prot_H-elongata_contig155004.3609.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig155004.3609.1
Unique Nameprot_H-elongata_contig155004.3609.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length84
Homology
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BLAST of mRNA_H-elongata_contig155004.3609.1 vs. uniprot
Match: D7FUL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUL0_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 5.100e-22
Identity = 48/84 (57.14%), Postives = 56/84 (66.67%), Query Frame = 0 
Query:    1 RIGKYVAANFVKGPCRPLGSTVVRDDFIHPSKMQQTNEAPGESSTMVSAAMGDIRTKNREGVSPDLLFGHTRDSKHADKLRQVR 84
            RIGK +A    K P   LGSTV R+DF+HPS M       G+ + M+SA+  DI+ KNREGVS DLLFGH RDS HAD LRQ R
Sbjct:   28 RIGKAIAKRLAKAPRPALGSTVEREDFVHPSTMTNNTVVSGDDTKMMSAS--DIKDKNREGVSFDLLFGHVRDSHHADTLRQDR 109
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig155004.3609.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUL0_ECTSI5.100e-2257.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig155004contigH-elongata_contig155004:805..1417 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig155004.3609.1mRNA_H-elongata_contig155004.3609.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig155004 805..1417 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig155004.3609.1 ID=prot_H-elongata_contig155004.3609.1|Name=mRNA_H-elongata_contig155004.3609.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp
RIGKYVAANFVKGPCRPLGSTVVRDDFIHPSKMQQTNEAPGESSTMVSAA
MGDIRTKNREGVSPDLLFGHTRDSKHADKLRQVR
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