prot_H-elongata_contig155517.3639.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig155517.3639.1
Unique Nameprot_H-elongata_contig155517.3639.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length100
Homology
BLAST of mRNA_H-elongata_contig155517.3639.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 2.540e-19
Identity = 48/75 (64.00%), Postives = 57/75 (76.00%), Query Frame = 0
Query:    1 MFYAVFETLSPFADSLDMWLYRFGALIIYLSMYLALLLKVDVADEESHSQTVFAWLLIAAHCGMALVVIIYALFS 75
            +F AV + LSPFAD  D WLYR GA II+ SMYLALLLKVD +DE+S SQ  FA +LIAAH GM LVV++ A+ S
Sbjct:  988 IFMAVSDVLSPFADPFDGWLYRTGAWIIFFSMYLALLLKVDASDEDSQSQAAFAKVLIAAHVGMVLVVLVQAVLS 1062          
BLAST of mRNA_H-elongata_contig155517.3639.1 vs. uniprot
Match: A0A6H5KHA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA3_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 6.510e-19
Identity = 44/72 (61.11%), Postives = 55/72 (76.39%), Query Frame = 0
Query:    5 VFETLSPFADSLDMWLYRFGALIIYLSMYLALLLKVDVADEESHSQTVFAWLLIAAHCGMALVVIIYALFSA 76
            VFE L+PF D +D WLYR GAL+++ SMYLALLLKVD +DE S SQ VFA +L+AAH  M L V++ +L SA
Sbjct:  291 VFEVLAPFVDPMDAWLYRSGALVVFFSMYLALLLKVDASDENSESQQVFAAVLVAAHVSMVLAVLLSSLLSA 362          
BLAST of mRNA_H-elongata_contig155517.3639.1 vs. uniprot
Match: D7FPF7_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF7_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 2.140e-17
Identity = 42/74 (56.76%), Postives = 55/74 (74.32%), Query Frame = 0
Query:    2 FYAVFETLSPFADSLDMWLYRFGALIIYLSMYLALLLKVDVADEESHSQTVFAWLLIAAHCGMALVVIIYALFS 75
            F  + + LSPFAD LD WLYR GA +I++SM+L LLLKVD +DE+S SQ +FA LLI+AH GM L + + A+ S
Sbjct:  313 FIGISDVLSPFADPLDAWLYRSGAWVIFISMFLTLLLKVDASDEDSQSQELFAKLLISAHVGMVLAIAVQAVLS 386          
BLAST of mRNA_H-elongata_contig155517.3639.1 vs. uniprot
Match: D7FUB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB5_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 6.910e-17
Identity = 43/72 (59.72%), Postives = 54/72 (75.00%), Query Frame = 0
Query:    5 VFETLSPFADSLDMWLYRFGALIIYLSMYLALLLKVDVADEESHSQTVFAWLLIAAHCGMALVVIIYALFSA 76
            VFE L+PF D +D  LYR GAL+++ SMYLALLLKVD +DE S SQ VFA +L+AAH  M L V++ +L SA
Sbjct:  269 VFEVLAPFVDPVDAGLYRSGALVVFYSMYLALLLKVDASDESSESQQVFAAVLVAAHVSMVLAVLLRSLLSA 340          
BLAST of mRNA_H-elongata_contig155517.3639.1 vs. uniprot
Match: A0A6H5L4E3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4E3_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 2.220e-16
Identity = 42/75 (56.00%), Postives = 52/75 (69.33%), Query Frame = 0
Query:    1 MFYAVFETLSPFADSLDMWLYRFGALIIYLSMYLALLLKVDVADEESHSQTVFAWLLIAAHCGMALVVIIYALFS 75
            +F AV + L PF D    WLYR G  II+ SMYLALLLKVDV+DE++ SQ  FA +LIAAH GM  V++  A+ S
Sbjct:  141 IFMAVSDVLPPFVDPFGAWLYRIGGWIIFFSMYLALLLKVDVSDEDNQSQAAFAKVLIAAHAGMVAVIVGQAVLS 215          
BLAST of mRNA_H-elongata_contig155517.3639.1 vs. uniprot
Match: A0A6H5L0E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0E1_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 7.330e-15
Identity = 39/73 (53.42%), Postives = 53/73 (72.60%), Query Frame = 0
Query:    1 MFYAVFETLSPFADSLDMWLYRFGALIIYLSMYLALLLKVDVADEESHSQTVFAWLLIAAHCGMALVVIIYAL 73
            +F  V E LSPFA  ++MWLYR G  +++ SMYLALLL+VDV+DE + SQ VF+ +L+ AH  M LVV++  L
Sbjct:  199 VFMVVSEFLSPFARPIEMWLYRTGHYVVFASMYLALLLRVDVSDENNQSQEVFSGVLVIAHAAMLLVVVLQGL 271          
BLAST of mRNA_H-elongata_contig155517.3639.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 1.020e-14
Identity = 39/73 (53.42%), Postives = 53/73 (72.60%), Query Frame = 0
Query:    1 MFYAVFETLSPFADSLDMWLYRFGALIIYLSMYLALLLKVDVADEESHSQTVFAWLLIAAHCGMALVVIIYAL 73
            +F  V E LSPFA  ++MWLYR G  +++ SMYLALLL+VDV+DE + SQ VF+ +L+ AH  M LVV++  L
Sbjct:  954 VFMVVSEFLSPFARPVEMWLYRTGHYVVFASMYLALLLRVDVSDERNQSQEVFSGVLVIAHAAMLLVVVLQGL 1026          
BLAST of mRNA_H-elongata_contig155517.3639.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 2.590e-14
Identity = 38/73 (52.05%), Postives = 52/73 (71.23%), Query Frame = 0
Query:    1 MFYAVFETLSPFADSLDMWLYRFGALIIYLSMYLALLLKVDVADEESHSQTVFAWLLIAAHCGMALVVIIYAL 73
            +F  V E LSPFA  ++MWLYR G  +++ SMYLALLL+VDV+DE   SQ VF+ +++ AH  M LVV++  L
Sbjct:  941 VFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVMAHVAMFLVVVVQGL 1013          
BLAST of mRNA_H-elongata_contig155517.3639.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 9.010e-14
Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    1 MFYAVFETLSPFADSLDMWLYRFGALIIYLSMYLALLLKVDVADEESHSQTVFAWLLIAAHCGMALVVI 69
            +F  V E LSPFA  ++MWLYR G  +++ SMYLALLL+VDV+DE   SQ VF+ +++ AH  M LVV+
Sbjct:  960 VFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVIAHVAMFLVVV 1028          
BLAST of mRNA_H-elongata_contig155517.3639.1 vs. uniprot
Match: D7FTU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU0_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 1.240e-13
Identity = 38/69 (55.07%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    1 MFYAVFETLSPFADSLDMWLYRFGALIIYLSMYLALLLKVDVADEESHSQTVFAWLLIAAHCGMALVVI 69
            +F  V E LSPFA  ++MWLYR G  +++ SMYLALLL+VDV+DE   SQ VFA +++ AH  M LVV+
Sbjct:   89 VFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDEGDQSQGVFAVVVVVAHACMVLVVL 157          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig155517.3639.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWI3_9PHAE2.540e-1964.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHA3_9PHAE6.510e-1961.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPF7_ECTSI2.140e-1756.76Probable extracellular nuclease (ISS) n=1 Tax=Ecto... [more]
D7FUB5_ECTSI6.910e-1759.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4E3_9PHAE2.220e-1656.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L0E1_9PHAE7.330e-1553.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTU5_ECTSI1.020e-1453.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L324_9PHAE2.590e-1452.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTT9_ECTSI9.010e-1453.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTU0_ECTSI1.240e-1355.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 75..99
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 41..51
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..40
NoneNo IPR availableTMHMMTMhelixcoord: 52..74
NoneNo IPR availableTMHMMTMhelixcoord: 20..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig155517contigH-elongata_contig155517:1031..1330 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig155517.3639.1mRNA_H-elongata_contig155517.3639.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig155517 941..1440 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig155517.3639.1 ID=prot_H-elongata_contig155517.3639.1|Name=mRNA_H-elongata_contig155517.3639.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=100bp
MFYAVFETLSPFADSLDMWLYRFGALIIYLSMYLALLLKVDVADEESHSQ
TVFAWLLIAAHCGMALVVIIYALFSAFPRVRSFKISCGKLLACRHGCCC*
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