domain-containing protein 1-like n=1 Tax=Rhagoletis zephyria TaxID=28612 RepID=UPI0008114DE5)

HSP 1 Score: 65.5 bits (158), Expect = 4.380e-9
Identity = 30/69 (43.48%), Postives = 46/69 (66.67%), Query Frame = 0
Query:  128 DPLEFWRVRTADSLHLSSLARRMLVIPATQTESKRLFSCAGNIVTKNRNKLASTAVELLVLL-RLAWGV 195
            DPLE+W+ RT+D  HL  LA R L IPAT +ES+R+FS AG +++  R +L    V +L+ + + +W +
Sbjct:  332 DPLEYWKTRTSDMRHLQILALRYLCIPATSSESERMFSKAGAVISDRRTRLKEKNVNMLLFINKNSWMI 400          
BLAST of mRNA_H-elongata_contig156793.3703.1 vs. uniprot
Match: UPI001781ECFA (zinc finger BED domain-containing protein 1-like n=1 Tax=Rhagoletis pomonella TaxID=28610 RepID=UPI001781ECFA)

HSP 1 Score: 65.5 bits (158), Expect = 5.040e-9
Identity = 30/69 (43.48%), Postives = 46/69 (66.67%), Query Frame = 0
Query:  128 DPLEFWRVRTADSLHLSSLARRMLVIPATQTESKRLFSCAGNIVTKNRNKLASTAVELLVLL-RLAWGV 195
            DPLE+W+ RT+D  HL  LA R L IPAT +ES+R+FS AG +++  R +L    V +L+ + + +W +
Sbjct:  488 DPLEYWKTRTSDMRHLQILALRYLCIPATSSESERMFSKAGAVISDRRTRLKEKNVNMLLFINKNSWMI 556          
BLAST of mRNA_H-elongata_contig156793.3703.1 vs. uniprot
Match: UPI001C8A52CE (zinc finger BED domain-containing protein 4-like n=1 Tax=Drosophila bipectinata TaxID=42026 RepID=UPI001C8A52CE)

HSP 1 Score: 64.3 bits (155), Expect = 6.870e-9
Identity = 27/70 (38.57%), Postives = 45/70 (64.29%), Query Frame = 0
Query:  128 DPLEFWRVRTADSLHLSSLARRMLVIPATQTESKRLFSCAGNIVTKNRNKLASTAVELLVLLRLAWGVVD 197
            +PLE+WR   +D   L+ LA++ L +PAT TES+R+FS AG I+++ R+ L    V+ L+ +   W + +
Sbjct:  210 NPLEYWRSNESDQPALAKLAKKALCVPATSTESERMFSKAGQIISERRSSLKPNIVDQLLFINKNWWITE 279          
BLAST of mRNA_H-elongata_contig156793.3703.1 vs. uniprot
Match: UPI0008113823 (zinc finger BED domain-containing protein 1-like n=1 Tax=Rhagoletis zephyria TaxID=28612 RepID=UPI0008113823)

HSP 1 Score: 64.7 bits (156), Expect = 7.710e-9
Identity = 30/69 (43.48%), Postives = 45/69 (65.22%), Query Frame = 0
Query:  128 DPLEFWRVRTADSLHLSSLARRMLVIPATQTESKRLFSCAGNIVTKNRNKLASTAVELLVLL-RLAWGV 195
            DPLEFW+ RT+D  HL  LA R L IPAT +ES+R+FS AG +++    +L    V +L+ + + +W +
Sbjct:  308 DPLEFWKTRTSDMRHLQILALRYLCIPATSSESERMFSKAGAVISDRHTRLKEKNVSMLLFINKNSWMI 376          
BLAST of mRNA_H-elongata_contig156793.3703.1 vs. uniprot
Match: A0A6J8CHD8_MYTCO (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8CHD8_MYTCO)

HSP 1 Score: 63.2 bits (152), Expect = 2.760e-8
Identity = 29/62 (46.77%), Postives = 43/62 (69.35%), Query Frame = 0
Query:  128 DPLEFWRVRTADSLHLSSLARRMLVIPATQTESKRLFSCAGNIVTKNRNKLASTAVELLVLL 189
            +PLE+W+        LS LAR+ L IPAT   S+R+FSCAG I TK RN+L+S+ ++ +++L
Sbjct:  335 NPLEWWKENNCKFPRLSVLARQYLSIPATSVPSERIFSCAGLIATKLRNRLSSSVIDQIIIL 396          
BLAST of mRNA_H-elongata_contig156793.3703.1 vs. uniprot
Match: A0A154PK43_DUFNO (Zinc finger BED domain-containing protein 4 n=1 Tax=Dufourea novaeangliae TaxID=178035 RepID=A0A154PK43_DUFNO)

HSP 1 Score: 62.8 bits (151), Expect = 3.770e-8
Identity = 34/108 (31.48%), Postives = 58/108 (53.70%), Query Frame = 0
Query:   86 DDSTTSLIINSVRPEVEAYQAAPGMKINEEGKVGN----ASSWMYLDPLEFWRVRTADSLHLSSLARRMLVIPATQTESKRLFSCAGNIVTKNRNKLASTAVELLVLL 189
            DD + S   +  +  V A+      +++E  ++ N        +  DP+E+W++       LS LA+++L  PAT   S+R+FS AGNIV+K RN+L  + V  ++ L
Sbjct:  302 DDESISSFWSDFKTMVSAHNCCNTDELSEVAELDNYLKERIEVLESDPVEYWKINAIRYPKLSKLAQKLLCCPATSVPSERIFSKAGNIVSKKRNRLKDSTVNKMLFL 409          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig156793.3703.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWI1_9PHAE1.440e-4253.47Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JPB0_9PHAE4.920e-1868.85Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5KUY5_9PHAE2.080e-1130.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001C9A96693.100e-1038.95E3 SUMO-protein ligase ZBED1-like n=2 Tax=Colletes... [more]
UPI0008114DE54.380e-943.48zinc finger BED domain-containing protein 1-like n... [more]
UPI001781ECFA5.040e-943.48zinc finger BED domain-containing protein 1-like n... [more]
UPI001C8A52CE6.870e-938.57zinc finger BED domain-containing protein 4-like n... [more]
UPI00081138237.710e-943.48zinc finger BED domain-containing protein 1-like n... [more]
A0A6J8CHD8_MYTCO2.760e-846.77Dimer_Tnp_hAT domain-containing protein n=1 Tax=My... [more]
A0A154PK43_DUFNO3.770e-831.48Zinc finger BED domain-containing protein 4 n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008906HAT, C-terminal dimerisation domainPFAMPF05699Dimer_Tnp_hATcoord: 111..190
e-value: 3.3E-12
score: 46.0
NoneNo IPR availablePANTHERPTHR47611FAMILY NOT NAMEDcoord: 127..190
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 127..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig156793contigH-elongata_contig156793:452..1045 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig156793.3703.1mRNA_H-elongata_contig156793.3703.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig156793 84..1403 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig156793.3703.1 ID=prot_H-elongata_contig156793.3703.1|Name=mRNA_H-elongata_contig156793.3703.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=198bp
MPYGVKDNEHANVWKRLHKEAVKIALLSRKDKSSTGGSSQQLATAAPSGA
ASGGSSSKKRSRVGGFMAAARLAGRAPTQQVGRGADDSTTSLIINSVRPE
VEAYQAAPGMKINEEGKVGNASSWMYLDPLEFWRVRTADSLHLSSLARRM
LVIPATQTESKRLFSCAGNIVTKNRNKLASTAVELLVLLRLAWGVVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008906HATC_C_dom
IPR012337RNaseH-like_sf