mRNA_H-elongata_contig15609.3662.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig15609.3662.1
Unique NamemRNA_H-elongata_contig15609.3662.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: D7FLF8_ECTSI (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF8_ECTSI)

HSP 1 Score: 655 bits (1691), Expect = 9.990e-231
Identity = 350/453 (77.26%), Postives = 378/453 (83.44%), Query Frame = 1
Query:    1 RTLFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLPEKDDDTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSGNDGSMLQLGNLDDHDPYKAALDEDQEEXXXXXXDGDYAPGAQEGSDAESSSESDVDGGDSDSATPKTSKRSGTGIKSKKEPKKRMKASESRSSKPGSKKRVKKDKNAPKGASSSYMQFSQAKRAEV 1359
            +TLFDLN+K++SQCVMPGVKKSNDVELQLHESDATDQ EDTLVAIRVTLPEKD+DT+E SPAE+LQM VMERANIHDVKGKVLVEFNESQGTFDFPRGRYS+EMYS FMRMHG+RYDYKIQYNDISKLFLLEKPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEATI VNMS+EDLQ+KY+ NLNSEM GPLHNLIAKIFKVL++KPVYVTGKFSS NGAKAVKCALGANEG+LYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGET KPYVFSGIDR+EY+SLYSFLSTKKLRIKNIK+SGND +MLQLG+LDDHDPYKAALD+DQ E     X                           D A   + KR GTG   K   +K                  KKDK+APKGA S++MQFSQA RA+V
Sbjct:  119 KTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEATITVNMSAEDLQKKYDSNLNSEMIGPLHNLIAKIFKVLSNKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKESGNDNAMLQLGDLDDHDPYKAALDDDQGEDEESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRAHKTSKKRPGTGSAKKGPTQKXXXXXXXXXXXXXXXXXAKKDKDAPKGAMSAFMQFSQANRAQV 571          
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A6H5L083_9PHAE (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L083_9PHAE)

HSP 1 Score: 597 bits (1538), Expect = 4.210e-210
Identity = 338/497 (68.01%), Postives = 370/497 (74.45%), Query Frame = 1
Query:    1 RTLFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLPEKDDDTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAK----IFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSGNDGSMLQLGNLDDHDPYKAALDEDQEEXXXXXXDGDYAPGAQEGSDAESSSESDVDGG------------------------DSDSATPKTSKRS-GTGIKSKKEPKKRM---------------KASESRSSKPGSKKRVKKDKNAPKGASSSYMQFSQAKRAEV 1359
            RTLFDLN+K++SQCVMPGVKKSNDVELQLHESDATDQ EDTLVAIRVTLPEKD+DT+E SPAE+LQM VMERANIHDVKGKVLVEFNESQGTFDFPRGRYS+EMYS FMRMHG+RYDYKIQYNDISKLFLLEKPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEA I VNMS+EDLQ+KY+ NLNSEM GPLHNL+AK    IFKVL+ KPVYVTGKFSS NGAKAVKCALGANEG+LYPLNK                             GAGVTRNFDLCVAPKSVAGET KPYVFSGIDR+EY+SLYSFLSTKKLRIKNIK+ GND +MLQLG+LDDHDPYKAALD+D+ E      D DYAP A+ GSDA                                   DSD    KTSK+  GTG   K   +K++               +AS   SSKP  KKR KKDK+APKGA S++MQFSQA RA+ 
Sbjct:    3 RTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEAAITVNMSAEDLQKKYDSNLNSEMIGPLHNLVAKVPKLIFKVLSSKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNK-----------------------------GAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKERGNDNAMLQLGDLDDHDPYKAALDDDEGEDEESEDDADYAPDARGGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDSDDGAHKTSKKKPGTGSAKKGATQKKVGCSPEPSSLNPCFPQRASGGHSSKPTPKKRTKKDKDAPKGAMSAFMQFSQANRAQA 470          
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A836C825_9STRA (FACT complex subunit SSRP1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C825_9STRA)

HSP 1 Score: 362 bits (928), Expect = 7.910e-116
Identity = 187/307 (60.91%), Postives = 228/307 (74.27%), Query Frame = 1
Query:  118 DTLVAIRVTLPEKDDDTE--------------EPSP---AETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAG-VTRNFDLCVAPKSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSGN 984
            D LV +R+ LP++ +D +              +  P   AET    VM+RANI DVKG VL E + S GTF  PRGRY++EMYS F+RMHG++YDYKIQY DI+KLFLLEKPD+RYVAFV+SLDKP+RQGQQ+YQHLVL+ +K E T+ +NMS  +LQ+KY G L   M G L NLIAKIFK L+ + V+VTG + S  GAK VKCA+GA+EGHLYPLNKSFIFIHKPT +IGFDE+ESVEFQRY G Q    V R+FDLCV  +S++GE +K Y FSGIDR+EY SLY +  TK LRIKNIK SG+
Sbjct:  102 DCLVEMRLYLPDESEDDDGMEVDEDGEAIRKKDKKPRFTAETFHQAVMDRANIRDVKGSVLCELDSSLGTFLTPRGRYALEMYSTFLRMHGSKYDYKIQYEDINKLFLLEKPDDRYVAFVISLDKPVRQGQQRYQHLVLQASKVEETLNLNMSEAELQEKYKGALEPVMRGALCNLIAKIFKSLSGRAVFVTGNYRSAAGAKCVKCAMGASEGHLYPLNKSFIFIHKPTRVIGFDEVESVEFQRYSGTQDPSTVRRSFDLCVTLRSISGEPSKDYTFSGIDRSEYPSLYQWCQTKNLRIKNIKSSGD 408          
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A7S2SJ65_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SJ65_9STRA)

HSP 1 Score: 358 bits (920), Expect = 3.350e-115
Identity = 179/331 (54.08%), Postives = 241/331 (72.81%), Query Frame = 1
Query:    7 LFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLPEKDD----DTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSGND 987
            +  + + E+SQCV+PG  + N++ELQ HESD  +   D LVAIR  +P   +    D + P+ AE     +M+ A I +  G V+VEF+E++GTF  PRGRY IE+Y  F+RM G +YDYKI+Y+DI++LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ LVL+TTK+ + + VN+  ++L+++Y G L   M G L NLIAK FK++A K V++ GKF +      VKCAL ANEGHLYPL KSF+FIHKP  +I FDE++SVEFQRY G QG+  TRNFDLCV   S AG+  K Y+FSGIDR++YTSLY+FLS KK++IKNI++S  D
Sbjct:  151 MMSMKLAEVSQCVLPGNNR-NEIELQFHESDTVEAGTDQLVAIRFYIPPDPEMDPSDRDAPTSAEVFHQRIMKNAKIKNTAGDVIVEFDENKGTFLTPRGRYLIELYDSFLRMRGNKYDYKIKYDDIARLFLLPKPDDTHMAFVIALDKPIRQGQQRYQMLVLQTTKENSEVTVNLDEKELEEEYKGELQPVMQGALCNLIAKTFKIIAKKKVFIPGKFVNAYQQSCVKCALKANEGHLYPLEKSFVFIHKPPVLIRFDEVDSVEFQRYAGGQGS--TRNFDLCVMLASSAGDPQKEYIFSGIDRSDYTSLYNFLSGKKIKIKNIQESKID 478          
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A7R9VM85_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VM85_9STRA)

HSP 1 Score: 347 bits (890), Expect = 3.510e-114
Identity = 174/310 (56.13%), Postives = 230/310 (74.19%), Query Frame = 1
Query:   67 NDVELQLHESDATDQMEDTLVAIRVTLPEKDD----DTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAP-KSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSG 981
            N++E+Q HESDA +   D LVA+R  +P   D    + + P+PAE  Q  +M+ ANI    G V+VE  E +GTF  PRGRY+IE+Y  F+RM G +YDYKI+Y+DIS+LFLL KPDE ++AFV++LDKPIRQGQQ+YQ+LV++TTKD A + VN+  E L+++YNG+L   M G L NL+AK FK++A K V++ GKF++ N    VKCAL A+EGHLYPL K FIFIHKPT ++ FD++ESVEFQRY G QG+  TRNFDLCV+   S A   TK Y+FSGIDR++YT LY+FLS KK++IKN++  G
Sbjct:    4 NEIEMQFHESDAVEAGTDQLVAVRFYIPPDPDADPSEQDAPTPAELFQQRIMKNANIKRTTGDVIVEIPEEKGTFLTPRGRYAIELYDTFLRMRGAKYDYKIKYDDISRLFLLPKPDEVHMAFVIALDKPIRQGQQRYQNLVMQTTKDHAELTVNLDEEVLEKEYNGDLQPVMYGALSNLVAKTFKIIAKKKVFIPGKFANANQQPCVKCALRASEGHLYPLEKQFIFIHKPTVLVRFDDVESVEFQRYAGGQGS--TRNFDLCVSLLNSGADAGTKEYIFSGIDRSDYTGLYNFLSGKKIKIKNLQGGG 311          
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A7S4HR37_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HR37_9STRA)

HSP 1 Score: 364 bits (935), Expect = 1.070e-113
Identity = 181/326 (55.52%), Postives = 243/326 (74.54%), Query Frame = 1
Query:    7 LFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLPEKDD----DTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETTKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIK 972
            +   N+KEISQCV+PG  + N++E+Q HESDA +   D LVAIR  +P   D    + +  +PAE  Q  +M+ ANI    G V+VE  E++GTF  PRGRY+IE+Y  F+RM G +YDYKI+Y+DIS+LFLL KPDE ++AFV++LDKPIRQGQQ+YQ+LV++TTKD A + VN+  E L+++YNG+L   M G L NL+AK FK++A K V++ GKF++ N    VKCAL A+EGHLYPL K FIFIHKPT ++ FD++ESVEFQRY G QG+  TRNFDLCV+  +    +TK Y+FSGIDR++YT LY+FLS KK++IKN++
Sbjct:  153 MMSANLKEISQCVLPGNNR-NEIEMQFHESDAVEAGTDQLVAIRFYIPPDPDADPSELDASTPAELFQQRIMKNANIKRTTGDVIVEIPEAKGTFLTPRGRYAIELYDTFLRMRGAKYDYKIKYDDISRLFLLPKPDEVHMAFVIALDKPIRQGQQRYQNLVMQTTKDHAELTVNLDEEVLEKEYNGDLQPVMYGALSNLVAKTFKIIAKKKVFIPGKFANANQQPCVKCALRASEGHLYPLEKQFIFIHKPTVLVRFDDVESVEFQRYAGGQGS--TRNFDLCVSLINSGDSSTKEYIFSGIDRSDYTGLYNFLSGKKIKIKNLQ 475          
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A6U3RIK7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RIK7_9STRA)

HSP 1 Score: 364 bits (935), Expect = 1.560e-113
Identity = 182/330 (55.15%), Postives = 243/330 (73.64%), Query Frame = 1
Query:    7 LFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLPEKDD----DTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGET-TKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSG 981
            +  L + E+SQCV+PG  + N++ELQ HESD  +   D LV +R+ +P   D    D +  +PAE LQ  +M+ ANI +  G V+VEF+ES+GTF  PRGRY+IE+Y  F+RM G +YDYKI+Y+DISKLFLL KPD+ ++AFV++LDKPIRQGQQ+YQ LV++TTK+++ + VN+  E LQ +Y G+L   M G L NL+AK FKV+A K V++ GKF++ N    VKCAL ANEGHLYPL K F+FIHKP  ++ FDE+ESVEFQRY G QG+  TRNFDLCV   + +G+T +K YVFSGIDR++YT LY+FLS KK++I N +  G
Sbjct:  161 MMSLQLAEVSQCVLPGNNR-NEIELQFHESDTVEAGTDQLVGVRIYIPPDPDMDPQDNDVQTPAEILQQRIMKMANIKNTTGSVIVEFDESRGTFLTPRGRYTIELYDSFLRMRGNKYDYKIKYDDISKLFLLPKPDDVHMAFVIALDKPIRQGQQRYQMLVMQTTKEQSEVSVNLDEETLQSEYGGDLQPMMYGALSNLVAKTFKVIAKKKVFIPGKFANANQQACVKCALRANEGHLYPLEKQFVFIHKPPVLVRFDEVESVEFQRYAGGQGS--TRNFDLCVTLLNTSGDTGSKEYVFSGIDRSDYTGLYNFLSGKKIKINNFQGVG 487          
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A7S1C2J2_9STRA (FACT complex subunit SSRP1 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C2J2_9STRA)

HSP 1 Score: 342 bits (876), Expect = 2.250e-107
Identity = 179/356 (50.28%), Postives = 247/356 (69.38%), Query Frame = 1
Query:    7 LFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLPEKDD----DTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGET--TKPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQSGNDGSML--QLGNLDDHDPYKAALDE 1050
            +  L++ E+SQCV+PG  + ND+ELQ HESDA +   D LV +R  +P   D    D + P+ AE  Q  +M +A I +    V+V+F+E++G+F  PRGRY++E+Y  ++RMHG +YDYKI Y DIS+LFLL + +E+  AFV++LDKPIRQGQQ+YQ+LVL+TT  ++ + +N+  E L ++YNG+L  ++ G L NL+AK FKV+  K V+V GKF++  G   VKCAL ANEG LYPL K F+FIHKP+ ++ FDEIESVEFQRY G QG+  TRNFDLCV   ++ GE+  +K YVFSGIDR +Y +LYSFLS KK+RI NI  +G +      +    DD+D    A D+
Sbjct:  147 ILSLDLTEVSQCVLPGNNR-NDIELQFHESDAGEVGTDQLVQLRFYVPPDPDADQADRDVPTAAELFQKSIMTQARIKNSSMNVIVQFDENRGSFLTPRGRYAMELYDSYLRMHGNKYDYKINYADISRLFLLPRQEEQNKAFVIALDKPIRQGQQRYQYLVLQTTTAQSEVTINLDQETLDREYNGDLQPQVRGSLCNLVAKCFKVITRKKVFVPGKFTNAYGQSFVKCALRANEGSLYPLEKQFVFIHKPSVLVRFDEIESVEFQRYAGGQGS--TRNFDLCVRLLNITGESGGSKEYVFSGIDRTDYNTLYSFLSGKKIRIANIADNGMESGQASARAAMYDDNDTRNDAGDD 499          
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A1E7FQX7_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQX7_9STRA)

HSP 1 Score: 341 bits (875), Expect = 4.770e-107
Identity = 180/330 (54.55%), Postives = 239/330 (72.42%), Query Frame = 1
Query:    7 LFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLP-----EKDDDTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETT--KPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQ 975
            +  L++ E+SQCV+PG  + N+VELQ  ESDA +   D LV++R+ +P     +  D T + S AE LQ  +M+ ANI    G V+VEF+  +G+F  PRGRYSIE+Y RF RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD   + VN+  + L+++Y  +L   M G L NL+AK FKV+A K V++ GKFS+ N    VKCAL ANEG LYPL K FIFIHKP  +I F+E+ESVEFQRY G QG+  TRNFDLCV  K+ A   +  + YVFSGIDR++YT LY+FLSTK +RIKN+++
Sbjct:  100 MMSLDLGEVSQCVLPGNNR-NEVELQFPESDAIEANNDQLVSVRLYIPPDPEVDPSDKTAKTS-AELLQHRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEVRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFIFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVTLKASAASISNQQEYVFSGIDRSDYTGLYNFLSTKSIRIKNLQE 425          
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Match: A0A7S0TAB4_9STRA (FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0TAB4_9STRA)

HSP 1 Score: 343 bits (880), Expect = 8.920e-107
Identity = 179/329 (54.41%), Postives = 237/329 (72.04%), Query Frame = 1
Query:    7 LFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLPEKDD----DTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIAKIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETT--KPYVFSGIDRAEYTSLYSFLSTKKLRIKNIKQ 975
            +  L++ E+SQCV+PG  + N+VELQ  ESDA +   D LV+IR  +P   +    D    S AE LQ  +M+ ANI    G V+VEF+  +G+F  PRGRYSIE+Y RF RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD   I VN+  + L+++Y  +L   M G L NL+AK FKV+A K V++ GKFS+ N    VKCAL ANEG LYPL K F+FIHKP  +I F+E+ESVEFQRY G QG+  TRNFDLCV+ K+ A   +  + YVFSG+DR++YT LY+FLSTK +RIKN+++
Sbjct:  155 MMSLDLAEVSQCVLPGNNR-NEVELQFPESDAIEANNDQLVSIRFYIPPDPEVDPSDRTVKSSAELLQQRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEIRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFVFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVSLKASAASVSNQQEYVFSGVDRSDYTGLYNFLSTKNIRIKNLQE 480          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15609.3662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF8_ECTSI9.990e-23177.26FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sili... [more]
A0A6H5L083_9PHAE4.210e-21068.01FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. ... [more]
A0A836C825_9STRA7.910e-11660.91FACT complex subunit SSRP1 n=1 Tax=Tribonema minus... [more]
A0A7S2SJ65_9STRA3.350e-11554.08FACT complex subunit SSRP1 (Fragment) n=1 Tax=Euca... [more]
A0A7R9VM85_9STRA3.510e-11456.13FACT complex subunit SSRP1 (Fragment) n=1 Tax=Pseu... [more]
A0A7S4HR37_9STRA1.070e-11355.52Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A6U3RIK7_9STRA1.560e-11355.15Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1C2J2_9STRA2.250e-10750.28FACT complex subunit SSRP1 n=1 Tax=Corethron hystr... [more]
A0A1E7FQX7_9STRA4.770e-10754.55FACT complex subunit SSRP1 (Fragment) n=1 Tax=Frag... [more]
A0A7S0TAB4_9STRA8.920e-10754.41FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15609contigH-elongata_contig15609:177..5153 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score662.5
Seed ortholog evalue1.4e-187
Seed eggNOG ortholog2880.D7FLF8
Preferred namePOB3
KEGG koko:K09272
GOsGO:0000003,GO:0000228,GO:0000741,GO:0000785,GO:0000790,GO:0000791,GO:0001672,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005719,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006338,GO:0006342,GO:0006355,GO:0006357,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0006997,GO:0007154,GO:0007275,GO:0008023,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009267,GO:0009553,GO:0009559,GO:0009561,GO:0009605,GO:0009607,GO:0009791,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010197,GO:0010228,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016043,GO:0016458,GO:0019219,GO:0019222,GO:0022414,GO:0022607,GO:0030154,GO:0030447,GO:0030466,GO:0030702,GO:0031298,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031334,GO:0031497,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033554,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034724,GO:0034728,GO:0035101,GO:0036170,GO:0036180,GO:0040007,GO:0040029,GO:0042393,GO:0042594,GO:0042802,GO:0042803,GO:0043044,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043486,GO:0043596,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044182,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0045814,GO:0045892,GO:0045893,GO:0045898,GO:0045899,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046983,GO:0048229,GO:0048284,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048608,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051641,GO:0051716,GO:0060255,GO:0060260,GO:0060261,GO:0061458,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070727,GO:0071103,GO:0071496,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0140110,GO:1901360,GO:1901363,GO:1901576,GO:1902275,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990141,GO:2000112,GO:2000113,GO:2000142,GO:2000144,GO:2001141
EggNOG free text desc.DNA replication
EggNOG OGsCOG5165@1,KOG0526@2759
COG Functional cat.BKL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHigh mobility group domain protein
Ec32 orthologEc-12_008000.1
Exons10
Model size1362
Cds size1362
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15609.3662.1prot_H-elongata_contig15609.3662.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig15609 177..5153 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929920.1075044-CDS-H-elongata_contig15609:176..3081622929920.1075044-CDS-H-elongata_contig15609:176..308Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15609 177..308 -
1691679208.7804086-CDS-H-elongata_contig15609:176..3081691679208.7804086-CDS-H-elongata_contig15609:176..308Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15609 177..308 -
1622929920.1252441-CDS-H-elongata_contig15609:536..7101622929920.1252441-CDS-H-elongata_contig15609:536..710Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15609 537..710 -
1691679208.7961185-CDS-H-elongata_contig15609:536..7101691679208.7961185-CDS-H-elongata_contig15609:536..710Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15609 537..710 -
1622929920.144906-CDS-H-elongata_contig15609:869..11121622929920.144906-CDS-H-elongata_contig15609:869..1112Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15609 870..1112 -
1691679208.8035624-CDS-H-elongata_contig15609:869..11121691679208.8035624-CDS-H-elongata_contig15609:869..1112Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15609 870..1112 -
1622929920.1587818-CDS-H-elongata_contig15609:1332..14191622929920.1587818-CDS-H-elongata_contig15609:1332..1419Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15609 1333..1419 -
1691679208.810886-CDS-H-elongata_contig15609:1332..14191691679208.810886-CDS-H-elongata_contig15609:1332..1419Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15609 1333..1419 -
1622929920.1736336-CDS-H-elongata_contig15609:1544..16671622929920.1736336-CDS-H-elongata_contig15609:1544..1667Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15609 1545..1667 -
1691679208.8185613-CDS-H-elongata_contig15609:1544..16671691679208.8185613-CDS-H-elongata_contig15609:1544..1667Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15609 1545..1667 -
1622929920.1932027-CDS-H-elongata_contig15609:1962..20701622929920.1932027-CDS-H-elongata_contig15609:1962..2070Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15609 1963..2070 -
1691679208.8312953-CDS-H-elongata_contig15609:1962..20701691679208.8312953-CDS-H-elongata_contig15609:1962..2070Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15609 1963..2070 -
1622929920.2049832-CDS-H-elongata_contig15609:2339..24901622929920.2049832-CDS-H-elongata_contig15609:2339..2490Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15609 2340..2490 -
1691679208.847784-CDS-H-elongata_contig15609:2339..24901691679208.847784-CDS-H-elongata_contig15609:2339..2490Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15609 2340..2490 -
1622929920.3836923-CDS-H-elongata_contig15609:2725..28651622929920.3836923-CDS-H-elongata_contig15609:2725..2865Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15609 2726..2865 -
1691679208.8565335-CDS-H-elongata_contig15609:2725..28651691679208.8565335-CDS-H-elongata_contig15609:2725..2865Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15609 2726..2865 -
1622929920.4020312-CDS-H-elongata_contig15609:4816..49031622929920.4020312-CDS-H-elongata_contig15609:4816..4903Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15609 4817..4903 -
1691679208.8650417-CDS-H-elongata_contig15609:4816..49031691679208.8650417-CDS-H-elongata_contig15609:4816..4903Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15609 4817..4903 -
1622929920.4169986-CDS-H-elongata_contig15609:5036..51531622929920.4169986-CDS-H-elongata_contig15609:5036..5153Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15609 5037..5153 -
1691679208.8753424-CDS-H-elongata_contig15609:5036..51531691679208.8753424-CDS-H-elongata_contig15609:5036..5153Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15609 5037..5153 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig15609.3662.1

>prot_H-elongata_contig15609.3662.1 ID=prot_H-elongata_contig15609.3662.1|Name=mRNA_H-elongata_contig15609.3662.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=454bp
RTLFDLNVKEISQCVMPGVKKSNDVELQLHESDATDQMEDTLVAIRVTLP
EKDDDTEEPSPAETLQMLVMERANIHDVKGKVLVEFNESQGTFDFPRGRY
SIEMYSRFMRMHGTRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIR
QGQQKYQHLVLRTTKDEATILVNMSSEDLQQKYNGNLNSEMTGPLHNLIA
KIFKVLADKPVYVTGKFSSNNGAKAVKCALGANEGHLYPLNKSFIFIHKP
TCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETTKPYVFSG
IDRAEYTSLYSFLSTKKLRIKNIKQSGNDGSMLQLGNLDDHDPYKAALDE
DQEEDEESEDDGDYAPGAQEGSDAESSSESDVDGGDSDSATPKTSKRSGT
GIKSKKEPKKRMKASESRSSKPGSKKRVKKDKNAPKGASSSYMQFSQAKR
AEV*
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mRNA from alignment at H-elongata_contig15609:177..5153-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig15609.3662.1 ID=mRNA_H-elongata_contig15609.3662.1|Name=mRNA_H-elongata_contig15609.3662.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4977bp|location=Sequence derived from alignment at H-elongata_contig15609:177..5153- (Himanthalia elongata Himel1 dioecious)
AGGACGCTGTTCGATCTGAACGTAAAAGAAATAAGCCAATGTGTCATGCC GGGTGTCAAGAAAAGTAACGACGTGGAGTTACAACTGCATGAGAGCGATG CCACAGACCAAATGGAGGTTAGTACTCCTGAAGAACCTATTTCTACCATT TAATAACCTTGGTATATCATCCTCTTCCCTCTTCTCTAGCTTTGTTCTAC TGTACAAGTTGCGAACCAACTCTCTGTGCCCGGCCCGTTGTGCACCGCAG GACACGCTCGTTGCAATACGTGTGACGTTGCCAGAAAAGGATGACGACAC GGAAGAACCCTCGCCTGCAGAAACCCTCCAAATGCTGGTGAGTTTTTTGT CATGCGCCGAAATGACTTTTCACATGACCAGTGCCGGAACCGGTTTTCCG TTCGGTACTGTGAGATATTCTCAAAACAGGTACTGGTTCGGCACTGTGTG ATTTTTGCCGGCACTGGTTCGGCAGTGTGAATTTTTTCGTCTCCAAAACC GGTACTGGTTCGGCACTGTGAGGTTTTTGCTCGGTACTGGTTCGGCACTG TGATTTATTTATTTTTTAAACCGGTACTGTGTCGGCACTGTGTGGTTTTT GTCTGGCACTGGTTGGGTACTGTGAGCATTCTCTGGAAATAATGTGAGCA GCCCTGAAATGTTTCGTTATTTGTTATTTGTATTTCTGATTTCGGCTGGG GAGCAATTATTGCGCTACGTGTGGTTCAGAAGGATACTTGGTTTTGGCGG AAAATAAAAGAGACCCAAGAACCGCTTTCCCACCACAAAATATATAATAC CGAAACCCGCTTGTTCTGCTCTCTTTTTTTTTGTCTGCAATATGTTAAAC CTATATATTCAGAAACATTTTTTGGTATTTAGGTACGTTTCCCGAGACCA AATTCTCAGGCGCGAACGGGTCAGGGGGGAAATATTTTCGCTGTTCAGCT GACCACGAGCCGAAGGCAATCAAATACAGTTGATATTCTGCTAAATGTTT CACCAGCAACAACACCAGGGTTCGCGGAGAGCAAATGCTTTGGCCTCTTG GTGCCGTGCTACGACACGAACCGCCCCCCCCTCAAAACACGTTGTTCTCG TGATTGCTTTTTTATGAACGACGAAATACTGGGTGGAATAGCGCATGCTT TTTGTTTCTGAGCAGGAGCTGCGTGCTCTTCGAATCCCTCGCATGTTGTT GGTGCTTACCATAATAGGAGAGGTAACAGATTGGTTGAATCGTAAACTAT ATATACTCGAATTTTGTTTACTATTTGTATCCCTGCATGATACGTGTACA TTGAACGCTTCGCGAACGGGGACGGGAAAATATTTTCCCCTGTTCAGCTG ACCACGAGCAGAAGGCGACCAAATTCGGTTGAAATGTGTGACAAACAACA GCCCCTAATAATGTAGCTGTTAGTAACACCAACATTTACATCATTATTAT TGTTACCATTGTTTATGCGTATCCCTGCTTATCCCTGTTGTCCCTGCTCA TTCCTTATTGTTACTATTGTTATGCTTACCCCTGCTTATTCCTATTGTCC CTGCTCATTCCTTCTTTCTGGTGCAAGAAGGTGTGGATGTTCGGAGAGTT AGAATGAGCTTAAAGTCTTTTAAATAAAAACAATTCATATAATGATTACA GCAGTGAGGTGCAAATGCCGAAGTTCGTGGTTTCTGCCATTCAAGCATAT GCCCTTCACATCTCTATGAAATCCCACATGTCCACCCACATCACAGTGCC CGTGCCGGGTTCATATTCGGCGCTGAAAGAGCTCATTTTTCTCGCATGCC CAAAATAATCACACACATGTCTGCTTCACAGTGGTGCCGGTTTTGAGGTC GGCACTGTGAGATTTTTCGTCTCCAAAACCGGTACTGGTTTGGCACTGTG AAATTTTTGCCGGCACTGGTTCGGCACTGTGATTTTTTTAATCTACACAT CCGGTACTGGTTTGGCACTGTGAGATTTTTAATCTACAAAACCGGTACTG GTTCGGCACTGTGAGATTTTTGCCGGCACTGGTACAGCACTGTGTGTTTT TTTAATCTACAAAACCGGTAAAATCGGTACTGGTTCGGCACTGGGAGGCT TTTGCTCGGCACTGTGATATTTTTGTTTCTCAAAACCGGCACTGTGTCGG CAATGTGTGGTTTTTGTCCGGCACTGGTTCGGCACTGTGAGCATTCTCTG GTCACGTGAGCATTGTTCCTTTTGAGGGTGATAAAATCCCTTCAATGGAC GCCCACTTCGCCTTATATCCGTGAAATGCATAACTCAGGTAATGGAGCGT GCTAACATCCACGACGTCAAGGGCAAGGTGCTCGTCGAGTTCAACGAAAG TCAGGGTACCTTCGACTTTCCAAGAGGACGCTATTCCATCGAGATGTACA GTAGGTTCATGCGTATGCATGGGACAAGGTAAGAAATCTCGCGGTATGAT GCTTTGTTCCTAGAGACAACCGTGGTTTTGTTAATCCTCTATTGTTTAAA AAGTCGGTGCTTTAGTGGAAACTTGAATCAAGTTCGCTTGGCCAAATTTC GTTCTTCCGCTGCAACGGCATGCTGTTCACCTACTTCTGAATTATTTTTG CTCTAGATTTGACTCCAAAATAACTTCTCATGTTTTGCTGGGGACATCTT CTACTTTTCCCAGGTACGACTACAAGATTCAGTACAATGACATCTCCAAA CTCTTCCTCCTTGAAAAGCCGGACGAACGATACGTGGCGTTTGTGGTATC TTTAGACAAACCAATCCGACAGGGGCAGCAAAAATACCAACACTTGGTGT TGCGTACGACTAAGGTGTGTGAAGTCATTATATGTAGCAGAGGAAGGATC AACCGGATTTTCTTGTCTCTGAGACATCGTAAAATACTTAATACGCAACT TTACAGACACGCCATTCACCATGCCGAAACGTACATTTTTGGTGCTACAG CTACAGCTACGGGCTAGGGGCGGGCAAGCACTTGTTGTTCAGGAATGTTT GTGGTCACCCTGACTCGGTTCTAATATGCGCACCCATCGCCAACACAGTT AAGTGACGTTTCATTTTACTGCTATTTGGACAGGATGAGGCCACTATTTT GGTGAACATGAGCTCTGAAGACCTTCAACAGAAGTACAATGGCAATCTCA ATTCAGAGATGACCGGGCCGCTTCACAATCTCATAGCCAAGGTAGGCATG AATGAAGACGTTTACGATTCGGGTGGTAGTTATGACATTGTAGTATGACG AGCTTGTGTTGTGAAACGTCACCATGTCGAAACTGGCCGGTATTGGTGGC ATAACGTTGGCTGGAAAATACATGCTTCCTTTGAATAGCCCTTCTGCTTT AATACGGATGCGGTTCCGGCAAGAGTAAAGCTGGCCGCGTAGGAATCAGT CAACGGTAATCCGTCGAATGCGAAATACTCTGTATTCGCCTTCCTGACAA AATTTTGCCAATGTGAGTTTCGAATTCCAACACTAGATCTTCAAGGTGCT CGCGGACAAGCCAGTGTACGTGACCGGAAAATTCAGCAGCAACAACGGCG CAAAGGCTGTCAAGTGTGCGCTGGGCGCGAACGAGGGACACTTGTATCCG CTCAACAAGGTAAGCATACGCGAAAGGCAATGGTAAAATATCGAATGGAT GACTTTCGCACTCGGTCATGATCTGTTTTTCCAGCCACGATCTAATATGT TTTGTCTCATCACCGACGTCCCATTTCTCCGCAGTCATTCATTTTCATTC ACAAGCCAACCTGCATCATCGGCTTTGATGAGATTGAGTCCGTGGAGTTT CAGCGATACGGAGGAGCTCAGGTGCGTGTGCTGGTAATAGTTTTTAGATG TGCACATTGCCTGCTGTCCAAACTGTATTGACGTAAAGACCTGTCTGGTG TATAGATCGGAAGCAGGTTACTCGCAGTGGTACAAATTCCCAAAACACTT TATGCGCGATCACCGTGACTGCCTCACGCTGATTATTATACAAAACACTT GTCTAAAAATGTAAACTTTTACTCTGCTTTGACCGATGCAGGGAGCAGGC GTGACTCGAAACTTCGATCTGTGTGTAGCTCCGAAATCGGTGGCAGGGGA GACCACGAAGCCGTACGTATTTAGTGGCATCGATCGCGCAGAGTACACAT CGTTGTACTCGTTCTTGAGCACCAAGAAGCTGCGCATCAAAAACATAAAG CAAAGTGGGAATGATGGAAGCATGTTGCAGCTGGGAAATCTCGATGACCA CGATCCGTACAAGGCTGCTCTAGATGAGGATCAGGTGATTCAATTGGCAA ATGTGCGATCAGTTCACAAGGCTAACAAACACACATGGCTGTAGTGATGT GCTTTAAATTTCCGGAACCTACTGATCGTTCTCGTTTTCACTTCATGTGT CCGTCGTAGTCTGACAAGCGATTGTTGTTGATCTATTCGTTAGGAGGAAG ATGAAGAAAGCGAAGACGATGGAGACTACGCACCGGGTGCGCAAGAGGGT TCGGATGCAGAATCAAGCTCCGAATCGGATGTAGACGGAGGTGACAGCGA TAGTGCTACACCCAAAACTTCAAAGAGGTCCGGCACTGGCATCAAAAGCA AAAAAGAGCCGAAAAAGGTCAGTGACTTTCGAGTTCGGATATACATGCTC AGGTTTATGAGCCTATCGCGCTCAGAAATTAGCTGCGGCTCTCAAACACT CACTGTTTTACGCCTGACTGGCCTTGCAGTAATTCTCTTGGTGACAATGA ACACGAAACATTAATATATCACCCTTCCAAGCGTTTGTCTAAATTCTGAT GACCATTTTTCCTGGCCGTGGTGGATAAATGATGCCTCCAAGAAGCGTAT GAAAGCTTCGGAGAGCAGATCGTCGAAGCCAGGCTCCAAGAAGCGAGTGA AGAAAGACAAGAATGCTCCAAAAGGAGCAAGTTCGTCTTACATGCAGTTT TCGCAGGCGAAGCGTGCTGAGGTGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig15609:177..5153-

>mRNA_H-elongata_contig15609.3662.1 ID=mRNA_H-elongata_contig15609.3662.1|Name=mRNA_H-elongata_contig15609.3662.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2724bp|location=Sequence derived from alignment at H-elongata_contig15609:177..5153- (Himanthalia elongata Himel1 dioecious)
AGGACGCTGTTCGATCTGAACGTAAAAGAAATAAGCCAATGTGTCATGCC
GGGTGTCAAGAAAAGTAACGACGTGGAGTTACAACTGCATGAGAGCGATG
CCACAGACCAAATGGAGAGGACGCTGTTCGATCTGAACGTAAAAGAAATA
AGCCAATGTGTCATGCCGGGTGTCAAGAAAAGTAACGACGTGGAGTTACA
ACTGCATGAGAGCGATGCCACAGACCAAATGGAGGACACGCTCGTTGCAA
TACGTGTGACGTTGCCAGAAAAGGATGACGACACGGAAGAACCCTCGCCT
GCAGAAACCCTCCAAATGCTGGACACGCTCGTTGCAATACGTGTGACGTT
GCCAGAAAAGGATGACGACACGGAAGAACCCTCGCCTGCAGAAACCCTCC
AAATGCTGGTAATGGAGCGTGCTAACATCCACGACGTCAAGGGCAAGGTG
CTCGTCGAGTTCAACGAAAGTCAGGGTACCTTCGACTTTCCAAGAGGACG
CTATTCCATCGAGATGTACAGTAGGTTCATGCGTATGCATGGGACAAGGT
AATGGAGCGTGCTAACATCCACGACGTCAAGGGCAAGGTGCTCGTCGAGT
TCAACGAAAGTCAGGGTACCTTCGACTTTCCAAGAGGACGCTATTCCATC
GAGATGTACAGTAGGTTCATGCGTATGCATGGGACAAGGTACGACTACAA
GATTCAGTACAATGACATCTCCAAACTCTTCCTCCTTGAAAAGCCGGACG
AACGATACGTGGCGTTTGTGGTATCTTTAGACAAACCAATCCGACAGGGG
CAGCAAAAATACCAACACTTGGTGTTGCGTACGACTAAGGTACGACTACA
AGATTCAGTACAATGACATCTCCAAACTCTTCCTCCTTGAAAAGCCGGAC
GAACGATACGTGGCGTTTGTGGTATCTTTAGACAAACCAATCCGACAGGG
GCAGCAAAAATACCAACACTTGGTGTTGCGTACGACTAAGGATGAGGCCA
CTATTTTGGTGAACATGAGCTCTGAAGACCTTCAACAGAAGTACAATGGC
AATCTCAATTCAGAGATGACCGGGCCGCTTCACAATCTCATAGCCAAGGA
TGAGGCCACTATTTTGGTGAACATGAGCTCTGAAGACCTTCAACAGAAGT
ACAATGGCAATCTCAATTCAGAGATGACCGGGCCGCTTCACAATCTCATA
GCCAAGATCTTCAAGGTGCTCGCGGACAAGCCAGTGTACGTGACCGGAAA
ATTCAGCAGCAACAACGGCGCAAAGGCTGTCAAGTGTGCGCTGGGCGCGA
ACGAGGGACACTTGTATCCGCTCAACAAGATCTTCAAGGTGCTCGCGGAC
AAGCCAGTGTACGTGACCGGAAAATTCAGCAGCAACAACGGCGCAAAGGC
TGTCAAGTGTGCGCTGGGCGCGAACGAGGGACACTTGTATCCGCTCAACA
AGTCATTCATTTTCATTCACAAGCCAACCTGCATCATCGGCTTTGATGAG
ATTGAGTCCGTGGAGTTTCAGCGATACGGAGGAGCTCAGTCATTCATTTT
CATTCACAAGCCAACCTGCATCATCGGCTTTGATGAGATTGAGTCCGTGG
AGTTTCAGCGATACGGAGGAGCTCAGGGAGCAGGCGTGACTCGAAACTTC
GATCTGTGTGTAGCTCCGAAATCGGTGGCAGGGGAGACCACGAAGCCGTA
CGTATTTAGTGGCATCGATCGCGCAGAGTACACATCGTTGTACTCGTTCT
TGAGCACCAAGAAGCTGCGCATCAAAAACATAAAGCAAAGTGGGAATGAT
GGAAGCATGTTGCAGCTGGGAAATCTCGATGACCACGATCCGTACAAGGC
TGCTCTAGATGAGGATCAGGGAGCAGGCGTGACTCGAAACTTCGATCTGT
GTGTAGCTCCGAAATCGGTGGCAGGGGAGACCACGAAGCCGTACGTATTT
AGTGGCATCGATCGCGCAGAGTACACATCGTTGTACTCGTTCTTGAGCAC
CAAGAAGCTGCGCATCAAAAACATAAAGCAAAGTGGGAATGATGGAAGCA
TGTTGCAGCTGGGAAATCTCGATGACCACGATCCGTACAAGGCTGCTCTA
GATGAGGATCAGGAGGAAGATGAAGAAAGCGAAGACGATGGAGACTACGC
ACCGGGTGCGCAAGAGGGTTCGGATGCAGAATCAAGCTCCGAATCGGATG
TAGACGGAGGTGACAGCGATAGTGCTACACCCAAAACTTCAAAGAGGTCC
GGCACTGGCATCAAAAGCAAAAAAGAGCCGAAAAAGGAGGAAGATGAAGA
AAGCGAAGACGATGGAGACTACGCACCGGGTGCGCAAGAGGGTTCGGATG
CAGAATCAAGCTCCGAATCGGATGTAGACGGAGGTGACAGCGATAGTGCT
ACACCCAAAACTTCAAAGAGGTCCGGCACTGGCATCAAAAGCAAAAAAGA
GCCGAAAAAGCGTATGAAAGCTTCGGAGAGCAGATCGTCGAAGCCAGGCT
CCAAGAAGCGAGTGAAGAAAGACAAGAATGCTCCAAAAGGAGCAAGTTCG
TCTTACATGCAGTTTTCGCAGGCGAAGCGTGCTGAGGTGTGACGTATGAA
AGCTTCGGAGAGCAGATCGTCGAAGCCAGGCTCCAAGAAGCGAGTGAAGA
AAGACAAGAATGCTCCAAAAGGAGCAAGTTCGTCTTACATGCAGTTTTCG
CAGGCGAAGCGTGCTGAGGTGTGA
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