prot_H-elongata_contig1550.3608.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1550.3608.1
Unique Nameprot_H-elongata_contig1550.3608.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length699
Homology
BLAST of mRNA_H-elongata_contig1550.3608.1 vs. uniprot
Match: A0A6H5KRZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ3_9PHAE)

HSP 1 Score: 356 bits (914), Expect = 1.670e-107
Identity = 275/648 (42.44%), Postives = 344/648 (53.09%), Query Frame = 0
Query:   97 EEASGSGRGGGSRASPGELRARVVELELQRAEADELLKANADESIRFQVQVEQLKNVVQSLSHAPTSGWRAAEPWDEGSATSGEEASEITDLSVLLRDVPGVDPSIILALYRTPWADGAFDGIRQEEACFEWQGKDSTGTWSSKPTSLPFQLFSLP-------YEPPQQPVGQAA-PAVPRSEDRGRSTSNLDRNAAFSPTATTGNSVTRSSSERTEAKQASGGRGERAGVRGFGGRIGEAVAAFGGVGTGRENGGGI--------VTNEGVSARFNLGDVHLPSDHWEWVGGWIVDTEGDASADEDGWIYGRTTAEISGIARG-------GMRRGTGYERRPSPVGA--------GMSAGQEPHEAEEEVRREPGDWNVLGPGSKDSAGVDGPGRGGGVSD-----EGSGVGSSDASGAAL-------------------LRRRRLVRLRTVVRLDGARESTKIFLETMQRVCSLEILVRKLSQQVVSLHRQVTGLEGHVAFLAPLQPKLRQACALGRRDRQRGDALQRRLREAENELKVLKRCMGTSA-------PATPRAPPQVSAATTTGSSKWPV---LP-----RASAED-------RTAGPGSINTWYAANTTSSGEGEGKGPWGWVGGVAHRAAGNLSRR 667
            +++S +G G     + G LRARVVELELQRAEA + ++   D SIR +VQVEQLKN+VQSLSHA  S     + W +GS+ +     E  DL  LLRDVPGVDPS++L L+RTPWAD   +GIR+EE+CFEWQGKDS G WSS+  + P +L SLP       + PPQ         ++P+S             +     A TG     +   R EA   +G      G+R    +IG A+AA      GR  GGGI        VT+EGV+ RF L DV LPS HWEWVGGW+VD+E +AS+D+DGWIYGR+ +EIS IA G       GMR  +      S   A        G+  G    EA  E  ++ GD +                  G  SD          G  DA G                      LRRRRLVRLR V  +DGAR+ST   LE  +R+ S+EILVRKLS+QVV+  RQ+T LE  VAFLAPLQPKLR ACALGR+DR RGDALQ +L EAENELKVL+RCM T++       P  P APP   A +   ++  P+   +P     + + ED       R  G G ++                  WGWV GVA RAAG L RR
Sbjct:  233 QKSSSNGGGSAREQAVGALRARVVELELQRAEAADEMREKTDRSIRLEVQVEQLKNIVQSLSHA--SSREETQAWGQGSSAT-TRTQETVDLDPLLRDVPGVDPSVLLLLHRTPWADVVLEGIRKEESCFEWQGKDSRGAWSSRLGAFPTELSSLPLHHLAGPHPPPQXXXXXXXLSSLPQSXXXXXXXXXXXXRSRSPTLALTG--FVTADHARCEAGGQAGSDARAGGLRE---KIGGAMAAV--AAAGRGLGGGIGGAPGWRMVTDEGVTFRFELDDVGLPSHHWEWVGGWMVDSETEASSDQDGWIYGRSPSEISEIALGRTSSHSNGMRSSSSSPEISSSRSAADATAGAAGVGDGAREPEASSENTQD-GDESXXXXXXXXXXXXXXXXXSGNYSDGDIASSADNKGEEDAKGPRXXXXXXXXXXXXXXXXXXWGLRRRRLVRLRMVRMVDGARDSTISVLEMFRRLSSMEILVRKLSRQVVTQQRQMTALESQVAFLAPLQPKLRMACALGRKDRMRGDALQGKLIEAENELKVLRRCMETTSGTGTGTGPRGPAAPPLAPATSRRAAAPAPLRAAVPSGRNVKGATEDDDGVSARRAGGDGXVDXXXXXXXXXXXAAA----WGWVEGVAQRAAGTLVRR 865          
BLAST of mRNA_H-elongata_contig1550.3608.1 vs. uniprot
Match: D7FLV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLV6_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 1.040e-32
Identity = 75/120 (62.50%), Postives = 90/120 (75.00%), Query Frame = 0
Query:  113 GELRARVVELELQRAEADELLKANADESIRFQVQVEQLKNVVQSLSHAPTSGWRAAEPWDEGSATSGEEASEITDLSVLLRDVPGVDPSIILALYRTPWADGAFDGIRQEEACFEWQGKD 232
            G LRARVVELELQRAEA + ++   D SIR +VQVEQLKN+VQSLSHA  S     + W +GSAT+      + DL  LLRDVPGV+PS++L L+RTPWAD   +GIR+EEACFEWQGKD
Sbjct:  244 GALRARVVELELQRAEAADEMREKTDRSIRLEVQVEQLKNIVQSLSHA--SSREETQGWGQGSATTTRIQGTV-DLDPLLRDVPGVNPSVLLLLHRTPWADVVLEGIRKEEACFEWQGKD 360          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1550.3608.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRZ3_9PHAE1.670e-10742.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLV6_ECTSI1.040e-3262.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 566..586

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1550contigH-elongata_contig1550:3190..8203 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1550.3608.1mRNA_H-elongata_contig1550.3608.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1550 2639..8296 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1550.3608.1 ID=prot_H-elongata_contig1550.3608.1|Name=mRNA_H-elongata_contig1550.3608.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=699bp
MANVDTDTLAGATSDATRSPPVPAAADAAAALPRVQTEETKSTRSAYGPL
QGVGDLLSDWGLGGRGRGGHGNARVGAGIFSGEDPLGEKLLYESPAEEAS
GSGRGGGSRASPGELRARVVELELQRAEADELLKANADESIRFQVQVEQL
KNVVQSLSHAPTSGWRAAEPWDEGSATSGEEASEITDLSVLLRDVPGVDP
SIILALYRTPWADGAFDGIRQEEACFEWQGKDSTGTWSSKPTSLPFQLFS
LPYEPPQQPVGQAAPAVPRSEDRGRSTSNLDRNAAFSPTATTGNSVTRSS
SERTEAKQASGGRGERAGVRGFGGRIGEAVAAFGGVGTGRENGGGIVTNE
GVSARFNLGDVHLPSDHWEWVGGWIVDTEGDASADEDGWIYGRTTAEISG
IARGGMRRGTGYERRPSPVGAGMSAGQEPHEAEEEVRREPGDWNVLGPGS
KDSAGVDGPGRGGGVSDEGSGVGSSDASGAALLRRRRLVRLRTVVRLDGA
RESTKIFLETMQRVCSLEILVRKLSQQVVSLHRQVTGLEGHVAFLAPLQP
KLRQACALGRRDRQRGDALQRRLREAENELKVLKRCMGTSAPATPRAPPQ
VSAATTTGSSKWPVLPRASAEDRTAGPGSINTWYAANTTSSGEGEGKGPW
GWVGGVAHRAAGNLSRRSLSFPGGGSPAGEESVKLDGDGDEGDAGGPV*
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