mRNA_H-elongata_contig15632.3672.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig15632.3672.1 vs. uniprot
Match: D7FR39_ECTSI (Mx1, Mx-like dynamin-related GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR39_ECTSI) HSP 1 Score: 316 bits (810), Expect = 4.170e-98 Identity = 167/208 (80.29%), Postives = 179/208 (86.06%), Query Frame = 1
Query: 1 MSTQVASTVDAGESIFQQIHDRDVRPWLDLVDELRGHGISQDIPLPQIAVMGDQSCGKSSVLEAISGIPFPRGSGLVTRCATQLIMKSSPKGSPWRAKASIPEQHQQR---SSRW--TGISKGGGAINNP-GPKTASSPEELTKVIEELQDALTGGDQGAFSTETISVQVQAPGLPDLTLIDLPGIVRTTTKGQRAGVMGEVNNLIQR 606
M+ + AS DAG+SIFQQIHDRDVRPWLDLVDELR HGISQD+PLPQIAVMGDQSCGKSSVLEAISGIPFPRGSGLVTRCATQLIMKSSPKGSPW+A ASIPEQ QQ+ SS W T S + + P GP++AS+PEELTKVIE+LQDALT GDQGAFST TISVQVQAPGLPDLTLIDLPGIVRT TKGQR VM EVN LIQR
Sbjct: 1 MAAEAASAGDAGDSIFQQIHDRDVRPWLDLVDELRAHGISQDLPLPQIAVMGDQSCGKSSVLEAISGIPFPRGSGLVTRCATQLIMKSSPKGSPWKASASIPEQQQQQHGASSLWRKTKSSTSKTSADFPKGPRSASTPEELTKVIEDLQDALTAGDQGAFSTATISVQVQAPGLPDLTLIDLPGIVRTATKGQRTSVMAEVNGLIQR 208
BLAST of mRNA_H-elongata_contig15632.3672.1 vs. uniprot
Match: A0A836CJ76_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ76_9STRA) HSP 1 Score: 227 bits (578), Expect = 6.590e-67 Identity = 119/187 (63.64%), Postives = 141/187 (75.40%), Query Frame = 1
Query: 46 FQQIHDRDVRPWLDLVDELRGHGISQDIPLPQIAVMGDQSCGKSSVLEAISGIPFPRGSGLVTRCATQLIMKSSPKGSPWRAKASIPEQHQQRSSRWTGISKGGGAINNPGPKTASSPEELTKVIEELQDALTGGDQGAFSTETISVQVQAPGLPDLTLIDLPGIVRTTTKGQRAGVMGEVNNLIQR 606
+ H ++VRPWLDLVDELRGHGISQDI LPQIAVMGDQS GKSSVLEAISG+PFPRG GLVTRCATQLIMKS+P+G+ W A+AS+ TG K + GP P LT+VI +LQ+ALT G+ AFS+E+I ++V+APGLPDLTLIDLPGIVRT T GQ AGVM EVN +++R
Sbjct: 9 LEHAHAKEVRPWLDLVDELRGHGISQDIALPQIAVMGDQSSGKSSVLEAISGVPFPRGGGLVTRCATQLIMKSAPEGAEWAARASV-----------TGPRKN---LKGCGP-VQGGPGALTRVIADLQNALTSGNASAFSSESIVIEVRAPGLPDLTLIDLPGIVRTATSGQSAGVMAEVNTMVER 180
BLAST of mRNA_H-elongata_contig15632.3672.1 vs. uniprot
Match: A0A7S3Y6A1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6A1_HETAK) HSP 1 Score: 203 bits (517), Expect = 2.210e-61 Identity = 100/187 (53.48%), Postives = 130/187 (69.52%), Query Frame = 1
Query: 43 IFQQIHDRDVRPWLDLVDELRGHGISQDIPLPQIAVMGDQSCGKSSVLEAISGIPFPRGSGLVTRCATQLIMKSSPKGSPWRAKASIPEQHQQRSSRWTGISKGGGAINNPGPKTASSPEELTKVIEELQDALTGGDQGAFSTETISVQVQAPGLPDLTLIDLPGIVRTTTKGQRAGVMGEVNNLIQ 603
+ ++I +RD+RPW+DL+DELR HGI D+PLPQIAVMGDQS GKSSVLEAISG+PFPRG+GL TRC QLI+K P G+ W KAS+ ++ + PG ++P ++ I L +A+T G AFSTETI+V+++AP +PDLTLIDLPGIVRT T GQ V+G+VN LI+
Sbjct: 13 LLKEIQERDIRPWMDLIDELRSHGIHHDVPLPQIAVMGDQSSGKSSVLEAISGVPFPRGAGLTTRCPVQLILKHLPDGAAWSGKASVAGRN----------------VQPPGAGPLANPHQVADAIVRLTEAVTEGAAAAFSTETITVEIRAPSVPDLTLIDLPGIVRTATAGQSIQVIGQVNALIE 183
BLAST of mRNA_H-elongata_contig15632.3672.1 vs. uniprot
Match: A0A6V1N3L6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N3L6_HETAK) HSP 1 Score: 203 bits (517), Expect = 6.980e-58 Identity = 100/187 (53.48%), Postives = 130/187 (69.52%), Query Frame = 1
Query: 43 IFQQIHDRDVRPWLDLVDELRGHGISQDIPLPQIAVMGDQSCGKSSVLEAISGIPFPRGSGLVTRCATQLIMKSSPKGSPWRAKASIPEQHQQRSSRWTGISKGGGAINNPGPKTASSPEELTKVIEELQDALTGGDQGAFSTETISVQVQAPGLPDLTLIDLPGIVRTTTKGQRAGVMGEVNNLIQ 603
+ ++I +RD+RPW+DL+DELR HGI D+PLPQIAVMGDQS GKSSVLEAISG+PFPRG+GL TRC QLI+K P G+ W KAS+ ++ + PG ++P ++ I L +A+T G AFSTETI+V+++AP +PDLTLIDLPGIVRT T GQ V+G+VN LI+
Sbjct: 13 LLKEIQERDIRPWMDLIDELRSHGIHHDVPLPQIAVMGDQSSGKSSVLEAISGVPFPRGAGLTTRCPVQLILKHLPDGAAWSGKASVAGRN----------------VQPPGAGPLANPHQVADAIVRLTEAVTEGAAAAFSTETITVEIRAPSVPDLTLIDLPGIVRTATAGQSIQVIGQVNALIE 183
BLAST of mRNA_H-elongata_contig15632.3672.1 vs. uniprot
Match: F0YCI2_AURAN (Dynamin-type G domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCI2_AURAN) HSP 1 Score: 182 bits (461), Expect = 1.010e-53 Identity = 99/190 (52.11%), Postives = 124/190 (65.26%), Query Frame = 1
Query: 37 ESIFQQIHDRDVRPWLDLVDELRGHGISQDIPLPQIAVMGDQSCGKSSVLEAISGIPFPRGSGLVTRCATQLIMKSSPKGSPWRAKASIPEQHQQRSSRWTGISKGGGAINNPGPKTAS-SPEELTKVIEELQDALTGGDQGAFSTETISVQVQAPGLPDLTLIDLPGIVRTTTKGQRAGVMGEVNNLIQ 603
ES + +D++VRP LDLVDELR GI QD+PLPQIAVMGDQS GKSSVLEA+SG+PFPRG+GLVTRC QL MK + G+P +GG PG + S +P ELT IE + ALT G FST++I V V AP +PDLT+IDLPGIVRT T+GQ V+ +VN++++
Sbjct: 3 ESALSKQNDKEVRPLLDLVDELRSLGIEQDLPLPQIAVMGDQSSGKSSVLEALSGVPFPRGTGLVTRCPCQLTMKRTADGAP----------------------RGGRVPRRPGNERPSRAPSELTAAIERVTSALTKGSASGFSTDSIVVTVNAPSVPDLTIIDLPGIVRTATQGQDPRVIADVNSMVE 170
BLAST of mRNA_H-elongata_contig15632.3672.1 vs. uniprot
Match: F0XVH2_AURAN (Dynamin-type G domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVH2_AURAN) HSP 1 Score: 181 bits (458), Expect = 1.260e-51 Identity = 99/183 (54.10%), Postives = 119/183 (65.03%), Query Frame = 1
Query: 52 QIHDRDVRPWLDLVDELRGHGISQDIPLPQIAVMGDQSCGKSSVLEAISGIPFPRGSGLVTRCATQLIMKSSPKGSPWRAKASIPEQHQQRSSRWTGISKGGGAINNPGPKTASSPEELTKVIEELQDALTGGDQGAFSTETISVQVQAPGLPDLTLIDLPGIVRTTTKGQRAGVMGEVNNLI 600
Q++D RP +DL+D LR HG+ +D+PLPQIAVMGDQS GKSSVLE ISG+PFPRGSGLVTRCATQLIMK + GS W A AS+ Q + GP + P L+ IE L +AL FSTETI + + AP +PDLTL+DLPGIVRT GQ A V+G+VN LI
Sbjct: 4 QLNDA-ARPLIDLIDTLRAHGVQRDLPLPQIAVMGDQSAGKSSVLEMISGVPFPRGSGLVTRCATQLIMKRTAPGSAWAATASVSWSRPQPA--------------ESGP--VADPAALSVAIERLTEALCAVTTNGFSTETIVINLSAPDVPDLTLLDLPGIVRTAVAGQNADVVGDVNGLI 169
BLAST of mRNA_H-elongata_contig15632.3672.1 vs. uniprot
Match: A0A7S2W2A1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2A1_9STRA) HSP 1 Score: 186 bits (472), Expect = 3.000e-51 Identity = 95/181 (52.49%), Postives = 121/181 (66.85%), Query Frame = 1
Query: 58 HDRDVRPWLDLVDELRGHGISQDIPLPQIAVMGDQSCGKSSVLEAISGIPFPRGSGLVTRCATQLIMKSSPKGSPWRAKASIPEQHQQRSSRWTGISKGGGAINNPGPKTASSPEELTKVIEELQDALTGGDQGAFSTETISVQVQAPGLPDLTLIDLPGIVRTTTKGQRAGVMGEVNNLI 600
H VRPWLDLVD LR G+ +D+ +PQIAVMGDQS GKSSVLEA+SG+ FPRG+GL TRC L+MK+SP G+ W+A AS+ Q GA+++ P+T PE LT+++ +L D LT GD FS + IS+ V +P +PDLTLIDLPGIVRT T GQ V+ +VN I
Sbjct: 14 HAESVRPWLDLVDNLRAQGVHEDLAIPQIAVMGDQSSGKSSVLEALSGVAFPRGTGLTTRCPIHLLMKTSPPGTAWQATASVVRQS--------------GAMSSLQPRTVHKPELLTELLVQLTDKLTTGDAQGFSQDAISLTVTSPDVPDLTLIDLPGIVRTATSGQDGAVLRQVNGTI 180
BLAST of mRNA_H-elongata_contig15632.3672.1 vs. uniprot
Match: D8LJA2_ECTSI (Mgm1 homolog, dynamin-related GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJA2_ECTSI) HSP 1 Score: 184 bits (468), Expect = 1.850e-50 Identity = 98/184 (53.26%), Postives = 120/184 (65.22%), Query Frame = 1
Query: 61 DRDVRPWLDLVDELRGHGISQDIPLPQIAVMGDQSCGKSSVLEAISGIPFPRGSGLVTRCATQLIMKSSPKGSPWRAKASIPEQHQQRSSRWTGISKGGGAINNPGPKTA---SSPEELTKVIEELQDALTGGDQGAFSTETISVQVQAPGLPDLTLIDLPGIVRTTTKGQRAGVMGEVNNLIQ 603
+R+VRPWLDLVD LR GI ++ LPQIAVMGDQSCGKSSVLEA+SG+ FPRGSGLVTRC QLIMK + G W K S+ W P P A +SPE L VIEEL +A+ G + FS++ I++++++P PDLTLIDLPGIVRT GQ GV+ EVN LI+
Sbjct: 35 EREVRPWLDLVDSLRAQGIQDELSLPQIAVMGDQSCGKSSVLEALSGVQFPRGSGLVTRCPVQLIMKRTKPGDGWHGKTSV---------EWK---------RGPQPPAAGHVASPEALVGVIEELMNAVCEGQKNGFSSDFIAIEIKSPDCPDLTLIDLPGIVRTAVSGQSQGVITEVNGLIE 200
BLAST of mRNA_H-elongata_contig15632.3672.1 vs. uniprot
Match: A0A6V2RT65_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2RT65_HETAK) HSP 1 Score: 178 bits (452), Expect = 1.090e-48 Identity = 90/180 (50.00%), Postives = 118/180 (65.56%), Query Frame = 1
Query: 61 DRDVRPWLDLVDELRGHGISQDIPLPQIAVMGDQSCGKSSVLEAISGIPFPRGSGLVTRCATQLIMKSSPKGSPWRAKASIPEQHQQRSSRWTGISKGGGAINNPGPKTASSPEELTKVIEELQDALTGGDQGAFSTETISVQVQAPGLPDLTLIDLPGIVRTTTKGQRAGVMGEVNNLI 600
D+DV+PWLDL+++LR + +++ +PQIAVMGDQS GKSSVLEA+S +PFPRGSGL TRC +L+M+++ KG W A+ S + Q P SSPEELT +IE + LT G FS E+I V++ AP P+LTLIDLPGI+RT T GQ A VMG++N LI
Sbjct: 19 DKDVKPWLDLMEDLRSLSMDKELSIPQIAVMGDQSSGKSSVLEALSNVPFPRGSGLTTRCPVRLVMRTALKGQSWAARVSTTKSTQP-------------------PVAVSSPEELTPLIERFTNTLTNGQSSEFSAESIVVEIAAPDAPNLTLIDLPGIIRTATAGQSAQVMGQINALI 179
BLAST of mRNA_H-elongata_contig15632.3672.1 vs. uniprot
Match: A0A836CBT5_9STRA (Mgm1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT5_9STRA) HSP 1 Score: 175 bits (443), Expect = 4.510e-47 Identity = 97/195 (49.74%), Postives = 121/195 (62.05%), Query Frame = 1
Query: 34 GESIFQQIH------DRDVRPWLDLVDELRGHGISQDIPLPQIAVMGDQSCGKSSVLEAISGIPFPRGSGLVTRCATQLIMKSSPKGSPWRAKASIPEQHQQRSSRWTGISKGGGAINNPGPKTASSPEELTKVIEELQDALTGGDQGAFSTETISVQVQAPGLPDLTLIDLPGIVRTTTKGQRAGVMGEVNNLI 600
GE+ QI+ +RDVRP+LDL+D LR HG+ ++ PLPQIAVMGDQS GKSSVLEA+SGI FPRGSGLVTRC QL+MK + G WRA A + + R+ P +SPE L VI +L A FST+++ V+V+AP PDLTL+DLPGIVRT GQ V+ EV+ LI
Sbjct: 13 GEAAGTQINKLDEAIERDVRPFLDLIDTLRSHGVQEETPLPQIAVMGDQSSGKSSVLEALSGISFPRGSGLVTRCPVQLVMKRARAGEAWRASARVAWSNSARA-------------QPPAAGAVASPEALADVIAQLMAAACDATANGFSTDSLVVEVRAPECPDLTLVDLPGIVRTAVAGQSDAVIPEVSALI 194 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15632.3672.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15632.3672.1 >prot_H-elongata_contig15632.3672.1 ID=prot_H-elongata_contig15632.3672.1|Name=mRNA_H-elongata_contig15632.3672.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=203bp MSTQVASTVDAGESIFQQIHDRDVRPWLDLVDELRGHGISQDIPLPQIAVback to top mRNA from alignment at H-elongata_contig15632:739..3927- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig15632.3672.1 ID=mRNA_H-elongata_contig15632.3672.1|Name=mRNA_H-elongata_contig15632.3672.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3189bp|location=Sequence derived from alignment at H-elongata_contig15632:739..3927- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig15632:739..3927- >mRNA_H-elongata_contig15632.3672.1 ID=mRNA_H-elongata_contig15632.3672.1|Name=mRNA_H-elongata_contig15632.3672.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1218bp|location=Sequence derived from alignment at H-elongata_contig15632:739..3927- (Himanthalia elongata Himel1 dioecious)back to top |