prot_H-elongata_contig155332.3623.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig155332.3623.1
Unique Nameprot_H-elongata_contig155332.3623.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length67
Homology
BLAST of mRNA_H-elongata_contig155332.3623.1 vs. uniprot
Match: A0A6H5L6N5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6N5_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 1.800e-16
Identity = 42/66 (63.64%), Postives = 51/66 (77.27%), Query Frame = 0
Query:    1 MPFLVTYAVALNAIPAVRWLLNKRENAAIEKRNELRWQWGARARGGADRVVERKLRAARAMTRDLK 66
            +PFL+TYAVALN IPAVR++LNKRENA IE RN LR +W    R G D V+ RKL+AA+ MT D+K
Sbjct:  212 LPFLLTYAVALNVIPAVRFVLNKRENAKIEGRNFLRRKWAEAGRSG-DAVISRKLKAAKTMTTDMK 276          
BLAST of mRNA_H-elongata_contig155332.3623.1 vs. uniprot
Match: D8LHB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHB2_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 1.890e-15
Identity = 42/66 (63.64%), Postives = 50/66 (75.76%), Query Frame = 0
Query:    1 MPFLVTYAVALNAIPAVRWLLNKRENAAIEKRNELRWQWGARARGGADRVVERKLRAARAMTRDLK 66
            +PFL+TYAVALN IPAVR++LNKRENA IE RN LR +W    R G   VV RKL+AA+ MT D+K
Sbjct:  446 LPFLLTYAVALNVIPAVRFVLNKRENAKIEGRNFLRRKWAEAGRSGGA-VVSRKLKAAKTMTTDMK 510          
BLAST of mRNA_H-elongata_contig155332.3623.1 vs. uniprot
Match: A0A0G4GCT4_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GCT4_9ALVE)

HSP 1 Score: 54.3 bits (129), Expect = 6.710e-7
Identity = 30/64 (46.88%), Postives = 38/64 (59.38%), Query Frame = 0
Query:    2 PFLVTYAVALNAIPAVRWLLNKRENAAIEKRNELRWQWGARARGGADRVVERKLRAARAMTRDL 65
            P L +YA+ LNAIP VRW LNK +NA I  RN+ R +W A  + G+   V  KL  AR   + L
Sbjct:  446 PALASYALVLNAIPFVRWRLNKSKNAEIRSRNDKRQRWSAYLKSGSA-YVRNKLGQARRFAQRL 508          
BLAST of mRNA_H-elongata_contig155332.3623.1 vs. uniprot
Match: A0A7R9YG27_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YG27_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 1.720e-6
Identity = 29/62 (46.77%), Postives = 41/62 (66.13%), Query Frame = 0
Query:    1 MPFLVTYAVALNAIPAVRWLLNKRENAAIEKRNELRWQWGARARGGADRV--VERKLRAARA 60
            +PFL+ YAVALNAIP +R+  N+R+NA I+KRN  R +  A  R     V  + +K+ AA+A
Sbjct:  493 LPFLIPYAVALNAIPIIRYFKNQRDNAGIQKRNGARQRMRALLRTATSPVSRLSKKIAAAKA 554          
BLAST of mRNA_H-elongata_contig155332.3623.1 vs. uniprot
Match: A0A5C7HNF3_9ROSI (Uncharacterized protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7HNF3_9ROSI)

HSP 1 Score: 50.8 bits (120), Expect = 1.120e-5
Identity = 31/60 (51.67%), Postives = 38/60 (63.33%), Query Frame = 0
Query:    2 PFLVTYAVALNAIPAVRWLLNKRENAAIEKRNELRWQWGARARGGADRVVERKLRAARAM 61
            P L  YA +  AIP VRW LN ++NA IEKRN+ R Q+ ARA    D  + RKL +AR M
Sbjct:  406 PLLQIYAGSFFAIPLVRWFLNLKKNADIEKRNQAREQF-ARALKSPDLPLRRKLLSARDM 464          
BLAST of mRNA_H-elongata_contig155332.3623.1 vs. uniprot
Match: A0A388KS96_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KS96_CHABU)

HSP 1 Score: 50.8 bits (120), Expect = 1.130e-5
Identity = 28/59 (47.46%), Postives = 34/59 (57.63%), Query Frame = 0
Query:    1 MPFLVTYAVALNAIPAVRWLLNKRENAAIEKRNELRWQWGARARGGADRVVERKLRAAR 59
            +PFL  YA +  AIPA+RWLL K+ NA I+KRN  R  W     G     + RKL  AR
Sbjct:  669 LPFLQAYAASFFAIPAIRWLLLKKRNAEIDKRNNTRLGWAVHV-GRPTAPLRRKLLNAR 726          
BLAST of mRNA_H-elongata_contig155332.3623.1 vs. uniprot
Match: UPI000B8D18F7 (LOW QUALITY PROTEIN: uncharacterized protein At5g03900, chloroplastic n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8D18F7)

HSP 1 Score: 48.9 bits (115), Expect = 5.310e-5
Identity = 29/60 (48.33%), Postives = 37/60 (61.67%), Query Frame = 0
Query:    2 PFLVTYAVALNAIPAVRWLLNKRENAAIEKRNELRWQWGARARGGADRVVERKLRAARAM 61
            P L  YA +  AIP +RW +N++ NA IEKRN+ R Q+ ARA    D  + RKL  AR M
Sbjct:  327 PLLQIYAGSFFAIPLIRWFINRKRNADIEKRNQAREQF-ARALELPDLSLRRKLLCARDM 385          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig155332.3623.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5L6N5_9PHAE1.800e-1663.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHB2_ECTSI1.890e-1563.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0G4GCT4_9ALVE6.710e-746.88Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7R9YG27_9STRA1.720e-646.77Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A5C7HNF3_9ROSI1.120e-551.67Uncharacterized protein n=1 Tax=Acer yangbiense Ta... [more]
A0A388KS96_CHABU1.130e-547.46Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
UPI000B8D18F75.310e-548.33LOW QUALITY PROTEIN: uncharacterized protein At5g0... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47380:SF4coord: 1..63
NoneNo IPR availablePANTHERPTHR47380FAMILY NOT NAMEDcoord: 1..63
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..66
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availableTMHMMTMhelixcoord: 4..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig155332contigH-elongata_contig155332:92..292 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig155332.3623.1mRNA_H-elongata_contig155332.3623.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig155332 92..307 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig155332.3623.1 ID=prot_H-elongata_contig155332.3623.1|Name=mRNA_H-elongata_contig155332.3623.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=67bp
MPFLVTYAVALNAIPAVRWLLNKRENAAIEKRNELRWQWGARARGGADRV
VERKLRAARAMTRDLK*
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