prot_H-elongata_contig155491.3637.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig155491.3637.1
Unique Nameprot_H-elongata_contig155491.3637.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length92
Homology
BLAST of mRNA_H-elongata_contig155491.3637.1 vs. uniprot
Match: F0XW64_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW64_AURAN)

HSP 1 Score: 124 bits (311), Expect = 3.940e-32
Identity = 53/83 (63.86%), Postives = 63/83 (75.90%), Query Frame = 0
Query:    4 FIHSQSRGGPCSNPGTVRIWDWEYYREERALTGHGWDVKTVEWHPYKSLIVSGSKDNLVKMWDPRTGNSLSTLYGHKNTVMKV 86
            F  S ++   C++ GTVRIWDWE ++EER L GHGWDVKT  WHP   LI SGSKDN VKMWDPR  + ++TLYGHK+TVMKV
Sbjct:  121 FAPSDAKFCSCADDGTVRIWDWELFQEERILAGHGWDVKTCAWHPSYQLIASGSKDNQVKMWDPRKRSCVATLYGHKHTVMKV 203          
BLAST of mRNA_H-elongata_contig155491.3637.1 vs. uniprot
Match: G4T5A0_SERID (Polyadenylation factor subunit 2 n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4T5A0_SERID)

HSP 1 Score: 114 bits (284), Expect = 2.500e-28
Identity = 47/85 (55.29%), Postives = 62/85 (72.94%), Query Frame = 0
Query:    3 SFIHSQSRGGPCSNPGTVRIWDWEYYREERALTGHGWDVKTVEWHPYKSLIVSGSKDNLVKMWDPRTGNSLSTLYGHKNTVMKVS 87
            SF  + +R   CS+  T++IW +   REER LTGHGWDV+ V+WHP K L+ SGSKDNL+K WDPRTG  L+TL+ HKNT+  ++
Sbjct:   32 SFSPNDARFVTCSDDSTLKIWAFNESREERTLTGHGWDVRCVQWHPSKGLLASGSKDNLIKFWDPRTGTCLTTLHQHKNTIQALA 116          
BLAST of mRNA_H-elongata_contig155491.3637.1 vs. uniprot
Match: V4BJZ7_LOTGI (Uncharacterized protein (Fragment) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4BJZ7_LOTGI)

HSP 1 Score: 114 bits (285), Expect = 5.340e-28
Identity = 53/84 (63.10%), Postives = 63/84 (75.00%), Query Frame = 0
Query:    3 SFIHSQSRGGPCSNPGTVRIWDWEYYREERALTGHGWDVKTVEWHPYKSLIVSGSKDNL--VKMWDPRTGNSLSTLYGHKNTVM 84
            SF  S S+   CS+ GTVRIWD+    EER L GHG DVK V+WHP K+LI SGSKDN   +K+WDPRTGNSL+T++ HKNTVM
Sbjct:  169 SFCPSDSKFTTCSDDGTVRIWDFVRCHEERILRGHGADVKCVDWHPQKTLIASGSKDNQQPLKLWDPRTGNSLATIHAHKNTVM 252          
BLAST of mRNA_H-elongata_contig155491.3637.1 vs. uniprot
Match: UPI00097DA884 (pre-mRNA 3' end processing protein WDR33-like n=1 Tax=Paralichthys olivaceus TaxID=8255 RepID=UPI00097DA884)

HSP 1 Score: 110 bits (275), Expect = 1.020e-27
Identity = 50/88 (56.82%), Postives = 64/88 (72.73%), Query Frame = 0
Query:    1 IHSFIHSQSRGGPCSNPGTVRIWDWEYYREERALTGHGWDVKTVEWHPYKSLIVSGSKDNL--VKMWDPRTGNSLSTLYGHKNTVMKV 86
            + SF  + ++   CS+ GTVRIWD+    EER L GHG DVK V+WHP K L+VSGSKD+   +K WDP+TG SL+TL+ HKNTVM+V
Sbjct:   23 LSSFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEV 110          
BLAST of mRNA_H-elongata_contig155491.3637.1 vs. uniprot
Match: A0A0N0U3Y7_9HYME (Pre-mRNA 3' end processing protein WDR33 n=21 Tax=Apocrita TaxID=7400 RepID=A0A0N0U3Y7_9HYME)

HSP 1 Score: 114 bits (285), Expect = 1.450e-27
Identity = 52/88 (59.09%), Postives = 64/88 (72.73%), Query Frame = 0
Query:    1 IHSFIHSQSRGGPCSNPGTVRIWDWEYYREERALTGHGWDVKTVEWHPYKSLIVSGSKDNL--VKMWDPRTGNSLSTLYGHKNTVMKV 86
            +HSF  +  +   CS+ GTVRIWD+    EER L GHG DVK V WHP KSL++SGSKDN   VK+WDP+TG SL+TL+ HK+TVM V
Sbjct:  302 VHSFSPTDHKLATCSDDGTVRIWDFLRCHEERILRGHGADVKCVHWHPQKSLVISGSKDNQQPVKLWDPKTGQSLATLHAHKSTVMDV 389          
BLAST of mRNA_H-elongata_contig155491.3637.1 vs. uniprot
Match: A0A836FTB2_9HYME (WDR33 protein (Fragment) n=12 Tax=Attini TaxID=143999 RepID=A0A836FTB2_9HYME)

HSP 1 Score: 114 bits (285), Expect = 1.450e-27
Identity = 52/88 (59.09%), Postives = 64/88 (72.73%), Query Frame = 0
Query:    1 IHSFIHSQSRGGPCSNPGTVRIWDWEYYREERALTGHGWDVKTVEWHPYKSLIVSGSKDNL--VKMWDPRTGNSLSTLYGHKNTVMKV 86
            +HSF  +  +   CS+ GTVRIWD+    EER L GHG DVK V WHP KSL++SGSKDN   VK+WDP+TG SL+TL+ HK+TVM V
Sbjct:  301 VHSFSPTDHKLATCSDDGTVRIWDFLRCHEERILRGHGADVKCVHWHPQKSLVISGSKDNQQPVKLWDPKTGQSLATLHAHKSTVMDV 388          
BLAST of mRNA_H-elongata_contig155491.3637.1 vs. uniprot
Match: E9IXY7_SOLIN (Uncharacterized protein (Fragment) n=9 Tax=Formicidae TaxID=36668 RepID=E9IXY7_SOLIN)

HSP 1 Score: 114 bits (285), Expect = 1.450e-27
Identity = 52/88 (59.09%), Postives = 64/88 (72.73%), Query Frame = 0
Query:    1 IHSFIHSQSRGGPCSNPGTVRIWDWEYYREERALTGHGWDVKTVEWHPYKSLIVSGSKDNL--VKMWDPRTGNSLSTLYGHKNTVMKV 86
            +HSF  +  +   CS+ GTVRIWD+    EER L GHG DVK V WHP KSL++SGSKDN   VK+WDP+TG SL+TL+ HK+TVM V
Sbjct:  306 VHSFSPTDHKLATCSDDGTVRIWDFLRCHEERILRGHGADVKCVHWHPQKSLVISGSKDNQQPVKLWDPKTGQSLATLHAHKSTVMDV 393          
BLAST of mRNA_H-elongata_contig155491.3637.1 vs. uniprot
Match: E2AQ06_CAMFO (WD repeat-containing protein 33 n=2 Tax=Camponotus floridanus TaxID=104421 RepID=E2AQ06_CAMFO)

HSP 1 Score: 114 bits (284), Expect = 1.980e-27
Identity = 51/88 (57.95%), Postives = 64/88 (72.73%), Query Frame = 0
Query:    1 IHSFIHSQSRGGPCSNPGTVRIWDWEYYREERALTGHGWDVKTVEWHPYKSLIVSGSKDNL--VKMWDPRTGNSLSTLYGHKNTVMKV 86
            +HSF  +  +   CS+ GTVR+WD+    EER L GHG DVK V WHP KSL++SGSKDN   VK+WDP+TG SL+TL+ HK+TVM V
Sbjct:  303 VHSFSPTDHKLATCSDDGTVRVWDFLRCHEERILRGHGADVKCVHWHPQKSLVISGSKDNQQPVKLWDPKTGQSLATLHAHKSTVMDV 390          
BLAST of mRNA_H-elongata_contig155491.3637.1 vs. uniprot
Match: A0A8H8SNN8_9AGAM (Polyadenylation factor subunit 2 n=2 Tax=Ceratobasidium sp. AG-Ba TaxID=170446 RepID=A0A8H8SNN8_9AGAM)

HSP 1 Score: 113 bits (283), Expect = 2.010e-27
Identity = 47/77 (61.04%), Postives = 57/77 (74.03%), Query Frame = 0
Query:    3 SFIHSQSRGGPCSNPGTVRIWDWEYYREERALTGHGWDVKTVEWHPYKSLIVSGSKDNLVKMWDPRTGNSLSTLYGH 79
            SF    SR   C +  +VR+W +E  REER +TGHGWDVK +EWHP + L+VSGSKDNLVK WDPRTG +LSTL+ H
Sbjct:  214 SFAPGDSRFASCGDDASVRVWAFEEMREERCITGHGWDVKCIEWHPTRGLLVSGSKDNLVKFWDPRTGQNLSTLHQH 290          
BLAST of mRNA_H-elongata_contig155491.3637.1 vs. uniprot
Match: A0A2D4P7A4_MICSU (Uncharacterized protein (Fragment) n=1 Tax=Micrurus surinamensis TaxID=129470 RepID=A0A2D4P7A4_MICSU)

HSP 1 Score: 108 bits (270), Expect = 4.150e-27
Identity = 49/79 (62.03%), Postives = 60/79 (75.95%), Query Frame = 0
Query:   14 CSNPGTVRIWDWEYYREERALTGHGWDVKTVEWHPYKSLIVSGSKDNL--VKMWDPRTGNSLSTLYGHKNTVMKVSLGV 90
            CS+ GTVRIWD+    EER L GHG DVK V+WHP K L+VSGSKD+   +K WDP+TG SL+TL+ HKNTVM+V L +
Sbjct:    1 CSDDGTVRIWDFLRCHEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNL 79          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig155491.3637.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F0XW64_AURAN3.940e-3263.86Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
G4T5A0_SERID2.500e-2855.29Polyadenylation factor subunit 2 n=1 Tax=Serendipi... [more]
V4BJZ7_LOTGI5.340e-2863.10Uncharacterized protein (Fragment) n=1 Tax=Lottia ... [more]
UPI00097DA8841.020e-2756.82pre-mRNA 3' end processing protein WDR33-like n=1 ... [more]
A0A0N0U3Y7_9HYME1.450e-2759.09Pre-mRNA 3' end processing protein WDR33 n=21 Tax=... [more]
A0A836FTB2_9HYME1.450e-2759.09WDR33 protein (Fragment) n=12 Tax=Attini TaxID=143... [more]
E9IXY7_SOLIN1.450e-2759.09Uncharacterized protein (Fragment) n=9 Tax=Formici... [more]
E2AQ06_CAMFO1.980e-2757.95WD repeat-containing protein 33 n=2 Tax=Camponotus... [more]
A0A8H8SNN8_9AGAM2.010e-2761.04Polyadenylation factor subunit 2 n=2 Tax=Ceratobas... [more]
A0A2D4P7A4_MICSU4.150e-2762.03Uncharacterized protein (Fragment) n=1 Tax=Micruru... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 27..66
e-value: 1.0E-5
score: 35.0
IPR001680WD40 repeatPFAMPF00400WD40coord: 32..66
e-value: 1.6E-7
score: 31.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 34..75
score: 15.722
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 9..89
e-value: 1.9E-20
score: 74.8
NoneNo IPR availablePANTHERPTHR22836WD40 REPEAT PROTEINcoord: 9..87
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 15..91
score: 18.22
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 14..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig155491contigH-elongata_contig155491:370..681 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig155491.3637.1mRNA_H-elongata_contig155491.3637.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig155491 370..681 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig155491.3637.1 ID=prot_H-elongata_contig155491.3637.1|Name=mRNA_H-elongata_contig155491.3637.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=92bp
IHSFIHSQSRGGPCSNPGTVRIWDWEYYREERALTGHGWDVKTVEWHPYK
SLIVSGSKDNLVKMWDPRTGNSLSTLYGHKNTVMKVSLGVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf