prot_H-elongata_contig156444.3681.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig156444.3681.1
Unique Nameprot_H-elongata_contig156444.3681.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length93
Homology
BLAST of mRNA_H-elongata_contig156444.3681.1 vs. uniprot
Match: A0A6H5K0D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0D3_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 1.990e-34
Identity = 71/85 (83.53%), Postives = 81/85 (95.29%), Query Frame = 0
Query:    9 ERDALVERMMEKDETKTKRLELGGLTPAQVSELATRGKVTSDAGGGDDLSTKELREMSRQMYLPKRAEKELKLLEAQLRDEEELF 93
            ERDALVERMMEKD++KTK++ELGGLTPAQ+SELATRGKVTS++G   DL+TKELRE+SRQMYLPKRAEKELKLLEAQL+DEE LF
Sbjct:  287 ERDALVERMMEKDKSKTKQMELGGLTPAQISELATRGKVTSESGEQRDLTTKELREISRQMYLPKRAEKELKLLEAQLQDEESLF 371          
BLAST of mRNA_H-elongata_contig156444.3681.1 vs. uniprot
Match: D8LHZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ7_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 8.240e-33
Identity = 69/85 (81.18%), Postives = 81/85 (95.29%), Query Frame = 0
Query:    9 ERDALVERMMEKDETKTKRLELGGLTPAQVSELATRGKVTSDAGGGDDLSTKELREMSRQMYLPKRAEKELKLLEAQLRDEEELF 93
            ERDALVERM++KD++KTK++ELGGLTPAQ+SELATRGKVTS++G   DL+TKELRE+SRQMYLPKRAEKELKLLEAQL+DEE LF
Sbjct:  217 ERDALVERMLDKDKSKTKQMELGGLTPAQISELATRGKVTSESGEQRDLTTKELREISRQMYLPKRAEKELKLLEAQLQDEESLF 301          
BLAST of mRNA_H-elongata_contig156444.3681.1 vs. uniprot
Match: A0A835YTF2_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTF2_9STRA)

HSP 1 Score: 110 bits (276), Expect = 2.480e-26
Identity = 66/94 (70.21%), Postives = 76/94 (80.85%), Query Frame = 0
Query:    6 DLDERDALVERMMEKDETKTKRLELGGLTPAQVSELATRGKVTSDAGGGD------DLSTKELREMSRQMYLPKRAEKELKLLEAQLRDEEELF 93
            DL+ERDALVERMME+D++KTK  ELGGLTPAQV ELATRG V   AGGG       +LS  E+R +SRQ+YLPKRA+KEL+LLE QLRDEEELF
Sbjct:  175 DLEERDALVERMMERDKSKTKSAELGGLTPAQVQELATRG-VLRGAGGGXXXXXXXELSMAEMRALSRQVYLPKRADKELRLLEMQLRDEEELF 267          
BLAST of mRNA_H-elongata_contig156444.3681.1 vs. uniprot
Match: A0A7S2STE0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STE0_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.300e-18
Identity = 53/93 (56.99%), Postives = 68/93 (73.12%), Query Frame = 0
Query:    1 MERERDLDERDALVERMMEKDETKTKRLELGGLTPAQVSELATRGKVTSDAGGGDDLSTKELREMSRQMYLPKRAEKELKLLEAQLRDEEELF 93
            +ERE+DL ERD LVERM E+D  KTK+ + GGLT  QV ELATRG V+       DLS +++RE+SR++YL KR  KEL+L E  LRDEE++F
Sbjct:   12 VEREKDLRERDELVERMRERDTQKTKKFDNGGLTDEQVKELATRGTVSESK----DLSVEQMREVSRRLYLQKREAKELELAERGLRDEEDMF 100          
BLAST of mRNA_H-elongata_contig156444.3681.1 vs. uniprot
Match: A0A7S3H044_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H044_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.630e-17
Identity = 56/92 (60.87%), Postives = 66/92 (71.74%), Query Frame = 0
Query:    3 RERDLDERDALVERMMEKDETKTKRLEL-GGLTPAQVSELATRGKVTSDAGGGDDLSTKELREMSRQMYLPKRAEKELKLLEAQLRDEEELF 93
            RE DL ERDA V R+MEKDE++TK+ E   GL+  Q+ ELATRG + SD G G   +  +LRE+SRQ YL KR EKELKLLE  LRDE ELF
Sbjct:   97 REIDLAERDAFVNRLMEKDESRTKKQEQEAGLSAQQIHELATRGAL-SDKGAGTS-TIDQLREISRQHYLEKREEKELKLLEMSLRDEAELF 186          
BLAST of mRNA_H-elongata_contig156444.3681.1 vs. uniprot
Match: A0A7S1XPJ3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPJ3_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.850e-13
Identity = 40/88 (45.45%), Postives = 61/88 (69.32%), Query Frame = 0
Query:    6 DLDERDALVERMMEKDETKTKRLELGGLTPAQVSELATRGKVTSDAGGGDDLSTKELREMSRQMYLPKRAEKELKLLEAQLRDEEELF 93
            D+ ERDA+VERM+++D+ KT++   GG+T AQ   +A R    +    G++L+   LRE+SRQ+YL KR EKEL L + +L +E++LF
Sbjct:   59 DIAERDAMVERMLQRDDDKTRKAARGGMTAAQEEAVAARQAAEAGIPKGEELTVDRLREISRQVYLKKREEKELMLAQMELEEEDDLF 146          
BLAST of mRNA_H-elongata_contig156444.3681.1 vs. uniprot
Match: A0A662WSU0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WSU0_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 2.060e-12
Identity = 51/104 (49.04%), Postives = 64/104 (61.54%), Query Frame = 0
Query:    2 ERERDLDERDALVERMMEKDETKTKR----------LELGGLTPAQVSELATRGKVTSDAGGGDDLSTK--ELREMSRQMYLPKRAEKELKLLEAQLRDEEELF 93
            ER  D +ERDA  ER+ ++DE +TKR             GGLT  ++S+LA RG V     G D +S K   LRE+SRQ YL KR EKEL+LLE QL+DE+ LF
Sbjct:   73 ERRHDREERDAFAERLRQRDEDRTKRRRTAEEPDDAAHTGGLTAGEISQLAKRGAVGE---GTDAISEKLARLRELSRQEYLKKREEKELELLEFQLKDEDVLF 173          
BLAST of mRNA_H-elongata_contig156444.3681.1 vs. uniprot
Match: D0NNB4_PHYIT (Pre-mRNA-splicing factor ATP-dependent RNA helicase, putative n=21 Tax=Peronosporaceae TaxID=4777 RepID=D0NNB4_PHYIT)

HSP 1 Score: 67.0 bits (162), Expect = 6.360e-11
Identity = 49/99 (49.49%), Postives = 63/99 (63.64%), Query Frame = 0
Query:    2 ERERDLDERDALVERMMEKDETKTKRLELG-------GLTPAQVSELATRGKVTSDAGGGDDLSTKELREMSRQMYLPKRAEKELKLLEAQLRDEEELF 93
            ER RD +ERDA  ER+ ++DE +TK            GLT  ++ +LA RG  T DA   + L+  +LRE+SRQ YL KR EKEL+LLE QLRDE+ LF
Sbjct:   69 ERLRDREERDAFAERLRQRDEERTKHKRKAEEIEGRKGLTSDEIKQLAKRG--TLDAAQSERLN--QLRELSRQEYLKKREEKELELLEFQLRDEDVLF 163          
BLAST of mRNA_H-elongata_contig156444.3681.1 vs. uniprot
Match: A0A7S3ZYD7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZYD7_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.180e-10
Identity = 45/89 (50.56%), Postives = 61/89 (68.54%), Query Frame = 0
Query:    6 DLDERDALVERMMEKDETKTKRLELG-GLTPAQVSELATRGKVTSDAGGGDDLSTKELREMSRQMYLPKRAEKELKLLEAQLRDEEELF 93
            DL+ERDALV+RM E+DE +TKRLE   GL+  +++ELATRG V   A   D    K +R+ +RQ YL K   K+L LL+A++  EE+LF
Sbjct:  127 DLEERDALVQRMRERDELRTKRLEAEQGLSQQEIAELATRGTVDPLAREDD---VKLMRKFARQAYLDKWEAKQLDLLQAEVDQEEQLF 212          
BLAST of mRNA_H-elongata_contig156444.3681.1 vs. uniprot
Match: A0A7S3ZYK6_9STRA (Hypothetical protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZYK6_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.190e-10
Identity = 45/89 (50.56%), Postives = 61/89 (68.54%), Query Frame = 0
Query:    6 DLDERDALVERMMEKDETKTKRLELG-GLTPAQVSELATRGKVTSDAGGGDDLSTKELREMSRQMYLPKRAEKELKLLEAQLRDEEELF 93
            DL+ERDALV+RM E+DE +TKRLE   GL+  +++ELATRG V   A   D    K +R+ +RQ YL K   K+L LL+A++  EE+LF
Sbjct:  127 DLEERDALVQRMRERDELRTKRLEAEQGLSQQEIAELATRGTVDPLAREDD---VKLMRKFARQAYLDKWEAKQLDLLQAEVDQEEQLF 212          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig156444.3681.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5K0D3_9PHAE1.990e-3483.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHZ7_ECTSI8.240e-3381.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YTF2_9STRA2.480e-2670.21P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2STE0_9STRA2.300e-1856.99Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3H044_9STRA1.630e-1760.87Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S1XPJ3_9STRA1.850e-1345.45Hypothetical protein (Fragment) n=2 Tax=Phaeomonas... [more]
A0A662WSU0_9STRA2.060e-1249.04Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
D0NNB4_PHYIT6.360e-1149.49Pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
A0A7S3ZYD7_9STRA1.180e-1050.56Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S3ZYK6_9STRA1.190e-1050.56Hypothetical protein n=4 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 72..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig156444contigH-elongata_contig156444:270..1219 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig156444.3681.1mRNA_H-elongata_contig156444.3681.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig156444 252..1219 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig156444.3681.1 ID=prot_H-elongata_contig156444.3681.1|Name=mRNA_H-elongata_contig156444.3681.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=93bp
MERERDLDERDALVERMMEKDETKTKRLELGGLTPAQVSELATRGKVTSD
AGGGDDLSTKELREMSRQMYLPKRAEKELKLLEAQLRDEEELF
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