prot_H-elongata_contig155801.3649.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig155801.3649.1
Unique Nameprot_H-elongata_contig155801.3649.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length115
Homology
BLAST of mRNA_H-elongata_contig155801.3649.1 vs. uniprot
Match: A0A6H5JAW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAW0_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 3.820e-46
Identity = 82/113 (72.57%), Postives = 92/113 (81.42%), Query Frame = 0
Query:    4 MSNPDGFILQACPPPALDQSTMKRGVLVKLGLGWFGGVITRRSHPLSRQKYDS--ILHD-DESPRSMKLPLASYSTDEDAAVGAWVLLEVDQKKGVRRRQRATTPSVRLRDLA 113
            M  PDGF LQA PPP LDQS +KRGVLVKLGL WFGGVI+RRSHP SRQ+YD   ILH  DES RSMK+PL S STDEDAA+GAWVLLEV+ K+G  RR+R TTP+VRL +LA
Sbjct:    1 MDIPDGFRLQASPPPTLDQSIVKRGVLVKLGLYWFGGVISRRSHPASRQEYDYRVILHCCDESTRSMKMPLESCSTDEDAAIGAWVLLEVNPKEGSGRRKRVTTPTVRLTELA 113          
BLAST of mRNA_H-elongata_contig155801.3649.1 vs. uniprot
Match: A0A6H5LD01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD01_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 3.650e-44
Identity = 79/112 (70.54%), Postives = 89/112 (79.46%), Query Frame = 0
Query:    4 MSNPDGFILQACPPPALDQSTMKRGVLVKLGLGWFGGVITRRSHPLSRQK--YDSILHDDESPRSMKLPLASYSTDEDAAVGAWVLLEVDQKKGVRRRQRATTPSVRLRDLA 113
            M  PD F LQA PPPAL+QS +KRG LV+LGLGWFGGVI+RRSHP SRQ+  Y  ILH  ES RSMK+PL SYSTDEDAA+GAWVLLEVD K+   RR+R TTP+VRL  LA
Sbjct:    1 MDIPDRFRLQASPPPALNQSIVKRGSLVQLGLGWFGGVISRRSHPGSRQENDYRVILHCTESTRSMKMPLESYSTDEDAAIGAWVLLEVDPKERSGRRRRVTTPNVRLTGLA 112          
BLAST of mRNA_H-elongata_contig155801.3649.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 1.190e-35
Identity = 69/95 (72.63%), Postives = 79/95 (83.16%), Query Frame = 0
Query:    2 LKMSNPDGFILQACPPPALDQSTMKRGVLVKLGLGWFGGVITRRSHPLSRQKYDS--ILHDDESPRSMKLPLASYSTDEDAAVGAWVLLEVDQKK 94
            L+M  PDGF LQA PP ALDQS +KRGVLVKLGLGWFGGVI+RR+HP SR +YD   +LH D S RSMKLPL SYSTDEDA VG+WVLLEV+Q++
Sbjct: 1878 LEMDIPDGFQLQASPPSALDQSLVKRGVLVKLGLGWFGGVISRRAHPASRDEYDYRVVLHSDGSTRSMKLPLESYSTDEDAGVGSWVLLEVEQEE 1972          
BLAST of mRNA_H-elongata_contig155801.3649.1 vs. uniprot
Match: A0A6H5K5A6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A6_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 5.760e-26
Identity = 61/108 (56.48%), Postives = 68/108 (62.96%), Query Frame = 0
Query:    2 LKMSNPDGFILQACPPPALDQSTMKRGVLVKLGLGWFGGVITRRSHPLSRQKYDSILHDDESPRSMKLPLASYSTDEDAAVGAWVLLEVDQKKGVRRRQRATTPSVRL 109
            LKM  PDGF LQA PPPALDQS +KRGVLVKLGLGWFGG                          MK+PL SY+TDEDAA+GAWVLLEVD K+G+ RR+R      RL
Sbjct:  352 LKMDIPDGFRLQASPPPALDQSIVKRGVLVKLGLGWFGG--------------------------MKMPLDSYNTDEDAAIGAWVLLEVDPKEGIGRRKRGIPSMGRL 433          
BLAST of mRNA_H-elongata_contig155801.3649.1 vs. uniprot
Match: A0A6H5JUW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUW4_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 2.240e-25
Identity = 52/88 (59.09%), Postives = 62/88 (70.45%), Query Frame = 0
Query:    4 MSNPDGFILQACPPPALDQSTMKRGVLVKLGLGWFGGVITRRSHPLSRQKYDSILHDD--ESPRSMKLPLASYSTDEDAAVGAWVLLE 89
            M  PD F +QAC P ALD S ++RGVLV LG+GWFGGVITR+S   +R  YD  +H D  +S RSMKLPL  Y  D DA VG+W+LLE
Sbjct:   10 MEIPDRFRIQACTPAALDISLLQRGVLVGLGMGWFGGVITRQSQERTRHLYDYHMHLDLDQSTRSMKLPLEMYREDPDAVVGSWILLE 97          
BLAST of mRNA_H-elongata_contig155801.3649.1 vs. uniprot
Match: A0A6H5K105_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K105_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 9.810e-24
Identity = 52/75 (69.33%), Postives = 59/75 (78.67%), Query Frame = 0
Query:   43 TRRSHPLSRQKYDS--ILHDDESPR--SMKLPLASYSTDEDAAVGAWVLLEVDQKKGVRRRQRATTPSVRLRDLA 113
            T  SHP SRQ+YD   ILH DES R  SMK+PL SYSTDED A+GAWVLLEVD K+G RRR+R TTP+VRL +LA
Sbjct:   18 TSSSHPASRQEYDYRVILHCDESTRKFSMKMPLESYSTDEDVAIGAWVLLEVDPKEGSRRRKRVTTPNVRLTELA 92          
BLAST of mRNA_H-elongata_contig155801.3649.1 vs. uniprot
Match: A0A6H5KY33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY33_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 1.320e-23
Identity = 47/60 (78.33%), Postives = 51/60 (85.00%), Query Frame = 0
Query:    2 LKMSNPDGFILQACPPPALDQSTMKRGVLVKLGLGWFGGVITRRSHPLSRQKYDS--ILH 59
            LKM  PDGF LQA PPPALDQS +KRGVLVKLGLGWFGGV++RRSHP SRQ+YD   ILH
Sbjct:   33 LKMDIPDGFRLQASPPPALDQSIVKRGVLVKLGLGWFGGVLSRRSHPASRQEYDYRVILH 92          
BLAST of mRNA_H-elongata_contig155801.3649.1 vs. uniprot
Match: A0A6H5JXN2_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN2_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.830e-22
Identity = 51/88 (57.95%), Postives = 62/88 (70.45%), Query Frame = 0
Query:    4 MSNPDGFILQACPPPALDQSTMKRGVLVKLGLGWFGGVITRRSHPLSRQKYDSILHDD--ESPRSMKLPLASYSTDEDAAVGAWVLLE 89
            M  PDGF +QA  P ALD S ++RG+LV+LG+GWFGGVITR+S   +R  YD  +H D   S RSMKLPL  Y  D DA VG+W+LLE
Sbjct:  552 MEIPDGFRIQASTPAALDNSLLQRGLLVRLGMGWFGGVITRQSQERTRHLYDYRVHLDLDRSTRSMKLPLEMYKGDPDAVVGSWILLE 639          
BLAST of mRNA_H-elongata_contig155801.3649.1 vs. uniprot
Match: A0A6H5KHD5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHD5_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 2.480e-22
Identity = 55/108 (50.93%), Postives = 67/108 (62.04%), Query Frame = 0
Query:    4 MSNPDGFILQACPPPALDQSTMKRGVLVKLGLGWFGGVITRRSHPLSRQKYDSILHDDESPRSMKLPLASYSTDEDAAVGAWVLLEVDQKKGVRRRQRATTPSVRLRD 111
            M  P GF LQ   P ALD+S ++ GVLV+LG+GWFGG+I ++S       Y   L  D S R+MKLPL +YS D DAAVG+WVLLE      V R  R  TP+V L D
Sbjct:   30 MEIPAGFRLQESTPAALDRSLLQLGVLVRLGMGWFGGLIIQQSPQRHLYDYCVQLEVDHSTRNMKLPLDTYSGDPDAAVGSWVLLE-----SVSRAGRVRTPNVTLVD 132          
BLAST of mRNA_H-elongata_contig155801.3649.1 vs. uniprot
Match: A0A6H5L5J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J8_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 2.690e-22
Identity = 49/87 (56.32%), Postives = 61/87 (70.11%), Query Frame = 0
Query:    4 MSNPDGFILQACPPPALDQSTMKRGVLVKLGLGWFGGVITRRSHPLSRQKYDSILHDD--ESPRSMKLPLASYSTDEDAAVGAWVLL 88
            M  PDGF +QAC P A+D S ++RGVLV+LG+GWFGGVITR+S   +R  YD  +H D  +S  SMKLPL  Y    DA VG+W+LL
Sbjct:  267 MEIPDGFCIQACTPAAIDSSLLQRGVLVRLGMGWFGGVITRKSQERTRHLYDYRVHLDLDQSTSSMKLPLEMYRGVPDAVVGSWILL 353          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig155801.3649.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAW0_9PHAE3.820e-4672.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LD01_9PHAE3.650e-4470.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH58_9PHAE1.190e-3572.63Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K5A6_9PHAE5.760e-2656.48DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JUW4_9PHAE2.240e-2559.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K105_9PHAE9.810e-2469.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY33_9PHAE1.320e-2378.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXN2_9PHAE1.830e-2257.95C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KHD5_9PHAE2.480e-2250.93Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5J8_9PHAE2.690e-2256.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig155801contigH-elongata_contig155801:554..898 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig155801.3649.1mRNA_H-elongata_contig155801.3649.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig155801 542..898 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig155801.3649.1 ID=prot_H-elongata_contig155801.3649.1|Name=mRNA_H-elongata_contig155801.3649.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=115bp
MLKMSNPDGFILQACPPPALDQSTMKRGVLVKLGLGWFGGVITRRSHPLS
RQKYDSILHDDESPRSMKLPLASYSTDEDAAVGAWVLLEVDQKKGVRRRQ
RATTPSVRLRDLAP*
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