prot_H-elongata_contig154414.3579.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig154414.3579.1
Unique Nameprot_H-elongata_contig154414.3579.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length167
Homology
BLAST of mRNA_H-elongata_contig154414.3579.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 4.650e-31
Identity = 72/174 (41.38%), Postives = 106/174 (60.92%), Query Frame = 0
Query:    6 IECISARLLKARISIKSKC-VTFVVAYTPTE--EATKG----EKAKYIAALNSTVSSLPTREYVFIL--------GKGGGDAESKVLGAYGQDVLNQNGKLLLSFSEDNKLALLNTYFSTPKNDASYTSQSANHGKGQGRMDYIIIKQVDRRLVRSVNFRPVPLGGPKSDHNFV 164
            +ECIS RL+K R+ I   C VTFVV Y PTE    T G     K  +  AL++ +  + +R+++ +L         + GG  ++KVLGAYG+D++N NG+ L   + DN+ +L NTYF TPK    +T QS+N GK + R+D+I+++Q DRR VR+V+ + V      SDHN V
Sbjct:   72 VECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRGGCCDAKVLGAYGRDIMNNNGERLFGLASDNQFSLANTYFRTPKGGVQHTFQSSNKGKEKYRLDFILMRQADRRFVRNVSVKRVDF--KDSDHNLV 243          
BLAST of mRNA_H-elongata_contig154414.3579.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 1.240e-30
Identity = 72/176 (40.91%), Postives = 110/176 (62.50%), Query Frame = 0
Query:    6 IECISARLLKARISIKSKC-VTFVVAYTPTEEA--TKG----EKAKYIAALNSTVSSLPTREYVFIL--------GKGGGDAESKVLGAYGQDVLNQNGKLLLSFSEDNKLALLNTYFSTPKNDASYTSQSANHGKGQGRMDYIIIKQVDRRLVRSVNFRPVPLGGPKSDHNFVYA 166
            +ECIS RL+K R+ I   C VTFVV Y PTE A  T G     K  +  AL++ +  + +R+++ +L         +  G  ++K++GAYG+D++N NG+ LL  + DN+L+L+NTYF TPK    +T QS+N GK + R+D+I+++Q DRRLVR+ + + V      SDHN V+ 
Sbjct:   72 VECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHRLDFILMRQTDRRLVRNASVKRVDF--KDSDHNLVHT 245          
BLAST of mRNA_H-elongata_contig154414.3579.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 1.250e-30
Identity = 72/176 (40.91%), Postives = 110/176 (62.50%), Query Frame = 0
Query:    6 IECISARLLKARISIKSKC-VTFVVAYTPTEEA--TKG----EKAKYIAALNSTVSSLPTREYVFIL--------GKGGGDAESKVLGAYGQDVLNQNGKLLLSFSEDNKLALLNTYFSTPKNDASYTSQSANHGKGQGRMDYIIIKQVDRRLVRSVNFRPVPLGGPKSDHNFVYA 166
            +ECIS RL+K R+ I   C VTFVV Y PTE A  T G     K  +  AL++ +  + +R+++ +L         +  G  ++K++GAYG+D++N NG+ LL  + DN+L+L+NTYF TPK    +T QS+N GK + R+D+I+++Q DRRLVR+ + + V      SDHN V+ 
Sbjct:  184 VECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHRLDFILMRQTDRRLVRNASVKRVDF--KDSDHNLVHT 357          
BLAST of mRNA_H-elongata_contig154414.3579.1 vs. uniprot
Match: A0A6H5KL25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL25_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 2.590e-30
Identity = 71/176 (40.34%), Postives = 110/176 (62.50%), Query Frame = 0
Query:    6 IECISARLLKARISIKSKC-VTFVVAYTPTEEA--TKG----EKAKYIAALNSTVSSLPTREYVFIL--------GKGGGDAESKVLGAYGQDVLNQNGKLLLSFSEDNKLALLNTYFSTPKNDASYTSQSANHGKGQGRMDYIIIKQVDRRLVRSVNFRPVPLGGPKSDHNFVYA 166
            +ECIS RL+K R+ I   C VTFVV Y PTE A  T G     K  +  AL++ +  + +R+++ +L         +  G  ++K++GAYG+D++N NG+ LL  + DN+L+L+NTYF TPK    +T QS+N GK + R+D+I+++Q DRR VR+V+ + V      +DHN V+ 
Sbjct:   12 VECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKYRLDFILMRQTDRRFVRNVSVKSVAF--KDADHNLVHT 185          
BLAST of mRNA_H-elongata_contig154414.3579.1 vs. uniprot
Match: A0A6H5KDI8_9PHAE (Reverse transcriptase domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDI8_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 8.060e-30
Identity = 71/176 (40.34%), Postives = 109/176 (61.93%), Query Frame = 0
Query:    6 IECISARLLKARISIKSKC-VTFVVAYTPTEEA--TKG----EKAKYIAALNSTVSSLPTREYVFIL--------GKGGGDAESKVLGAYGQDVLNQNGKLLLSFSEDNKLALLNTYFSTPKNDASYTSQSANHGKGQGRMDYIIIKQVDRRLVRSVNFRPVPLGGPKSDHNFVYA 166
            +ECIS RL+K R+ I   C VTFVV Y PTE A  T G     K  +  AL++ +  + +R+++ +L         +  G  ++K++GAYG+D++N NG+ LL  + DN+L+L+NTYF TPK    +T QS+N GK + R+D+I+++Q DRRL R+ + + V      SDHN V+ 
Sbjct:  305 VECISPRLMKVRLQIGRTCGVTFVVGYAPTETARNTAGGDVNAKDSFWTALDAEIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHRLDFILMRQTDRRLERNASVKRVDF--KDSDHNLVHT 478          
BLAST of mRNA_H-elongata_contig154414.3579.1 vs. uniprot
Match: A0A6H5KSV0_9PHAE (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV0_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 8.160e-30
Identity = 71/174 (40.80%), Postives = 107/174 (61.49%), Query Frame = 0
Query:    6 IECISARLLKARISIKSKC-VTFVVAYTPTE--EATKG----EKAKYIAALNSTVSSLPTREYVFIL--------GKGGGDAESKVLGAYGQDVLNQNGKLLLSFSEDNKLALLNTYFSTPKNDASYTSQSANHGKGQGRMDYIIIKQVDRRLVRSVNFRPVPLGGPKSDHNFV 164
            +ECIS RL+K R+ I   C VTFV+ Y PTE    T G     K  +  AL++ +  + +R+++ +L         +  G  ++K++GAYG+D++N NG+ LL  + DN+L+L NTYF TPK  A +T QS+N GK + R+D+I+++Q DRR VR V+ + V      SDHN V
Sbjct:   72 VECISPRLMKVRLQIGRTCGVTFVMGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGAQHTFQSSNTGKEKYRLDFILMRQTDRRFVRDVSVKRVDF--KDSDHNLV 243          
BLAST of mRNA_H-elongata_contig154414.3579.1 vs. uniprot
Match: A0A6H5L7A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A7_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 1.940e-29
Identity = 71/174 (40.80%), Postives = 107/174 (61.49%), Query Frame = 0
Query:    6 IECISARLLKARISIKSKC-VTFVVAYTPTE--EATKG----EKAKYIAALNSTVSSLPTREYVFIL--------GKGGGDAESKVLGAYGQDVLNQNGKLLLSFSEDNKLALLNTYFSTPKNDASYTSQSANHGKGQGRMDYIIIKQVDRRLVRSVNFRPVPLGGPKSDHNFV 164
            +ECIS RL+K R+ I   C VTFVV Y PTE    T G     K  +  AL++ +  + +R+++ +L         +  G  ++K++GAYG+D++N NG+ LL  + DN+L+L NTYF TPK    +T QS+N GK + R+D+I+++Q DRR VR+V+ + V      SDHN V
Sbjct:   72 VECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYRLDFILMRQTDRRFVRNVSVKRVDF--KDSDHNLV 243          
BLAST of mRNA_H-elongata_contig154414.3579.1 vs. uniprot
Match: A0A6H5K358_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K358_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 2.620e-29
Identity = 69/174 (39.66%), Postives = 105/174 (60.34%), Query Frame = 0
Query:    6 IECISARLLKARISIKSKC-VTFVVAYTPTEEATK------GEKAKYIAALNSTVSSLPTREYVFIL--------GKGGGDAESKVLGAYGQDVLNQNGKLLLSFSEDNKLALLNTYFSTPKNDASYTSQSANHGKGQGRMDYIIIKQVDRRLVRSVNFRPVPLGGPKSDHNFV 164
            +ECIS RL+K R+ I   C VTFVV Y PTE            K  +  AL++ +  + +R+++ +L         +  G  ++K++GAYG+D++N NG+ LL  + DN+L+L NTYF TPK    +T QS+N GK + R+D+I+++Q DRR VR+V+ + V      SDHN V
Sbjct:  167 VECISPRLMKVRLQIGRTCGVTFVVGYAPTETVRTTACGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYRLDFILMRQADRRFVRNVSVKRVDF--KDSDHNLV 338          
BLAST of mRNA_H-elongata_contig154414.3579.1 vs. uniprot
Match: A0A6H5K1H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H7_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 2.720e-29
Identity = 71/174 (40.80%), Postives = 107/174 (61.49%), Query Frame = 0
Query:    6 IECISARLLKARISIKSKC-VTFVVAYTPTE--EATKG----EKAKYIAALNSTVSSLPTREYVFIL--------GKGGGDAESKVLGAYGQDVLNQNGKLLLSFSEDNKLALLNTYFSTPKNDASYTSQSANHGKGQGRMDYIIIKQVDRRLVRSVNFRPVPLGGPKSDHNFV 164
            +ECIS RL+K R+ I   C VTFVV Y PTE    T G     K  +  AL++ +  + +R+++ +L         +  G  ++K++GAYG+D++N NG+ LL  + DN+L+L NTYF TPK    +T QS+N GK + R+D+I+++Q DRR VR+V+ + V      SDHN V
Sbjct:  751 VECISPRLMKVRLQIGRTCGVTFVVRYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYRLDFILMRQADRRFVRNVSVKRVDF--KDSDHNLV 922          
BLAST of mRNA_H-elongata_contig154414.3579.1 vs. uniprot
Match: A0A6H5JQ12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ12_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 4.930e-29
Identity = 67/172 (38.95%), Postives = 105/172 (61.05%), Query Frame = 0
Query:    6 IECISARLLKARISIKSKC-VTFVVAYTPTE--EATKG----EKAKYIAALNSTVSSLPTREYVFIL--------GKGGGDAESKVLGAYGQDVLNQNGKLLLSFSEDNKLALLNTYFSTPKNDASYTSQSANHGKGQGRMDYIIIKQVDRRLVRSVNFRPVPLGGPKSDHN 162
            +ECIS R++K R+ I   C V FVV Y PTE    T G     K  +  AL++ +  + +R+++ +L         +  G  ++K++GAYG+D++N NG+ LL  + DN+L+L NTYF TPK    +T QS+N GK + R+D+I+++Q DRR VR+++ + V      SDHN
Sbjct:   12 VECISPRMMKVRLQIGRTCGVNFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAIREVHSRDHLVVLMDANARTGRRRDGCCDAKIMGAYGRDIMNNNGERLLGLASDNQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYRLDFILMRQTDRRFVRNISVKRVDF--KDSDHN 181          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig154414.3579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBZ6_9PHAE4.650e-3141.38Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KC90_9PHAE1.240e-3040.91Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JQH5_9PHAE1.250e-3040.91Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KL25_9PHAE2.590e-3040.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDI8_9PHAE8.060e-3040.34Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KSV0_9PHAE8.160e-3040.80Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5L7A7_9PHAE1.940e-2940.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K358_9PHAE2.620e-2939.66Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K1H7_9PHAE2.720e-2940.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQ12_9PHAE4.930e-2938.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10coord: 3..166
e-value: 1.4E-11
score: 46.3
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 9..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig154414contigH-elongata_contig154414:228..728 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig154414.3579.1mRNA_H-elongata_contig154414.3579.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig154414 228..728 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig154414.3579.1 ID=prot_H-elongata_contig154414.3579.1|Name=mRNA_H-elongata_contig154414.3579.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=167bp
KDDIAIECISARLLKARISIKSKCVTFVVAYTPTEEATKGEKAKYIAALN
STVSSLPTREYVFILGKGGGDAESKVLGAYGQDVLNQNGKLLLSFSEDNK
LALLNTYFSTPKNDASYTSQSANHGKGQGRMDYIIIKQVDRRLVRSVNFR
PVPLGGPKSDHNFVYA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf