mRNA_H-elongata_contig15499.3607.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig15499.3607.1 vs. uniprot
Match: D8LDB9_ECTSI (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDB9_ECTSI) HSP 1 Score: 157 bits (397), Expect = 1.650e-42 Identity = 73/140 (52.14%), Postives = 103/140 (73.57%), Query Frame = 1
Query: 1 YVLFRPGLMEFIKTLSPLYELVIWTASAKPYADIVINHIDPGGKYFSGRLYREACLRYDGIYIKDLKRLGRGMESVVLLDDHVYSFGLTLDNGVLISPWTGDKD--DSSLFEAFQLLECVANVSDVRVPLIQTYNFYKKL 414
YV RPGL F++ ++ +YELV+WTAS + YAD +I+ +DP G F+ R YR++CLR+ + +KDL+RLGR M +VVLLD++VYSFGLTLDNGV ISPWTG K+ +S L A+ LL ++ DVRVPL+ ++ +K+
Sbjct: 447 YVQLRPGLARFLEKVAAIYELVVWTASGRSYADAIIDLLDPAGDIFAERFYRDSCLRHHNLCVKDLRRLGRPMNTVVLLDNYVYSFGLTLDNGVPISPWTGAKEAKNSGLTTAYSLLRGISRFPDVRVPLVTAFDLQRKI 586
BLAST of mRNA_H-elongata_contig15499.3607.1 vs. uniprot
Match: A0A6H5JK84_9PHAE (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK84_9PHAE) HSP 1 Score: 158 bits (400), Expect = 2.500e-42 Identity = 74/140 (52.86%), Postives = 103/140 (73.57%), Query Frame = 1
Query: 1 YVLFRPGLMEFIKTLSPLYELVIWTASAKPYADIVINHIDPGGKYFSGRLYREACLRYDGIYIKDLKRLGRGMESVVLLDDHVYSFGLTLDNGVLISPWTGDKD--DSSLFEAFQLLECVANVSDVRVPLIQTYNFYKKL 414
YV RPGL F++ ++ +YELV+WTAS K YAD +I+ +DP G F+ R YR++CLR+ + +KDL+RLGR M +VVLLD++VYSFGLTLDNGV ISPWTG K+ +S L A+ LL ++ DVRVPL+ ++ +K+
Sbjct: 490 YVQLRPGLARFLEKVAAIYELVVWTASGKSYADAIIDLLDPAGDIFAERFYRDSCLRHHNLCVKDLRRLGRPMNTVVLLDNYVYSFGLTLDNGVPISPWTGAKEAKNSGLTTAYSLLRGISRFPDVRVPLVTAFDLQRKI 629
BLAST of mRNA_H-elongata_contig15499.3607.1 vs. uniprot
Match: A0A1R2CCD5_9CILI (FCP1 homology domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CCD5_9CILI) HSP 1 Score: 127 bits (318), Expect = 6.990e-34 Identity = 63/136 (46.32%), Postives = 88/136 (64.71%), Query Frame = 1
Query: 1 YVLFRPGLMEFIKTLSPLYELVIWTASAKPYADIVINHIDPGGKYFSGRLYREACLRYDGIYIKDLKRLGRGMESVVLLDDHVYSFGLTLDNGVLISPWTGDKDDSSLFEAFQLLECVANVSDVRVPLIQTYNFYK 408
+V +RPGLMEF++ + ++ELVI+TAS K YA+ VIN +DP K RLYR+ C++ G ++KDL RLGR + VV+LD+ + SF LDNG+LI W D D+ L++ LLE + N DVR L +N K
Sbjct: 78 FVKYRPGLMEFLRKVLKVFELVIYTASTKEYAEQVINKLDPQRKILKYRLYRDDCIQIGGHFVKDLSRLGRDLSQVVILDNSITSFAHHLDNGILILSWFDDPSDNELWKVANLLEQLINTQDVRPILNSIFNLPK 213
BLAST of mRNA_H-elongata_contig15499.3607.1 vs. uniprot
Match: A0A1R2CP47_9CILI (FCP1 homology domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CP47_9CILI) HSP 1 Score: 126 bits (317), Expect = 9.380e-34 Identity = 62/136 (45.59%), Postives = 88/136 (64.71%), Query Frame = 1
Query: 1 YVLFRPGLMEFIKTLSPLYELVIWTASAKPYADIVINHIDPGGKYFSGRLYREACLRYDGIYIKDLKRLGRGMESVVLLDDHVYSFGLTLDNGVLISPWTGDKDDSSLFEAFQLLECVANVSDVRVPLIQTYNFYK 408
YV +RPGLMEF++ + +E+V++TASAK YA+ VIN +DP K RLYR+ C++ G ++KDL RLGR + V++LD+ + SF LDNG+ I W D +DS L++ LLE + N DVR L +N K
Sbjct: 78 YVKYRPGLMEFLRKVLKFFEVVVYTASAKEYAEQVINKLDPQRKMLKYRLYRDDCMQIGGHFVKDLSRLGRDLSQVIILDNSITSFAHHLDNGIPILSWFDDPNDSELWKVTNLLEQLINTQDVRPILNSIFNLPK 213
BLAST of mRNA_H-elongata_contig15499.3607.1 vs. uniprot
Match: A0A1R2C660_9CILI (FCP1 homology domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2C660_9CILI) HSP 1 Score: 123 bits (309), Expect = 1.530e-32 Identity = 62/136 (45.59%), Postives = 85/136 (62.50%), Query Frame = 1
Query: 1 YVLFRPGLMEFIKTLSPLYELVIWTASAKPYADIVINHIDPGGKYFSGRLYREACLRYDGIYIKDLKRLGRGMESVVLLDDHVYSFGLTLDNGVLISPWTGDKDDSSLFEAFQLLECVANVSDVRVPLIQTYNFYK 408
YV FRPGLMEF+ + +ELVI+TAS+K YA+ VIN DP K RLYRE C++ +G ++KDL RLGR + ++++D+ V +F LDNG+ I W D +D L + LLE + N DVR L +N K
Sbjct: 78 YVKFRPGLMEFLNKVLKFFELVIYTASSKEYAEQVINAFDPQRKILKYRLYREDCIQIEGHFVKDLSRLGRDLSKIIIVDNSVTAFAYHLDNGIPIVSWFDDPNDCELHKVGTLLEKLINTHDVRPVLNSIFNLPK 213
BLAST of mRNA_H-elongata_contig15499.3607.1 vs. uniprot
Match: A0A1R2BBL2_9CILI (FCP1 homology domain-containing protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BBL2_9CILI) HSP 1 Score: 123 bits (308), Expect = 2.220e-32 Identity = 64/138 (46.38%), Postives = 85/138 (61.59%), Query Frame = 1
Query: 1 YVLFRPGLMEFIKTLSPLYELVIWTASAKPYADIVINHIDPGGKYFSGRLYREACLRYDGIYIKDLKRLGRGMESVVLLDDHVYSFGLTLDNGVLISPWTGDKDDSSLFEAFQLLECVANVSDVRVPLIQTYNFYKKL 414
YV +RPGLMEF+ + +ELVI+TAS K YA+ VIN +DP K RLYRE CL+ G +IKDL RLGR + V++LD+ + SF LDNG+ I W D +D L++ LLE + DVR L +N K +
Sbjct: 78 YVKYRPGLMEFLYKVLNFFELVIYTASTKEYAEQVINKLDPQRKILKYRLYREDCLQIGGHFIKDLSRLGRDLSHVIILDNSIASFAHHLDNGIPILSWFDDPNDGELWKVGNLLEQLVRTQDVRPILNSLFNLPKMI 215
BLAST of mRNA_H-elongata_contig15499.3607.1 vs. uniprot
Match: A0A7S2V5C9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5C9_9STRA) HSP 1 Score: 116 bits (290), Expect = 4.200e-30 Identity = 55/132 (41.67%), Postives = 85/132 (64.39%), Query Frame = 1
Query: 13 RPGLMEFIKTLSPLYELVIWTASAKPYADIVINHIDPGGKYFSGRLYREACLRYDGIYIKDLKRLGRGMESVVLLDDHVYSFGLTLDNGVLISPWTGDKDDSSLFEAFQLLECVANVSDVRVPLIQTYNFYK 408
RP L F++T+S L+E++++TAS K YAD +++ IDP KY RL+R+ACL +G ++KDL LGR + VVL+D+ Y++G +DNG+ I W D DD+ L + L + NV DVR + + + Y+
Sbjct: 52 RPHLEHFLQTVSELFEVIVFTASQKVYADTLLDIIDPEKKYVQYRLFRDACLPVEGNFLKDLGVLGRELSQVVLIDNSPYAYGYQVDNGIPIESWFDDPDDTELLDLIPFLRHIHNVEDVRPFVREKFRTYE 183
BLAST of mRNA_H-elongata_contig15499.3607.1 vs. uniprot
Match: A0A564YPP4_HYMDI (FCP1 homology domain-containing protein n=1 Tax=Hymenolepis diminuta TaxID=6216 RepID=A0A564YPP4_HYMDI) HSP 1 Score: 114 bits (284), Expect = 6.570e-29 Identity = 54/125 (43.20%), Postives = 81/125 (64.80%), Query Frame = 1
Query: 1 YVLFRPGLMEFIKTLSPLYELVIWTASAKPYADIVINHIDPGGKYFSGRLYREACLRYDGIYIKDLKRLGRGMESVVLLDDHVYSFGLTLDNGVLISPWTGDKDDSSLFEAFQLLECVANVSDVR 375
YV RP L F++ +S LYE+V++TAS K YAD ++N +DP KY RL+RE+C+ +G Y+KDL+ LGR + V++D+ +FG L NG+ I W D+ D+ L + LE +A ++DVR
Sbjct: 10 YVRLRPHLQPFLEKVSQLYEVVLFTASTKVYADQLVNLLDPKKKYIKHRLFRESCVFVNGNYVKDLRVLGRDLTKTVIIDNSPQAFGYQLSNGIPIESWFTDQQDTELIKLIPFLERLAKLTDVR 134
BLAST of mRNA_H-elongata_contig15499.3607.1 vs. uniprot
Match: A0A4P9YP35_ROZAC (FCP1 homology domain-containing protein n=2 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A4P9YP35_ROZAC) HSP 1 Score: 117 bits (292), Expect = 7.220e-29 Identity = 59/138 (42.75%), Postives = 86/138 (62.32%), Query Frame = 1
Query: 1 YVLFRPGLMEFIKTLSPLYELVIWTASAKPYADIVINHIDPGGKYFSGRLYREACLRYDGIYIKDLKRLGRGMESVVLLDDHVYSFGLTLDNGVLISPWTGDKDDSSLFEAFQLLECVANVSDVRVPLIQTYNFYKKL 414
YVL RP L EF++ +S ++E+VI+TAS K YAD ++N +DP KY RL+R++CL G Y+KDL LGR + +++D+ SFG L NG+ I W G +DD+ L + L + V+DVR P I+ K+L
Sbjct: 207 YVLKRPFLQEFLEKVSTMFEVVIFTASQKVYADKLLNILDPNRKYIKHRLFRDSCLYVHGNYLKDLTVLGRDLSQTIIVDNAPQSFGFQLSNGIPIESWYGARDDTQLLSVLEFLSDIVGVTDVR-PTIENAFRLKEL 343
BLAST of mRNA_H-elongata_contig15499.3607.1 vs. uniprot
Match: G7JZ58_MEDTR (NLI interacting factor-like phosphatase n=1 Tax=Medicago truncatula TaxID=3880 RepID=G7JZ58_MEDTR) HSP 1 Score: 115 bits (289), Expect = 8.800e-29 Identity = 52/138 (37.68%), Postives = 82/138 (59.42%), Query Frame = 1
Query: 1 YVLFRPGLMEFIKTLSPLYELVIWTASAKPYADIVINHIDPGGKYFSGRLYREACLRYDGIYIKDLKRLGRGMESVVLLDDHVYSFGLTLDNGVLISPWTGDKDDSSLFEAFQLLECVANVSDVRVPLIQTYNFYKKL 414
YV +RP L EF+ +S ++E++++TA + YAD ++N +DP K F RL+RE+C+ D Y+KDL LGR + V ++D +SFG ++NG+ I W D D+ L LE + V DVR + +N +K+
Sbjct: 163 YVRYRPHLKEFLDEVSGIFEIIVFTAGQRIYADKLLNKLDPSRKIFRHRLFRESCVNVDEKYVKDLSILGRDLARVTMIDSSPHSFGFQVENGIPIETWFADPSDNKLLSLIPFLESLVEVDDVRTEIKNRFNLQEKI 300 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15499.3607.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15499.3607.1 >prot_H-elongata_contig15499.3607.1 ID=prot_H-elongata_contig15499.3607.1|Name=mRNA_H-elongata_contig15499.3607.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=130bp MEFIKTLSPLYELVIWTASAKPYADIVINHIDPGGKYFSGRLYREACLRYback to top mRNA from alignment at H-elongata_contig15499:2557..4092+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig15499.3607.1 ID=mRNA_H-elongata_contig15499.3607.1|Name=mRNA_H-elongata_contig15499.3607.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1536bp|location=Sequence derived from alignment at H-elongata_contig15499:2557..4092+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig15499:2557..4092+ >mRNA_H-elongata_contig15499.3607.1 ID=mRNA_H-elongata_contig15499.3607.1|Name=mRNA_H-elongata_contig15499.3607.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=780bp|location=Sequence derived from alignment at H-elongata_contig15499:2557..4092+ (Himanthalia elongata Himel1 dioecious)back to top |