mRNA_H-elongata_contig15443.3580.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig15443.3580.1
Unique NamemRNA_H-elongata_contig15443.3580.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig15443.3580.1 vs. uniprot
Match: D7FI85_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI85_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 1.320e-69
Identity = 116/195 (59.49%), Postives = 140/195 (71.79%), Query Frame = 1 
Query:   85 GLLDGLPISPFPTTAETAASTEKDNIRVVCQGGLEDERAAKPQEVPHTRADCWQELVERTRAHPKYADHYTFKADATWVKASPCGDACDSLPQVVAVDCEMCISKDPVTKECNSGELLRMSIVRGEDGKKLIDTLVRPANPVIDWVTKIHGVGSQQMTGVQFTLSRHAQAAMRRICCERTVIIGHALFNDLKALK 669
            G+ DGLPISPF   A+     +   +  V            P  +PH +AD WQ LVERTRAHPK+A +Y+F+ DATWV ASPCGD+C  LPQV+A+DCEMC+S+DP++KE N  ELLR+SIVRGEDG+KL+DTLVRP NPV+DW T IHGV  + + GV FT  RHAQ A+ RICC  TVIIGHAL NDL ALK
Sbjct:  528 GIFDGLPISPFVAAADKDKEEKPAAVAAV----------VAPASIPHPKADVWQGLVERTRAHPKFAKNYSFETDATWVTASPCGDSCPGLPQVIALDCEMCMSEDPLSKERNGKELLRLSIVRGEDGEKLMDTLVRPGNPVVDWRTDIHGVAPEHLEGVMFT-HRHAQVAISRICCPHTVIIGHALNNDLSALK 711
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BLAST of mRNA_H-elongata_contig15443.3580.1 vs. uniprot
Match: A0A7R9Y9T2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y9T2_9STRA)

HSP 1 Score: 148 bits (373), Expect = 1.750e-37
Identity = 74/144 (51.39%), Postives = 99/144 (68.75%), Query Frame = 1 
Query:  241 WQELVERTRAHPKYADHYTFKADATWVKASPCGDACDSLPQVVAVDCEMCISKDPVTKECNSGELLRMSIVRGEDGKK-LIDTLVRPANPVIDWVTKIHGVGSQQMTGVQFTLSRHAQAAMRRICCERTVIIGHALFNDLKALK 669
            W++L ++   H K+   ++F  D++WV+    GD C  LPQ +A+DCEMC  KDPVT E ++  L R S+V GE GK  LIDTLV+P  PV D+ T IHG+  +Q+ GV FTL RHAQAAMR IC  +T+IIGHA+ NDL +L+
Sbjct:  386 WEKLRKKCSRHRKFETLFSFDTDSSWVRPREYGDWCKDLPQYIAIDCEMCGGKDPVTGEIDAKVLCRFSVVSGEGGKDVLIDTLVQPHMPVQDYRTDIHGITKEQLEGVPFTL-RHAQAAMRSICSSKTIIIGHAVHNDLVSLR 528
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BLAST of mRNA_H-elongata_contig15443.3580.1 vs. uniprot
Match: A0A7S4EFC5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EFC5_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.010e-33
Identity = 85/211 (40.28%), Postives = 124/211 (58.77%), Query Frame = 1 
Query:   88 LLDGLPISPFPTTAETAASTEKDNIRVVCQGGLEDERAAKPQE----VPHTRA--DCWQELVERTRAHPKYADHYTF----KAD------ATWVKASPCGDACDSLPQVVAVDCEMCISKDPVTKECNSGELLRMSIVRGEDGKK-LIDTLVRPANPVIDWVTKIHGVGSQQMTGVQFTLSRHAQAAMRRICCERTVIIGHALFNDLKALK 669
             L  LP++ F  +   A   +K+   VV     +D+   K +E    +P + A    WQ+ V  +R H +Y+  + F    K D      ATW+KA P G  C S PQ +A+DCEMC S+DP++   NS  L R+S+V  E  ++ L+DTLV+PA PV D+ T+I+G+  + +  V+FTL RHAQA M ++C E T+I+GHA+ NDL ALK
Sbjct:  174 FLSSLPVASF--SIPGATPVKKEEQIVVPTKAPKDKATPKKEEKGPLLPTSTAIGRKWQKPVIESRKHERYSGAHDFARHKKLDTENGIGATWIKAKPYGSWCKSNPQAIAIDCEMCESQDPLSGAKNSKALCRISVVNAEKPEEVLLDTLVKPAWPVTDYRTRINGIKKENLDNVEFTL-RHAQAFMLKLCSEETIIVGHAIVNDLVALK 381
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BLAST of mRNA_H-elongata_contig15443.3580.1 vs. uniprot
Match: B5Y560_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y560_PHATC)

HSP 1 Score: 137 bits (344), Expect = 1.050e-33
Identity = 66/155 (42.58%), Postives = 103/155 (66.45%), Query Frame = 1 
Query:  241 WQELVERTRAHPKYADHYTF---KA---------DATWVKASPCGDACDSLPQVVAVDCEMCISKDPVTKECNSGELLRMSIVRGEDGKKLIDTLVRPANPVIDWVTKIHGVGSQQMTGVQFTLSRHAQAAMRRICCERTVIIGHALFNDLKALK 669
            W + +++ R H KYA  Y F   KA          +TW++A P G+ C   PQ +A+DCEMC ++DPV+ + N+ +L R+SIV  E+ + L+D+LV+P+ PV+D+ ++I+G+  + + GVQFTL RH QA +  +C + TVI+GHAL NDL A++
Sbjct:  237 WMKAIQQARQHHKYATAYDFVKYKALDAEIGLDPSSTWIQAKPYGEWCKGFPQAIAIDCEMCETEDPVSGKHNAKDLCRVSIVNAENDEVLLDSLVKPSWPVVDYRSRINGITEEHLKGVQFTL-RHTQAFLMALCSQETVILGHALHNDLAAMR 390
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BLAST of mRNA_H-elongata_contig15443.3580.1 vs. uniprot
Match: A0A7S2KAR6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KAR6_9STRA)

HSP 1 Score: 134 bits (337), Expect = 9.820e-33
Identity = 67/148 (45.27%), Postives = 97/148 (65.54%), Query Frame = 1 
Query:  241 WQELVERTRAHPKYADHYTFKADAT----WVKASPCGDACDSLPQVVAVDCEMCISKDPVTKECNSGELLRMSIVRGEDGKK-LIDTLVRPANPVIDWVTKIHGVGSQQMTGVQFTLSRHAQAAMRRICCERTVIIGHALFNDLKALK 669
            W++LV+ TR+HP+Y   Y F   A     WV+A   G  C + PQ +A+DCEMC +K P T   N+  L R+S++ G++  + LIDTLV+P  PV D+ ++I+G+  + +  VQFTL +HAQ  M+ +C   TVIIGHA+ NDL+ALK
Sbjct:  246 WKDLVQLTRSHPRYESSYRFSQTAEESDGWVRAKAFGSWCAAFPQSIAIDCEMCATKCPQTNTVNNSALCRLSVINGDNPSEVLIDTLVKPDWPVSDYRSRINGIKEEHLAEVQFTL-KHAQEFMQALCSNETVIIGHAVHNDLEALK 392
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BLAST of mRNA_H-elongata_contig15443.3580.1 vs. uniprot
Match: A0A448Z8R7_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8R7_9STRA)

HSP 1 Score: 133 bits (334), Expect = 2.270e-32
Identity = 68/154 (44.16%), Postives = 101/154 (65.58%), Query Frame = 1 
Query:  241 WQELVERTRAHPKYADHYTF----------KADATWVKASPCGDACDSLPQVVAVDCEMCISKDPVTKECNSGELLRMSIVRGEDGKK-LIDTLVRPANPVIDWVTKIHGVGSQQMTGVQFTLSRHAQAAMRRICCERTVIIGHALFNDLKALK 669
            WQ+ +  TR H +Y + + F            +ATW KA P G  C+S PQ +A+DCEMC ++DP+T   NS  L R+S+V  E+ ++ L+DTLV+PA PV D+ ++I+G+  + +  V+FTL RHAQA M ++C + TVI+GHA+ NDL +LK
Sbjct:  216 WQKSIIETRKHDRYDNSHNFDRYKELDAENNIEATWFKAKPYGPWCESNPQAIAIDCEMCETQDPLTGGKNSKALCRISVVNAENPEEVLLDTLVKPAWPVTDYRSRINGIKKEHLDXVEFTL-RHAQAFMLKLCSQETVIVGHAVSNDLVSLK 368
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BLAST of mRNA_H-elongata_contig15443.3580.1 vs. uniprot
Match: A0A7S3URN3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URN3_HETAK)

HSP 1 Score: 130 bits (328), Expect = 2.970e-32
Identity = 75/153 (49.02%), Postives = 100/153 (65.36%), Query Frame = 1 
Query:  241 WQELVERTRAHPKYADHYTFK-ADATWVKASPCGDACDSLP---QVVAVDCEMCISKDPVTKECNSGELLRMSIVRGEDGKK--LIDTLVRPANPVIDWVTKIHGVGSQQMTGVQFTLSRHAQAAMRRICCERTVIIGHALFNDLKALKARKA 681
            W  L E TR HPKYA  + F+ AD +WV          SLP    V+A+DCEMC S+DPV+K  N  EL+R+S+VRG  G    ++D+LVRP N V D   +I+G+G  Q+ GVQFTL RHAQAA+  +   +T+++GHAL NDL+AL+ R A
Sbjct:  256 WAGLAELTRRHPKYAALFAFEGADGSWVSPPA------SLPGAAAVLALDCEMCESEDPVSKAKNEKELVRVSVVRGAAGAADVVLDSLVRPLNTVTDHRERINGIGPAQLAGVQFTL-RHAQAALLHLVDSKTLLVGHALHNDLEALRFRPA 401
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BLAST of mRNA_H-elongata_contig15443.3580.1 vs. uniprot
Match: A0A4D9CRL8_9STRA (C3H1-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRL8_9STRA)

HSP 1 Score: 132 bits (332), Expect = 7.910e-32
Identity = 83/226 (36.73%), Postives = 118/226 (52.21%), Query Frame = 1 
Query:   91 LDGLPISPFPTTAETAASTEKDNI----RVVCQGGLEDERAAKP---------------------QEVPHTRADCWQELVERTRAHPKYADHYTF-----KADATWVKASPCGDACDSLPQVVAVDCEMCISKDPVTKECNSGELLRMSIVRGEDGKK-LIDTLVRPANPVIDWVTKIHGVGSQQMTGVQFTLSRHAQAAMRRICCERTVIIGHALFNDLKALKAR 675
            L  LP++PF    +   +T  D+      +V   G E E +A+                      +EV       W   V+ T  H ++  +Y       K +A W++A   G  C  LP V+A+DCEMC ++DPV+ E +   L+R+S+V G D K+ L+DTLV P+ PVID+ T IHG+  + +  V FT  RHAQAAM  +CC  TV+IGH L NDL ALK +
Sbjct:  242 LSALPVTPFTIARKPNGATRDDDEPEDGELVQGEGEEGEESAQSVVGANLSQHAKEESCQAEAVKEEVCFHAGSPWTGCVKATMEHARFEANYRALAAQKKGEADWIEAKKHGAWCRDLPHVLALDCEMCATRDPVSMEQDGKALIRLSVVCGHDEKQVLLDTLVLPSLPVIDYRTDIHGIRPEDLRQVMFTF-RHAQAAMLHLCCTETVLIGHGLCNDLTALKMK 466
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BLAST of mRNA_H-elongata_contig15443.3580.1 vs. uniprot
Match: A0A1E7FWM9_9STRA (C3H1-type domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWM9_9STRA)

HSP 1 Score: 125 bits (313), Expect = 2.280e-29
Identity = 67/153 (43.79%), Postives = 95/153 (62.09%), Query Frame = 1 
Query:  241 WQELVERTRAHPKYADHYTFKA----------DATWVKASPCGDACDSLPQVVAVDCEMCISKDPVTKECNSGELLRMSIVRGEDGKK-LIDTLVRPANPVIDWVTKIHGVGSQQMTGVQFTLSRHAQAAMRRICCERTVIIGHALFNDLKAL 666
            WQ  V  +R H +Y + + F             ++W+KA   G  C S PQ +A+DCEMC S+DP++   N+  L R+S+V  E  ++ L+DTLV+P+ PV D+ T+I+GV  + +  V+FTL RHAQA M  +C E TVI+GHAL NDL AL
Sbjct:  251 WQNAVIESRKHARYNNSFDFNRYQENDAKNGIQSSWIKAKAYGSWCASNPQAIAIDCEMCESQDPLSGAKNAKALCRLSVVNAEKPEEVLLDTLVKPSWPVTDYRTRINGVTKEHLDPVEFTL-RHAQAFMMALCNEETVIVGHALHNDLVAL 402
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BLAST of mRNA_H-elongata_contig15443.3580.1 vs. uniprot
Match: A0A7S4NAX0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NAX0_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.050e-28
Identity = 72/171 (42.11%), Postives = 102/171 (59.65%), Query Frame = 1 
Query:  208 PQEVP--HTRADCWQELVERTRAHPKYADHYTF-KADAT------WVKASPCG--DACDSLPQVVAVDCEMCISKDPVTKECNSGELLRMSIVRGED------GKKLIDTLVRPANPVIDWVTKIHGVGSQQMTGVQFTLSRHAQAAMRRICCERTVIIGHALFNDLKALK 669
            PQ +P   TR   W + V++TR HP Y+    F +A A       W+KA P G   A  + P  +A+DCEMC ++DPVT + ++  L R+S+V   D      GK L+DTLV+P  PV+++VT +HG+    +  VQFTL RHAQ  M  I  E TV++GHA+ NDL +L+
Sbjct:  136 PQPLPLSDTRGHRWVDAVKKTRGHPLYSKSLNFERAKAQNPGAFRWIKARPPGPWSANGACPAAIAMDCEMCQTRDPVTGKMDAKALCRLSVVDASDPYDPEGGKVLLDTLVKPHWPVVNYVTWVHGIKPADLANVQFTL-RHAQDFMMSIMTEETVVVGHAVHNDLMSLR 305
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15443.3580.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI85_ECTSI1.320e-6959.49Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7R9Y9T2_9STRA1.750e-3751.39Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S4EFC5_9STRA1.010e-3340.28Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
B5Y560_PHATC1.050e-3342.58Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S2KAR6_9STRA9.820e-3345.27Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A448Z8R7_9STRA2.270e-3244.16Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S3URN3_HETAK2.970e-3249.02Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9CRL8_9STRA7.910e-3236.73C3H1-type domain-containing protein n=2 Tax=Monodo... [more]
A0A1E7FWM9_9STRA2.280e-2943.79C3H1-type domain-containing protein n=1 Tax=Fragil... [more]
A0A7S4NAX0_9STRA1.050e-2842.11Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15443contigH-elongata_contig15443:1..3259 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score238.8
Seed ortholog evalue2.5e-60
Seed eggNOG ortholog2880.D7FI85
KEGG koko:K14570
KEGG Pathwayko03008,map03008
EggNOG free text desc.exonuclease activity
EggNOG OGsCOG0847@1,KOG2248@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009
Hectar predicted targeting categoryother localisation
Exons4
Model size703
Cds size702
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15443.3580.1prot_H-elongata_contig15443.3580.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig15443 1..3258 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929911.7836883-CDS-H-elongata_contig15443:0..2461622929911.7836883-CDS-H-elongata_contig15443:0..246Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15443 1..246 +
1691679205.527893-CDS-H-elongata_contig15443:0..2461691679205.527893-CDS-H-elongata_contig15443:0..246Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15443 1..246 +
1622929911.8076296-CDS-H-elongata_contig15443:1085..12381622929911.8076296-CDS-H-elongata_contig15443:1085..1238Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15443 1086..1238 +
1691679205.5401514-CDS-H-elongata_contig15443:1085..12381691679205.5401514-CDS-H-elongata_contig15443:1085..1238Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15443 1086..1238 +
1622929911.825028-CDS-H-elongata_contig15443:1765..19441622929911.825028-CDS-H-elongata_contig15443:1765..1944Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15443 1766..1944 +
1691679205.5500429-CDS-H-elongata_contig15443:1765..19441691679205.5500429-CDS-H-elongata_contig15443:1765..1944Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15443 1766..1944 +
1622929911.859852-CDS-H-elongata_contig15443:3134..32581622929911.859852-CDS-H-elongata_contig15443:3134..3258Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15443 3135..3258 +
1691679205.5592675-CDS-H-elongata_contig15443:3134..32581691679205.5592675-CDS-H-elongata_contig15443:3134..3258Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15443 3135..3258 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig15443.3580.1

>prot_H-elongata_contig15443.3580.1 ID=prot_H-elongata_contig15443.3580.1|Name=mRNA_H-elongata_contig15443.3580.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=234bp
EAVNTRLTRKRGRSETPSEGQAIPGPSGGLLDGLPISPFPTTAETAASTE
KDNIRVVCQGGLEDERAAKPQEVPHTRADCWQELVERTRAHPKYADHYTF
KADATWVKASPCGDACDSLPQVVAVDCEMCISKDPVTKECNSGELLRMSI
VRGEDGKKLIDTLVRPANPVIDWVTKIHGVGSQQMTGVQFTLSRHAQAAM
RRICCERTVIIGHALFNDLKALKARKAYFSLIYF
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mRNA from alignment at H-elongata_contig15443:1..3259+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig15443.3580.1 ID=mRNA_H-elongata_contig15443.3580.1|Name=mRNA_H-elongata_contig15443.3580.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3259bp|location=Sequence derived from alignment at H-elongata_contig15443:1..3259+ (Himanthalia elongata Himel1 dioecious)
GAGGCAGTAAACACTCGGCTGACGAGGAAGCGAGGGCGATCTGAGACCCC
GAGCGAGGGCCAAGCTATCCCCGGTCCTAGCGGTGGACTCCTCGACGGAC
TTCCCATCAGCCCGTTCCCGACGACAGCGGAGACAGCAGCATCCACAGAG
AAGGATAATATTCGTGTAGTGTGTCAAGGTGGGCTGGAGGACGAGAGGGC
GGCTAAGCCACAAGAGGTCCCCCATACCAGGGCAGACTGCTGGCAGGTGA
GAAAAAAAAATCGCGCGCGATCCGAGGACAGCCGCGGGAAGCCTTTTTTG
CTTGAATAAGCTACCTGGTCTTTCTAGAGCGCAGAGCTAAGACAGCTGAT
GTGCGTGCTGTAACTCCCAAATAATAAGACGATGAAAATGGGGGCGCGAT
CGATTACTTTTATGAAAATCACTTGAAACCGAAAGTATGAAGGTATAGGC
TCTAGTCGTTTGTAGATGAAACTCATCCCTTTCTCGTGACGCGCAGTGGT
TGAATGTTTGATCATGATTCGGACACACACACACACACACACAAACACCA
GGGGTGGGAAGCGAGGGGCAGGATCGGGGAGGGGAGAGGAGAGGAGAGTT
GAAGGAGCGCAAGACATGGAAAACGGGGGAGATTTGGGTAGCAGTAGAAA
AAAAGTAGACGCGAGAGCGTTGGTCCAATAGGGGTCGACCGAAGCCTAAA
TGGCGAACAAGGTAGAAAAGGAAGCGCAAGGTATTGCTGGTTTAGATACT
ACGAAATGTAGAGACTTGTCACGTCTGATCAGAGATCTGTAGCAAACATG
ATTGAATCCCCTATTGGGAGGATCAATGCGAGAGTAGCCTAGAAGGACTA
GCATGACAGGGCCGGATTGCGCGGTTATGTGCAATTTAGTAAATACACAC
ATGACGGCACATCGTCTAAACAGAACTCTTTCTTCCTTCTTTCTTTCCTT
CTGCTAATAAACTCACCACATTGTACTTACTGACTTGTTACCTCATTGAT
CTCGCCGCCACTCGCATCTTCTCTGTATTACACCCACCGCCCGATCGTTT
TTATCGCGTTACGGCCCCATCACCTTACGCCGCAGGAACTGGTCGAGCGC
ACGCGCGCGCACCCCAAATACGCGGATCACTACACTTTTAAGGCCGACGC
AACGTGGGTCAAGGCATCCCCCTGTGGGGACGCCTGTGACAGCCTCCCGC
AGGTGGTGGCGGTGGACTGCGAGATGTGCATAAGCAAGGTGCGTCTGTCG
CCCCCTTAAGGCGATCGCCCAACCGTTCACTCTAACGGTATATTTTTCCT
CCAACTCTCTCGAGTTTCTTCGCTGCTTCTTTCTCTGTCGAAAAAGTATG
TTTTTTCTTCTTTTTTGTTGATTTTTTTTTTTTCGAATTCCCAAAAGTAC
ACAAGCTGCTGTCAAAGTACAGCCCGTGGTCACATAGTAGAAATATAAGA
AACTGTTAATATATTTCAGTACCGTATATCTCAGTTTTGGACTCTCTCTC
TCAGTCTCATTTTTTGTGTCTTTATCCTACTAATAGTGTGTGAGTTTGTG
TACCCTGAGGCTTGTGTCGCCGGGGGATGGGGAAGCAAGGGATAGGGTTG
AGAGCAGCATCTTCCGGGATGAGCCTTGGACTCGTTCATTACAAGGTGTC
CCCTCTCTTATATCCTAACCCGACCTGTCCCCCCACCCAAAAAAAATAGA
AACATGACGTGTGTATCCGTAGGCGTGAAACACACTTGCTCCTCAATTAT
CCCGCCCCTCTTCAGGACCCAGTGACCAAAGAGTGCAACAGTGGGGAACT
GTTGAGGATGAGCATCGTCAGGGGAGAGGACGGCAAGAAGCTTATAGACA
CGCTAGTGCGCCCCGCCAATCCCGTGATAGACTGGGTCACCAAAATCCAT
GGCGTGGGTTCGCAACAGATGACCGGCGTGCAGTTCACTCTCAGGTGATA
CTCTCGTGGAATAGTTAATTTTTAAAAGCCATATATAAACTCATTGAAAA
CCTCCGAGCATTCACGCCTTCTTAGCACCGTGAAAGGTACAGTCCAGGGG
ACCAACTATCGTCAGATTACTTCAACAATGTGCACTTACTGAGGTGGTCA
CAAGTGCGTAGGAAAATATTGCGTTGATTTTGTTTTCTAAGTTTTCTGTC
TCCGTTGGATTGTACCGTTTCCGTTTTCCTCTCGAGTTTTCCCTTTGTTA
CAGAATCATTCCACAAGAACAGTATGGTCTTTTTTGCTGGTTTTTTATTT
TCTCCAAACCGGCATACACCACGAACCCAAACAGTGCCGGGACGGAAAGA
CATGTCTGGTTTTAGTCATCATCCCCGCGTTTTCTACGCCAACCCGGATA
TAGTAACCAAATGGTGCACATCAAGTAGGCGTTATCATTATATACTACAC
TATATTGTACACCTACACTAAGCTCCACCGGGTCTAGTAGCCAAATGGTG
CACATTCAGCGGAACCATATTATACCCAACTATTGTATGGGTTAATTGGA
CACACCGGGGAACCAAATTGTGTCCAATCAGCGAGGGCGTTATATACTAT
ACTCCAAGTAATGCGAAGGGACTTTGGTCTCCGCGCGAACGCATAAGCAC
CGCACGCACGACATACTTGGTACACAACGGTATACGGTATACGATACACT
CTAACGAGTATATAATCTGCTCATGAAAACTCCTGAAGGAGTACTCTCAA
AAACCTATCCTTGCTAAAGGCTCTCCAACAAATCAATTATTTAGCAGGCA
TCCTGTGTAGTCGTCACATATAGCGAGTATGGATCAACCGGATTTGGTTG
CCTCCTGCTCGTGGTCAGCTGAACAGGAAAAACACTGCTGATTCGTTTTC
AGAAAAAGAAAAAAATCTTCGGCCGAGGTTTCTGGACTCTCACAGGATAC
GCTACATGAACTCCCTCATGCCCTCCAAGTTGCAGCTTTTACGGGTCCAT
GCCACAAGAGCAAACCCGGTGTACTTATGCTAAAACTGAATTTCAAGTTT
TATATTGAATTTAGTTTGTACAAAACAGGTATAGGTTTACCTTGGATCGC
TATATCACTTGGGCGTCATACTCCCCCTCGCTCCCCGCTGCATCGGCTCG
GTGCATTTGCTTCTCGCTTTTTGGGGTGCATGAGCAGGCACGCGCAGGCA
GCGATGAGGCGGATATGTTGCGAGCGTACCGTGATCATCGGACACGCCCT
CTTCAACGACCTCAAAGCGCTTAAGGCGAGAAAGGCCTATTTTTCTTTGA
TTTATTTTA
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Coding sequence (CDS) from alignment at H-elongata_contig15443:1..3259+

>mRNA_H-elongata_contig15443.3580.1 ID=mRNA_H-elongata_contig15443.3580.1|Name=mRNA_H-elongata_contig15443.3580.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1404bp|location=Sequence derived from alignment at H-elongata_contig15443:1..3259+ (Himanthalia elongata Himel1 dioecious)
GAGGCAGTAAACACTCGGCTGACGAGGAAGCGAGGGCGATCTGAGACCCC
GAGCGAGGGCCAAGCTATCCCCGGTCCTAGCGGTGGACTCCTCGACGGAC
TTCCCATCAGCCCGTTCCCGACGACAGCGGAGACAGCAGCATCCACAGAG
AAGGATAATATTCGTGTAGTGTGTCAAGGTGGGCTGGAGGACGAGAGGGC
GGCTAAGCCACAAGAGGTCCCCCATACCAGGGCAGACTGCTGGCAGGAGG
CAGTAAACACTCGGCTGACGAGGAAGCGAGGGCGATCTGAGACCCCGAGC
GAGGGCCAAGCTATCCCCGGTCCTAGCGGTGGACTCCTCGACGGACTTCC
CATCAGCCCGTTCCCGACGACAGCGGAGACAGCAGCATCCACAGAGAAGG
ATAATATTCGTGTAGTGTGTCAAGGTGGGCTGGAGGACGAGAGGGCGGCT
AAGCCACAAGAGGTCCCCCATACCAGGGCAGACTGCTGGCAGGAACTGGT
CGAGCGCACGCGCGCGCACCCCAAATACGCGGATCACTACACTTTTAAGG
CCGACGCAACGTGGGTCAAGGCATCCCCCTGTGGGGACGCCTGTGACAGC
CTCCCGCAGGTGGTGGCGGTGGACTGCGAGATGTGCATAAGCAAGGAACT
GGTCGAGCGCACGCGCGCGCACCCCAAATACGCGGATCACTACACTTTTA
AGGCCGACGCAACGTGGGTCAAGGCATCCCCCTGTGGGGACGCCTGTGAC
AGCCTCCCGCAGGTGGTGGCGGTGGACTGCGAGATGTGCATAAGCAAGGA
CCCAGTGACCAAAGAGTGCAACAGTGGGGAACTGTTGAGGATGAGCATCG
TCAGGGGAGAGGACGGCAAGAAGCTTATAGACACGCTAGTGCGCCCCGCC
AATCCCGTGATAGACTGGGTCACCAAAATCCATGGCGTGGGTTCGCAACA
GATGACCGGCGTGCAGTTCACTCTCAGGACCCAGTGACCAAAGAGTGCAA
CAGTGGGGAACTGTTGAGGATGAGCATCGTCAGGGGAGAGGACGGCAAGA
AGCTTATAGACACGCTAGTGCGCCCCGCCAATCCCGTGATAGACTGGGTC
ACCAAAATCCATGGCGTGGGTTCGCAACAGATGACCGGCGTGCAGTTCAC
TCTCAGCAGGCACGCGCAGGCAGCGATGAGGCGGATATGTTGCGAGCGTA
CCGTGATCATCGGACACGCCCTCTTCAACGACCTCAAAGCGCTTAAGGCG
AGAAAGGCCTATTTTTCTTTGATTTATTTTCAGGCACGCGCAGGCAGCGA
TGAGGCGGATATGTTGCGAGCGTACCGTGATCATCGGACACGCCCTCTTC
AACGACCTCAAAGCGCTTAAGGCGAGAAAGGCCTATTTTTCTTTGATTTA
TTTT
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