prot_H-elongata_contig15447.3584.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15447.3584.1
Unique Nameprot_H-elongata_contig15447.3584.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length157
Homology
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BLAST of mRNA_H-elongata_contig15447.3584.1 vs. uniprot
Match: A0A6H5L6K6_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6K6_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 7.740e-14
Identity = 40/68 (58.82%), Postives = 46/68 (67.65%), Query Frame = 0 
Query:   14 GGAGHALWTGVAKMLRAQSDKRDWMAESCLRRCLVINNRLYGPDHPEVAADMSNLAEVLMDKSDFDGA 81
            G +  AL   V  MLR QSD RD MAE CLRR L I+ +L GPDHPEVA D+SNLAEVL D  + + A
Sbjct: 2193 GESAVALLASVVAMLREQSDARDAMAEPCLRRSLEIHEKLLGPDHPEVATDLSNLAEVLQDNGEIEHA 2260
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15447.3584.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L6K6_9PHAE7.740e-1458.82Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13424TPR_12coord: 65..123
e-value: 8.1E-8
score: 32.4
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 37..121
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 37..121
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 19..149
e-value: 1.2E-24
score: 88.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 39..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15447contigH-elongata_contig15447:1567..4284 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15447.3584.1mRNA_H-elongata_contig15447.3584.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15447 1567..4284 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15447.3584.1 ID=prot_H-elongata_contig15447.3584.1|Name=mRNA_H-elongata_contig15447.3584.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=157bp
DTVVPSVSPPCPAGGAGHALWTGVAKMLRAQSDKRDWMAESCLRRCLVIN
NRLYGPDHPEVAADMSNLAEVLMDKSDFDGAEPLVRRALEIRTRFLDPFH
ADVGHSRLNLSLIQRNKGDNQRACLNQALANKIWSRAFGGGAEERASKND
CSRRSEG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf