prot_H-elongata_contig154397.3578.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig154397.3578.1
Unique Nameprot_H-elongata_contig154397.3578.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length61
Homology
BLAST of mRNA_H-elongata_contig154397.3578.1 vs. uniprot
Match: A0A7S1D9A9_CYCTE (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D9A9_CYCTE)

HSP 1 Score: 124 bits (312), Expect = 2.440e-33
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 0
Query:    1 MNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPLTIIGAGGTAPNQALGAEHSQ 61
            MNGYRPIVELMNTNFGIYGMAE+SSAGNTYATTGGQFDMPLTIIGAGGTAPNQALGAEHSQ
Sbjct:   60 MNGYRPIVELMNTNFGIYGMAEISSAGNTYATTGGQFDMPLTIIGAGGTAPNQALGAEHSQ 120          
BLAST of mRNA_H-elongata_contig154397.3578.1 vs. uniprot
Match: A0A7S1USZ6_9STRA (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1USZ6_9STRA)

HSP 1 Score: 124 bits (311), Expect = 3.010e-32
Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 0
Query:    1 MNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPLTIIGAGGTAPNQALGAEHSQ 61
            MNGYRP+VELMNTNFGIYGMAELSSAGNTYATTGGQFDMP+TIIGAGGTAPNQALGAEHSQ
Sbjct:  201 MNGYRPVVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPMTIIGAGGTAPNQALGAEHSQ 261          
BLAST of mRNA_H-elongata_contig154397.3578.1 vs. uniprot
Match: B8C5P9_THAPS (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5P9_THAPS)

HSP 1 Score: 121 bits (303), Expect = 4.690e-32
Identity = 57/61 (93.44%), Postives = 61/61 (100.00%), Query Frame = 0
Query:    1 MNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPLTIIGAGGTAPNQALGAEHSQ 61
            MNGYRPIVELMNTNFGI+GMAELSSAGNT+ATTGGQFDMP+TI+GAGGTAPNQALGAEHSQ
Sbjct:   54 MNGYRPIVELMNTNFGIFGMAELSSAGNTFATTGGQFDMPMTIVGAGGTAPNQALGAEHSQ 114          
BLAST of mRNA_H-elongata_contig154397.3578.1 vs. uniprot
Match: A0A7S2U5Q1_9STRA (Pyruvate dehydrogenase (acetyl-transferring) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U5Q1_9STRA)

HSP 1 Score: 124 bits (312), Expect = 8.830e-32
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 0
Query:    1 MNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPLTIIGAGGTAPNQALGAEHSQ 61
            MNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMP+TIIGAGGTAPNQALGAEHSQ
Sbjct:  583 MNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPMTIIGAGGTAPNQALGAEHSQ 643          
BLAST of mRNA_H-elongata_contig154397.3578.1 vs. uniprot
Match: D8LEK3_ECTSI (Pyruvate dehydrogenase (acetyl-transferring) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEK3_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 2.230e-31
Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 0
Query:    1 MNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPLTIIGAGGTAPNQALGAEHSQ 61
            MNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMP+TIIGAGGTAPNQ+LGAEHSQ
Sbjct:  543 MNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPMTIIGAGGTAPNQSLGAEHSQ 603          
BLAST of mRNA_H-elongata_contig154397.3578.1 vs. uniprot
Match: A0A7S2KDP0_9STRA (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KDP0_9STRA)

HSP 1 Score: 121 bits (303), Expect = 3.050e-31
Identity = 57/61 (93.44%), Postives = 61/61 (100.00%), Query Frame = 0
Query:    1 MNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPLTIIGAGGTAPNQALGAEHSQ 61
            MNGYRPIVELMNTNFGIYGMAE+SSAGNT+ATTGGQFDMP+TIIGAGGTAPNQ+LGAEHSQ
Sbjct:  172 MNGYRPIVELMNTNFGIYGMAEISSAGNTFATTGGQFDMPMTIIGAGGTAPNQSLGAEHSQ 232          
BLAST of mRNA_H-elongata_contig154397.3578.1 vs. uniprot
Match: A0A7S4UV86_9STRA (Pyruvate dehydrogenase (acetyl-transferring) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UV86_9STRA)

HSP 1 Score: 123 bits (308), Expect = 3.050e-31
Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 0
Query:    1 MNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPLTIIGAGGTAPNQALGAEHSQ 61
            MNGYRPIVELMNTNFGIYGMAELSSAGNT+ATTGGQFDMP+TIIGAGGTAPNQALGAEHSQ
Sbjct:  553 MNGYRPIVELMNTNFGIYGMAELSSAGNTFATTGGQFDMPMTIIGAGGTAPNQALGAEHSQ 613          
BLAST of mRNA_H-elongata_contig154397.3578.1 vs. uniprot
Match: A0A7S2M045_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M045_9STRA)

HSP 1 Score: 122 bits (305), Expect = 3.580e-31
Identity = 57/61 (93.44%), Postives = 61/61 (100.00%), Query Frame = 0
Query:    1 MNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPLTIIGAGGTAPNQALGAEHSQ 61
            MNGYRPIVELMNTNFGI+GMAE+SSAGNTYATTGGQFDMP+TI+GAGGTAPNQALGAEHSQ
Sbjct:  433 MNGYRPIVELMNTNFGIFGMAEISSAGNTYATTGGQFDMPMTIVGAGGTAPNQALGAEHSQ 493          
BLAST of mRNA_H-elongata_contig154397.3578.1 vs. uniprot
Match: F0YJF4_AURAN (Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJF4_AURAN)

HSP 1 Score: 119 bits (298), Expect = 4.030e-31
Identity = 56/61 (91.80%), Postives = 59/61 (96.72%), Query Frame = 0
Query:    1 MNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPLTIIGAGGTAPNQALGAEHSQ 61
            MNGYRPIVELMN NFGIYGMAELSSAGNTYATTGGQF MP+T++GAGGTAPNQALGAEHSQ
Sbjct:   78 MNGYRPIVELMNANFGIYGMAELSSAGNTYATTGGQFKMPMTVVGAGGTAPNQALGAEHSQ 138          
BLAST of mRNA_H-elongata_contig154397.3578.1 vs. uniprot
Match: A0A1Z5JCB7_FISSO (Pyruvate dehydrogenase (acetyl-transferring) n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JCB7_FISSO)

HSP 1 Score: 122 bits (307), Expect = 4.160e-31
Identity = 58/61 (95.08%), Postives = 61/61 (100.00%), Query Frame = 0
Query:    1 MNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPLTIIGAGGTAPNQALGAEHSQ 61
            +NGYRPIVELMNTNFGIYGMAE+SSAGNTYATTGGQFDMP+TIIGAGGTAPNQALGAEHSQ
Sbjct:  547 LNGYRPIVELMNTNFGIYGMAEISSAGNTYATTGGQFDMPMTIIGAGGTAPNQALGAEHSQ 607          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig154397.3578.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1D9A9_CYCTE2.440e-3398.36Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A7S1USZ6_9STRA3.010e-3296.72Pyruvate dehydrogenase E1 component subunit beta n... [more]
B8C5P9_THAPS4.690e-3293.44Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A7S2U5Q1_9STRA8.830e-3298.36Pyruvate dehydrogenase (acetyl-transferring) n=1 T... [more]
D8LEK3_ECTSI2.230e-3196.72Pyruvate dehydrogenase (acetyl-transferring) n=2 T... [more]
A0A7S2KDP0_9STRA3.050e-3193.44Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A7S4UV86_9STRA3.050e-3196.72Pyruvate dehydrogenase (acetyl-transferring) n=2 T... [more]
A0A7S2M045_9STRA3.580e-3193.44Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
F0YJF4_AURAN4.030e-3191.80Pyruvate dehydrogenase E1 component subunit beta n... [more]
A0A1Z5JCB7_FISSO4.160e-3195.08Pyruvate dehydrogenase (acetyl-transferring) n=2 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.970coord: 1..61
e-value: 2.4E-8
score: 35.3
NoneNo IPR availablePANTHERPTHR11624:SF96PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT BETA-2, CHLOROPLASTIC-RELATEDcoord: 1..61
IPR027110Pyruvate dehydrogenase E1 component subunit betaPANTHERPTHR11624DEHYDROGENASE RELATEDcoord: 1..61
IPR029061Thiamin diphosphate-binding foldSUPERFAMILY52518Thiamin diphosphate-binding fold (THDP-binding)coord: 1..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig154397contigH-elongata_contig154397:588..770 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig154397.3578.1mRNA_H-elongata_contig154397.3578.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig154397 588..788 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig154397.3578.1 ID=prot_H-elongata_contig154397.3578.1|Name=mRNA_H-elongata_contig154397.3578.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=61bp
MNGYRPIVELMNTNFGIYGMAELSSAGNTYATTGGQFDMPLTIIGAGGTA
PNQALGAEHSQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027110PDHB
IPR029061THDP-binding