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Homology
BLAST of mRNA_H-elongata_contig15439.3577.1 vs. uniprot
Match: D7FVY3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVY3_ECTSI) HSP 1 Score: 293 bits (751), Expect = 3.840e-78 Identity = 339/901 (37.62%), Postives = 410/901 (45.50%), Query Frame = 3
Query: 945 GNGELLTHPQSCRRGNIS-SENHSCISCKTVLELGTGKRGIEKLKEEG------ARGPARVETLFRLMHGPETSSTGDIP----------RDGVAKEGERXXXXXXXXXXXVDCSICMCAVTGEPDAASLDKCVHAFHFDCITKWGETTNQCPMCKARFNTVTRLRDAHVKRFRGSRRXXXXXXXXXXXXXXX-----------PVAARAVCLHCGDGGSEDRLMLCDGSGCGNGAHTFCCGLEEVPSGEWFCPDCQTRHEAVTRRREANARQNAILARAWEPDSDSDAEEHDAPLGGGLEEEEENVSIGTERTRRGRVMDDDRVDAFERGLVN------------------------SSGESNSDGDDNETEEYSVMGDVEEVSDPIDLVSSGHSEXXXXXXXXXXXVFIASRGPTRQRGGRQRXXXXQDTRGDHG----GDSVVVARSHSSSESR------SAAGPRRVRSRLGLIATLTRGQRRGRXXXXRGRWRTGFGGPPGSLFGSSAAAGP------GPNLWPRVLASATSVLTPLHDFADVG-GEE--GEEKEGEMRDGGDNLVTQSWADAERARQVCNVRRSVGEILKRRYACAAPSTGTTALSSPTDRRIFKRPRMISPLAK-GSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRIFNRNRMIHASATGSLSSSPPSRSPLSPSILPGMRRIDSSRGRGAAMDGIASGRGSGSSSGSTDLRPNAAVADVRRLGKSEVQALVRRLRRVAIYLKERHTERFNGWL--GLTGLSGDELEGEGNVNALLE------ELRRLTLNGDSATLDALISAQLLAALRLCLEPAGDGRMPIMSAPQRLSLLKVLMALPVQKAHLKESGVGKLVMAMAADPSETQENRELIKQ 3407
G+G +P S RG+ S + + + + ++ + G+E++ + A G V + R M E S TG +G EGE DCSICMC VTG+ D ASLDKCVHAFHF CI KWGETTNQCPMCK+RF +TRLRD HVKRFRGSRR P ARAVCLHC DGG+E++LMLCDG GC N AHTFCCGLEEVP+G+WFCP CQ R E RRREA++R++AIL R W DS S+AE ++G E G+V S ++ + G S XXXXXXXXXXX XXXX R G G S S +S E+R S G R V G XXXX G G S + PN WPRVLASATS +TP H FAD G+E E E G +V QSWADA+ A+Q+ + + + P P R+ R + + A GS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T P A +DVR LG SEVQALV+RLRRVA+ +ER R GW G + +G G G+ +E ELRR+ ++GD+ TLD L+S+QL LRL LE A DG P + PQR SLLKVLM LPVQK+HL+ESG+GKLV+AMAADP ET++NRELIKQ
Sbjct: 499 GDGSGGANPSSATRGSESPNRDAATVGGDNLVRRAASRDGVERVGPDETAAAVTAAGEGAVHSEGRAMPLKEGSLTGGAAGANNDSCSKGNNGQDDEGEAE-----------DCSICMCPVTGDEDQASLDKCVHAFHFTCIVKWGETTNQCPMCKSRFYVITRLRDDHVKRFRGSRRRRPLDEGGLFAPNGHLGGLLIPEEPEPEGARAVCLHCQDGGAEEQLMLCDGPGCSNAAHTFCCGLEEVPAGDWFCPACQARREEEARRREADSRRDAILQRVWAVDSGSEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAVTAGAG--------AEAIDEGGEVRVSSGDLEAIGLGDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTAVGSGVEGSSRPRPHSSASPEARRRSSDGSEDGERLVSVLPGXXXXXXXXXXXXXXXXXXXXXXXXXXGAVGRSGRSHDGSXXXXXXXXAPNFWPRVLASATSAMTPRHVFADEEYGQELASSEDEAGPPAGATGVVAQSWADAKLAQQLAQGKNKKDKSKAPSTSKQPPRXXXXXXXXPQQRQQPVRGSVSNGQASVGSPVWNGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPRLP--AASDVR-LGHSEVQALVQRLRRVALKERER---RSRGWAVGGSSARTGVSEGGGGDPKVAVEVEQTMAELRRVAVHGDATTLDVLLSSQLPTVLRLWLEVAPDGG-PFLPPPQRASLLKVLMVLPVQKSHLRESGIGKLVVAMAADPGETRDNRELIKQ 1373
BLAST of mRNA_H-elongata_contig15439.3577.1 vs. uniprot
Match: A0A6H5L6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6K9_9PHAE) HSP 1 Score: 278 bits (712), Expect = 2.900e-73 Identity = 305/827 (36.88%), Postives = 366/827 (44.26%), Query Frame = 3
Query: 1230 DCSICMCAVTGEPDAASLDKCVHAFHFDCITKWGETTNQCPMCKARFNTVTRLRDAHVKRFRGSRRXXXXXXXXXXXXXXX-----------PVAARAVCLHCGDGGSEDRLMLCDGSGCGNGAHTFCCGLEEVPSGEWFCPDCQTRHEAVTRRREANARQNAILARAWEPDSDSDAEEHDAPLGGGLEEEEENVSIGTERTRRGRVMDDDRVDAFER------------------------GLVNSSGESNSDGDDNETEEYSVMGDVEEVSDPIDLVSSGHSEXXXXXXXXXXXVFIASRGPTRQRGGRQRXXXXQDTRGDHGGDSVVVARSHSSSESRSAAGPRRVRSRLGLIATLT---------------------RGQRRGRXXXXRGRWRTGFGGPPGSLFGSSAAAGPGPNLWPRVLASATSVLTPLHDFADVGGEEGEE-----KEGEMRDGGDNLVTQSWADAERARQVCNVRRSVGEILKRRYACAAPSTGTTALSSPTDRRIFKRPRMISPLAKGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRIFNRNRMIHASATGSLSSSPPSRSPLSPSILPGMRRIDSSRGRGAAMDGIASGRGSGSSSGSTDLRPNAAVADVRRLGKSEVQALVRRLRRVAIYLKERHTERFNGW-------LGLTGLSGDELEGEGNVNALLEELRRLTLNGDSATLDALISAQ---------------------------------LLAALRLCLEPAGDGRMPIMSAPQRLSLLKVLMALPVQKAHLKESGVGKLVMAMAADPSETQENRELIKQ 3407
DCSICMC VTG+ D ASLDKCVHAFHF CI KWG TTNQCPMCK+RF VTRLRD HVKRFRGSRR P ARAVCLHC DGG+E++LMLCDG GCGN AHTFCCGL EVP+G+WFCP CQ R E +RRREA++R++AIL R W DS SD E + E+ ++ D +E GD+E + SSG XXXXXXXXXXX XXXX +S E+R +G S L++ L+ GR R G GS++A PN WPRVLASATS +TP H FAD E+GEE E G +V QSWADA+ A+Q+ + + P T T + P ++ R + + A S XXXXXXXXXXXXXXXXXXXXXXXXXXX P A RLG EVQALV+RLRRVA+ +ER R GW +G++ G + V +EELRR+ ++GD+ TLD L+S+Q L LRL LE A DG P + PQR SLLKVLM LPVQK+HL+ESG+GKLV+AMAA P ET++NRELIKQ
Sbjct: 569 DCSICMCPVTGDEDQASLDKCVHAFHFTCIVKWGVTTNQCPMCKSRFYVVTRLRDDHVKRFRGSRRPRPLDEGGLFAPNGHLGGLLIPEEPEPEGARAVCLHCQDGGAEEQLMLCDGPGCGNAAHTFCCGLGEVPAGDWFCPACQARREEESRRREADSRRDAILQRVWAVDSGSDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITTAATAEAGAEAIAEAIDEGSEVRESSGDLEAIGLGY---SSGSLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGSASPEARRRSGDGSEDSER-LVSVLSGXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGRSGRRRDGS--------GSASAGAAAPNFWPRVLASATSAMTPRHVFADE--EDGEELASSEDEAGPPAGATGVVAQSWADAKLAQQLAQGTNKKKKGKAPSTSKQPPRTAMTTRTQPQQQQQPVRGSVSNGQASPGSPVWNGGAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPRLPAASDVRLGHLEVQALVQRLRRVALKERER---RSRGWAVGGSARMGVSEGGGGYPKVPSEVEQTIEELRRVAVHGDATTLDVLLSSQVGVSRRLNRLDASGSPALKLAVFGGGGCWWPSQLPTVLRLWLEVAPDGG-PFLPPPQRASLLKVLMVLPVQKSHLRESGIGKLVVAMAAGPGETRDNRELIKQ 1377
BLAST of mRNA_H-elongata_contig15439.3577.1 vs. uniprot
Match: A0A7S1XTZ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XTZ1_9STRA) HSP 1 Score: 135 bits (339), Expect = 4.720e-30 Identity = 86/198 (43.43%), Postives = 113/198 (57.07%), Query Frame = 1
Query: 4 TACRFRRSGACQFTAVADQLFRSRPVTEAFRPDIYLRLLALHCVSQNQDAFQDFMLHAAPITRQQRQRGGEGVDMKEYARQMASSRCDGDHITLQALCDALKVNINVVKWTRDNQRPPSPLAVSGAAETAAAHAKTS*PAIADLTMRPRRSVFV-ADTLRPREEAMRLDSRARDVQLRGRTLWLSLQG-EAHFRSLRL 591
T R SG CQF+++ADQLF P FRPD++LR LAL + + +QDFML AAP+TR QR RGG+GV M +Y +M+ CDGDH+TLQALCDAL+V + V++W +PL ++G + DL R R+ + + L PRE L ++ R LWLS G EAHFRSLRL
Sbjct: 144 TLNRTATSGQCQFSSLADQLFTEAPGPR-FRPDVFLRHLALDTIRSDPAHYQDFMLAAAPLTRAQRSRGGKGVRMHDYLSRMSDLGCDGDHLTLQALCDALRVRVRVLRW--------APLDIAGGQDHYLER---------DLLTRGRKIGLIHSHELHPRERPGDLSPLGEGFEVPLRVLWLSQVGSEAHFRSLRL 323
BLAST of mRNA_H-elongata_contig15439.3577.1 vs. uniprot
Match: A0A7S1CKW7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CKW7_9STRA) HSP 1 Score: 120 bits (302), Expect = 1.310e-24 Identity = 76/193 (39.38%), Postives = 104/193 (53.89%), Query Frame = 1
Query: 25 SGACQFTAVADQLFRSRPVTEAFRPDIYLRLLALHCVSQNQDAFQDFMLHAAPITRQQRQRGGEGVDMKEYARQMASSRCDGDHITLQALCDALKVNINVVKWTRDNQRPPSPLAVSGAAETAAAHAKTS*PAIADLTMRPRRSVFVADTLRPREEAMRLDSRARD----VQLRGRTLWLSLQGEAHFRSLRL 591
SGACQF+++A Q++ R AFRPD++LR L + + + A+Q F+LHA TR+Q+ GG VD + Y +M+ RCDGDH+TLQAL DA +NVVKWT G E V+VA +RPR+ ++ R+ D V GR++WLSL GEAH+RSL L
Sbjct: 141 SGACQFSSLAYQMY-GRRAEPAFRPDVFLRRLVIRTMRNSVGAYQMFLLHAHARTRRQQGIGGVSVDFERYLSRMSEERCDGDHVTLQALADATGCELNVVKWTDG---------AGGEGE----------------------GVYVAQPVRPRQLRRKVCPRSADGSPLVNGSGRSVWLSLYGEAHYRSLCL 301
BLAST of mRNA_H-elongata_contig15439.3577.1 vs. uniprot
Match: A0A7S1C001_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C001_9STRA) HSP 1 Score: 111 bits (277), Expect = 3.590e-22 Identity = 73/211 (34.60%), Postives = 113/211 (53.55%), Query Frame = 1
Query: 22 RSGACQFTAVADQLFRSRPVT----EAFRPDIYLRLLALHCVSQNQDAFQDFMLHAAPITRQQRQRGGEGVDMKEYARQMASSRCDGDHITLQALCDALKVNINVVKWTRDNQRPPSPLAVSGAAE----TAAAHAKTS*PAIADLTMRP------------RRSVFVADTLRPREEAMRLDSRARDVQ--LRGRTLWLSLQGEAHFRSLR 588
R+G CQF VA L + + FRPD+ LR L LH +S N + ++ F++ TR Q GG GVD+ Y M+ S DGDH+TLQALCD LK+ I +VK + S + G ++ +++ ++ P + L++ R++++++ ++PR R+D R +DVQ +RGR +WLS G+AHFR LR
Sbjct: 153 RAGQCQFATVAAALSIDGSLMASDKDGFRPDLELRKLVLHAISHNPECYRHFLVVPGRRTRSSSQEGGTGVDLTHYLHTMSKSSTDGDHVTLQALCDVLKITIRIVKPVTHHSSTQS-TSYDGTSDYLSDDSSSTFSSNPPVLDPLSLSTGVFPIIDKCSSFSRNIYISEEMQPRR-LERIDRRIQDVQNLVRGRLVWLSHVGDAHFRYLR 361
BLAST of mRNA_H-elongata_contig15439.3577.1 vs. uniprot
Match: A0A7S0CDU1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CDU1_9STRA) HSP 1 Score: 103 bits (256), Expect = 5.210e-19 Identity = 88/253 (34.78%), Postives = 116/253 (45.85%), Query Frame = 1
Query: 25 SGACQFTAVADQLFRSRPVTEAF--RPDIYLRLLALHCVSQNQDAFQDFMLHAAPI-TRQQRQRGGEGVDMKEYARQMASSRCDGDHITLQALCDALKVNINVVKWTRDNQR---------------------------------PPSPLAVSGAAE----------TAAAHAKTS*P---------AIADLTMRPRRSVFVADTLRPREEAMRLDSRARDVQ--LRGRTLWLSL--QGEAHFRSLRLRGSDN 606
+G CQF VA L + F RPD+ LR LALH +S N +QDF+ A TR Q GG GVDMK Y M+ +CDGD ITLQALCDALK+ I VVK + R S ++S + T + + TS P + + P+ + V++ +RPR + R+DSR ++VQ +RGR +WLS GEAHFR LR DN
Sbjct: 191 AGQCQFACVASSLSKKEFSRLRFPHRPDLDLRRLALHTISHNPHMYQDFLTTAGGRRTRSQSTTGGRGVDMKSYLSSMSDPKCDGDAITLQALCDALKITIRVVKPVKQQGRNNDVYINVYSGNDDEIYRRHLLRLLHERMQFEVTESIASLSDECDSEDDCPSMESTECSISSTSCPFESCSVDNVLLNENPTNPKSYLSVSEEIRPRRLS-RIDSRVKEVQSHVRGRLIWLSHVGPGEAHFRYLRTSAIDN 442
BLAST of mRNA_H-elongata_contig15439.3577.1 vs. uniprot
Match: A0A067CF76_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067CF76_SAPPC) HSP 1 Score: 103 bits (256), Expect = 7.110e-19 Identity = 56/149 (37.58%), Postives = 74/149 (49.66%), Query Frame = 3
Query: 1233 CSICMCAVTGEPDAASLDKCVHAFHFDCITKWGETTNQCPMCKARFNTVTRLRDAHVKRFRGSRRXXXXXXXXXXXXXXXPVAARA-------VCLHCGDGGSEDRLMLCDGSGCGNGAHTFCCGLEEVPSGEWFCPDCQTRHEAVTRR 1658
CSIC+ AVT E L KCVH FHF+CI +W + TN CPMCK RF ++ + V ++R A A C+ CG+G SE+ L+LCD C HT C GL VP+ WFCP+ + R + R+
Sbjct: 56 CSICLDAVTLEAQGHLL-KCVHCFHFECIFRWAKVTNLCPMCKTRFTSIVQKNVHGVI----TKRTPIKHAKQVHDDDSSADLAHASNLLNEFACMLCGNGDSEETLLLCDADNCEAACHTLCLGLPGVPAQSWFCPEHEHRRSSARRQ 199
BLAST of mRNA_H-elongata_contig15439.3577.1 vs. uniprot
Match: A0A1V9Z5E7_9STRA (RING-type domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z5E7_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 1.960e-17 Identity = 52/155 (33.55%), Postives = 75/155 (48.39%), Query Frame = 3
Query: 1233 CSICMCAVTGEPDAASLDKCVHAFHFDCITKWGETTNQCPMCKARF----------NTVTRLRDAHVKRFRGSRRXXXXXXXXXXXXXXXPVAARAVCLHCGDGGSEDRLMLCDGSGCGNGAHTFCCGLEEVPSGEWFCPDCQTRHE--AVTRRR 1661
C++C+ +V+ + D L KCVH FHF+CI +W + N+CP+CK F NT+ AH K+ + C+ CG+G +ED L+LC C N HTFC + +VP+ WFC + + R A TRRR
Sbjct: 22 CTVCLDSVSVQ-DQGFLPKCVHCFHFECIFRWAQEANRCPVCKTSFKCIMQKDEQGNTIKTTAVAHAKQ-------KIRADASQDIAANRNLLNEYACMLCGNGDNEDTLLLCSVDNCDNACHTFCLAIPDVPNSSWFCLEHEHRRNSMATTRRR 168
BLAST of mRNA_H-elongata_contig15439.3577.1 vs. uniprot
Match: A0A2P4YRM7_9STRA (RING-type domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YRM7_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 3.500e-17 Identity = 53/146 (36.30%), Postives = 71/146 (48.63%), Query Frame = 3
Query: 1233 CSICMCAVTGEPDAASLDKCVHAFHFDCITKWGETTNQCPMCKARFNTVTRLRD----AHVKRFRGSRRXXXXXXXXXXXXXXXPVAARAVCLHCGDGGSEDRLMLCDGSGCGNGAHTFCCGLEEVPSGEWFCPDCQTRHEAVTRR 1658
C IC V + L KC H FHFDCI W + TN CP+CK +FN+VTR AH + + ++ + +A C CG G E L+LC+ GCG HT+C GL VP+ W+C +RH A +R
Sbjct: 44 CCICQ-DVVDALEQGHLSKCDHRFHFDCIVAWAKVTNLCPLCKTKFNSVTRQDAQGAVAHREVIQDIKQVYRPDPSDHDFAAQLRLVNQARCELCGSGEDEHVLLLCEALGCGVANHTYCIGLRSVPNTSWYC----SRHAATQQR 184
BLAST of mRNA_H-elongata_contig15439.3577.1 vs. uniprot
Match: A0A2P4XYG9_9STRA (RING-type domain-containing protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XYG9_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 4.450e-17 Identity = 49/130 (37.69%), Postives = 66/130 (50.77%), Query Frame = 3
Query: 1281 LDKCVHAFHFDCITKWGETTNQCPMCKARFNTVTRLRD----AHVKRFRGSRRXXXXXXXXXXXXXXXPVAARAVCLHCGDGGSEDRLMLCDGSGCGNGAHTFCCGLEEVPSGEWFCPDCQTRHEAVTRR 1658
L KC H FHFDCI W + TN CP+CK +FN+VTR AH + + ++ + +A C CG G E L+LC+ GCG HT+C GL VP+ W+C +RH A +R
Sbjct: 73 LSKCDHRFHFDCIVAWAKVTNLCPLCKTKFNSVTRQDAQGAVAHREVIQDIKQVYRPDPSDHDFAAQLRLVNQARCELCGSGEDEHVLLLCEALGCGVANHTYCIGLRSVPNTSWYC----SRHAATQQR 198
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 297.7 |
| Seed ortholog evalue | 1.5e-77 |
| Seed eggNOG ortholog | 2880.D7FVY3 |
| KEGG ko | ko:K12813,ko:K17586 |
| KEGG Pathway | ko03040,map03040 |
| GOs | GO:0000228,GO:0000785,GO:0000790,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006325,GO:0006338,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008623,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016043,GO:0016070,GO:0016071,GO:0016590,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0019904,GO:0031010,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0051276,GO:0060255,GO:0065007,GO:0070013,GO:0070063,GO:0070603,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1903506,GO:1904949,GO:2000112,GO:2001141 |
| EggNOG free text desc. | DNA topoisomerase binding |
| EggNOG OGs | KOG4430@1,KOG4430@2759 |
| EC | 3.6.4.13 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko01009,ko03041 |
| Hectar predicted targeting category | other localisation |
| Exons | 10 |
| Model size | 3407 |
| Cds size | 2283 |
| Stop | 0 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929911.4537807-CDS-H-elongata_contig15439:94..304 | 1622929911.4537807-CDS-H-elongata_contig15439:94..304 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig15439 95..304 - |
| 1691679205.3935575-CDS-H-elongata_contig15439:94..304 | 1691679205.3935575-CDS-H-elongata_contig15439:94..304 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig15439 95..304 - |
| 1622929911.467023-CDS-H-elongata_contig15439:788..1453 | 1622929911.467023-CDS-H-elongata_contig15439:788..1453 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig15439 789..1453 - |
| 1691679205.4096546-CDS-H-elongata_contig15439:788..1453 | 1691679205.4096546-CDS-H-elongata_contig15439:788..1453 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig15439 789..1453 - |
| 1622929911.4801033-CDS-H-elongata_contig15439:2188..3158 | 1622929911.4801033-CDS-H-elongata_contig15439:2188..3158 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig15439 2189..3158 - |
| 1691679205.417631-CDS-H-elongata_contig15439:2188..3158 | 1691679205.417631-CDS-H-elongata_contig15439:2188..3158 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig15439 2189..3158 - |
| 1622929911.4953682-CDS-H-elongata_contig15439:3879..4116 | 1622929911.4953682-CDS-H-elongata_contig15439:3879..4116 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig15439 3880..4116 - |
| 1691679205.425049-CDS-H-elongata_contig15439:3879..4116 | 1691679205.425049-CDS-H-elongata_contig15439:3879..4116 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig15439 3880..4116 - |
| 1622929911.5321212-CDS-H-elongata_contig15439:4513..4708 | 1622929911.5321212-CDS-H-elongata_contig15439:4513..4708 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig15439 4514..4708 - |
| 1691679205.4326062-CDS-H-elongata_contig15439:4513..4708 | 1691679205.4326062-CDS-H-elongata_contig15439:4513..4708 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig15439 4514..4708 - |
| 1622929911.554104-CDS-H-elongata_contig15439:4866..4872 | 1622929911.554104-CDS-H-elongata_contig15439:4866..4872 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig15439 4867..4872 - |
| 1691679205.4399292-CDS-H-elongata_contig15439:4866..4872 | 1691679205.4399292-CDS-H-elongata_contig15439:4866..4872 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig15439 4867..4872 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929911.5690863-UTR-H-elongata_contig15439:4872..5581 | 1622929911.5690863-UTR-H-elongata_contig15439:4872..5581 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig15439 4873..5581 - |
| 1691679205.4471555-UTR-H-elongata_contig15439:4872..5581 | 1691679205.4471555-UTR-H-elongata_contig15439:4872..5581 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig15439 4873..5581 - |
| 1622929911.5838773-UTR-H-elongata_contig15439:5632..5738 | 1622929911.5838773-UTR-H-elongata_contig15439:5632..5738 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig15439 5633..5738 - |
| 1691679205.4548142-UTR-H-elongata_contig15439:5632..5738 | 1691679205.4548142-UTR-H-elongata_contig15439:5632..5738 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig15439 5633..5738 - |
| 1622929911.5980136-UTR-H-elongata_contig15439:6053..6158 | 1622929911.5980136-UTR-H-elongata_contig15439:6053..6158 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig15439 6054..6158 - |
| 1691679205.4620476-UTR-H-elongata_contig15439:6053..6158 | 1691679205.4620476-UTR-H-elongata_contig15439:6053..6158 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig15439 6054..6158 - |
| 1622929911.6222148-UTR-H-elongata_contig15439:6592..6683 | 1622929911.6222148-UTR-H-elongata_contig15439:6592..6683 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig15439 6593..6683 - |
| 1691679205.4693482-UTR-H-elongata_contig15439:6592..6683 | 1691679205.4693482-UTR-H-elongata_contig15439:6592..6683 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig15439 6593..6683 - |
| 1622929911.6362648-UTR-H-elongata_contig15439:7512..7625 | 1622929911.6362648-UTR-H-elongata_contig15439:7512..7625 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig15439 7513..7625 - |
| 1691679205.476826-UTR-H-elongata_contig15439:7512..7625 | 1691679205.476826-UTR-H-elongata_contig15439:7512..7625 | Himanthalia elongata Himel1 dioecious | UTR | H-elongata_contig15439 7513..7625 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15439.3577.1 >prot_H-elongata_contig15439.3577.1 ID=prot_H-elongata_contig15439.3577.1|Name=mRNA_H-elongata_contig15439.3577.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=761bp
MHGPETSSTGDIPRDGVAKEGEREQEQQQEKQEEVDCSICMCAVTGEPDA
ASLDKCVHAFHFDCITKWGETTNQCPMCKARFNTVTRLRDAHVKRFRGSR
RRRVDDDEEEEEEEEEPVAARAVCLHCGDGGSEDRLMLCDGSGCGNGAHT
FCCGLEEVPSGEWFCPDCQTRHEAVTRRREANARQNAILARAWEPDSDSD
AEEHDAPLGGGLEEEEENVSIGTERTRRGRVMDDDRVDAFERGLVNSSGE
SNSDGDDNETEEYSVMGDVEEVSDPIDLVSSGHSEEEDEEEEDEEDVFIA
SRGPTRQRGGRQRRQQRQDTRGDHGGDSVVVARSHSSSESRSAAGPRRVR
SRLGLIATLTRGQRRGRGRGRRGRWRTGFGGPPGSLFGSSAAAGPGPNLW
PRVLASATSVLTPLHDFADVGGEEGEEKEGEMRDGGDNLVTQSWADAERA
RQVCNVRRSVGEILKRRYACAAPSTGTTALSSPTDRRIFKRPRMISPLAK
GSSSTAASSSSWSSPPSPPPSRYPPSTPNAEAAASSAPPRRIFNRNRMIH
ASATGSLSSSPPSRSPLSPSILPGMRRIDSSRGRGAAMDGIASGRGSGSS
SGSTDLRPNAAVADVRRLGKSEVQALVRRLRRVAIYLKERHTERFNGWLG
LTGLSGDELEGEGNVNALLEELRRLTLNGDSATLDALISAQLLAALRLCL
EPAGDGRMPIMSAPQRLSLLKVLMALPVQKAHLKESGVGKLVMAMAADPS
ETQENRELIKQ back to topmRNA from alignment at H-elongata_contig15439:95..7625- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-elongata_contig15439.3577.1 ID=mRNA_H-elongata_contig15439.3577.1|Name=mRNA_H-elongata_contig15439.3577.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7531bp|location=Sequence derived from alignment at H-elongata_contig15439:95..7625- (Himanthalia elongata Himel1 dioecious)
TCTACGGCGTGCCGTTTTCGAAGATCCGGGGCGTGTCAGTTCACCGCGGT
GGCGGATCAGCTTTTCCGGTCTCGGCCTGTGACGGAGGCTTTTCGGCCGG
ATATCTACCTCAGGTGGGAAATGGGAGAGAATGGTGTGGGATGTGGGATG
GATGCATATTGTAAAGAATGTGTGGATGTTTGAAGGGTTTCAATGAGTTC
ATATATATATATCTTCAAGAAAAAGTAGATGAAATGGTATGGCATGGGAT
GTCCGAGCTCTCCCTCGGGTCGCCCTCTTATATCGCGTGGTCAAAGTGAT
GGTGATAGTGTGATGGTGATAGTGATGGTGATAGTGATGGTAATAGTTAT
GGTAATAGTTATAGTGATGGTAATAGTGATGGTGATAGTGGTGTATGTGC
AGTGTACGTTGGTGATGTGAGTGGCAGAGCGATACCGAGCGCGCCAGAGG
AAACTAAAGCAATGTAGAATGGTGATTGGTGACTTGGTGAAATTGATGGT
TGATGGTTCCCGATACGATAAAAGTTATCAAGTTTCCTTTATTAGTATCC
TTTTTATAAAAAAAACACCCTCCAAACATCCACACTATATCCTATATACT
TCATCACACAGAGGGACTATGACCAACTATTGTCAGGGTCGAGCGTGTAC
ACCCTCTTTTTGTTTTCTCTCCTTTTTCCTCCTTTTTTTTCTTATATATG
CTCTCTATTTCCTCTACTTTTTTTTCTATTTATATATATTTATATATATA
TATATTCCTTTTTTTCCTTTTTCCTTTTTTTATTTTTATTTTTCTCTTAT
TATATGTATTATCTCTTTTTACGTTCGTTTTCTGCGGTTTTACGCAATAC
CCACATTATGTTCGCGCCACGATCGGAATAGCTAGTAATAACGGAAGTAT
CATTTTTCGTTTTGCCCTTCCTCTTCTCCCGGCGCAACACAGGCTTCTCG
CCCTACACTGCGTGTCCCAGAACCAGGATGCCTTCCAGGATTTCATGCTT
CACGCCGCCCCCATCACGCGACAGCAACGTCAGGTGTTACTTCCCTCTCT
CTGCGGCACTCGCATTTTTTCTACTTTTTTTAGAGCGTTATCGCTAAAGC
TACATTCCTTAGACCTTCTTCAGTAAATCTTCAAAGTTTTTTTTAAATCA
TCAATTTTAAAAATCCATTTACAAGAAAAACGTAAGACCTCTCTCTCCCT
TTAACAGACACATGCACGATGGGACGCTACCCCTTTTTCACATACCTGTA
ACACAGCTGCTGTATAGAGCCTATTCGTATATGTCTTATGTTATCCACTA
CGAAGTATTATCCAAATATAACTGGACTGTTAAACGGTTAGCTTTAAGTC
CCCCGGGGTGCTCCGTTTCTCATCCCGTCCCCCCTGACCCCGATCTTTTT
TTCTCTTGCCCCTTCTCTTTATTTTTCCTTTTCTCCCTTTCCCTTTTTTT
CTCAAATTGTGTCGAAGCGAGGAGGCGAAGGGGTGGACATGAAGGAGTAC
GCCAGGCAGATGGCAAGCAGCCGATGCGACGGAGATCACATCACTCTGCA
GGCGCTCTGCGATGCTCTCAAGGTCGAGGACATCACCAGCAACAGCAGTC
ATAGCATCAACTGGCTTGCGCTTAGACGAATCAGACAGCTTTTTCGGATG
GGGGGGGGGCGGGGGGCATTTCTTTCCCTTTTGAACGCCTCACGGATCTG
GCGCTGTTTTCCGCGACCTCCATTCCTTAACCCCCCACCCTCGCGAAAGC
CCAAAGCTTGTATTACAGTACCGAGTACTGGTTAATCACAACAAATTTTG
AGCTGCGGTGGTAGTAAGGAGGTTTACTTTCCCGGATACACCGGTTTCTC
TCTATTTACATAATACTTTCAATGTGGTCCGTGTCAGGTAAACATCAACG
TGGTCAAATGGACCAGGGATAACCAGCGCCCCCCCAGCCCCTTAGCCGTC
AGCGGCGCAGCCGAGACAGCGGCAGCCCATGCCAAGACCTCCTGTGGCTT
GATGAAGCCATCAGCAGGAGCTGGAACTGGAACTGGAACTGGAGAACCGG
CGATAGCCGACCTGACGATGCGTCCGAGGCGAAGCGTCTTCGTTGCCGAT
ACGCTCCGCCCGCGCGAGGAGGCGATGCGCCTGGACTCACGGGCGCGCGA
CGTGCAGCTGCGGGGACGTACCCTGTGGCTATCCCTTCAAGGCGAGGCGC
ACTTTCGAAGCCTCCGTCTGAGAGGCAGCGATAATGGCGGTAGTGCTAGA
GACGCCGTCGGACGCAGGGAAGAAGGCGCACTTTCCTTGGAGCGGTCGGA
GGTTTCATCGTGCGAGGCGTCGACTGAGTCGAGCTTTGGGGTGGTGTCGC
CACCCTATTTCCCCCCTGGTTATGCTGGCGACAGCCGTGGCGTTGTCGCT
AGTCCCGATGAGGTTCTTCGTCCGCACGTCAACGGAGGAGCGGTTGCTGC
GTCGGCAATCGGTGGCGTACTAACAGCTATCCCAACTTCAGCAACAACGG
CGGCTTCTCCTGCCGCCGTCGATGATGACCACGCGGGTGTGTCGAAGTCG
ACCGTTGAGCCTACCGCATCTTCGGCAACGGAGAGCTTCTTACCCATCCC
CAGTCGTGTCGAAGAGGTAATATTTCGTCTGAAAACCATAGCTGCATATC
CTGCAAAACAGTTTTGGAACTGGGAACGGGAAAACGGGGAATCGAGAAGC
TAAAAGAGGAGGGCGCGCGGGGGCCGGCAAGAGTTGAGACGTTATTTAGG
TTAATGCATGTGTCTGTCGACCGCCCCCTTGCTCGATTCATCTTCTCTCT
CTTCCCACACATACTATTAATGCGTTCGCGCCATGATATGATAATCGTGA
AATCAGACACATGTTTGTATGATATCCTCCGAGGTTTTCCAACCTCTCGA
TTGTGTTCGCTCCTCAGGGACCTGAGACTTCTTCCACTGGAGATATTCCC
CGGGATGGGGTGGCAAAAGAGGGCGAACGAGAGCAGGAGCAGCAGCAGGA
GAAGCAGGAAGAGGTGGACTGCTCGATCTGCATGTGCGCCGTCACGGGAG
AGCCAGATGCCGCGTCGCTCGACAAGTGCGTGCACGCCTTCCACTTCGAC
TGCATCACGAAGGTTTGTAACGATTTTTTGAACCAAAAGACGTCGACAAG
GGCCGGGAAAGACTGTATCCGACCCGTAGCGGACAATACTTTGAGGGGGA
ATGATGGAAGGAAGACAGGCGTCCGCCCTCTCTACCTAGATGGGTCTAAA
TTTCGTGCATCATCATTTTTCTGAAAACGCAAGAAAACGGGAAGCTATCC
GTGACTGCTCCCTGGTGCTCTTTACCCGAACACCGTCCTTGCATGACAAG
ACAACATGAGAAGCCGAGGTTGAAAACATGGCTTGTCTTTCGATCCGTGG
CTGACCGCATCTTCGAGAAACCACCCTCGCCCCTTGAAGATGCCGCCGCC
TCCGCCCCCGCCTACCATGAACTGCACTGTTTTGTTTGTGCTGTCGTGTG
CTATCACAGTGGGGTGAGACGACGAACCAGTGCCCCATGTGCAAGGCCCG
ATTTAACACGGTCACGAGACTGCGAGACGCACACGTGAAGAGGTTTCGGG
GGAGTCGGCGTAGACGTGTCGACGATGATGAGGAGGAGGAAGAAGAGGAG
GAAGAGCCCGTCGCGGCACGAGCGGTGTGTCTCCACTGCGGGGACGGCGG
ATCGGAGGATCGACTGATGCTGTGCGACGGTTCGGGCTGCGGGAATGTCA
GTAGAGATCAATGAATATTTCTTTTGCGTGTGTGTCTCTCGCTGTACCAT
TTATAGATTGTGTGTGATACAGCTATACGGAGTATGTTGATGAAGTCATG
CTTTATTGCTCGTTGTTGGAAGTTGGATTTTTTTTCGGTCATATCCTTGC
TGTAGTTTTGATTCCTTCGGACGGCGATATCTATACAATATACATTGATA
TTACCGTATATTTTTGAGTATAATGTTTTGTTTCTTTTATTTGGAGCTGC
CACTTTTTTCCGAGTATTATTATTATACACCATTACTGTTTTATTTTCAT
ATGGAGAGTACGTTCAACGTTTTCCTTCCGGATCGTGTTTTTACCTCGAG
CTGAATTTTGACATAAACTTATGAGATAATTCAAATCAATCACCTAACGT
CTAAATAAATACACACGTTATTTATATTAAAAAAACCTTGAACTCATTCC
AACCCTCCGAACATCCACACTCTTAGCGCCGTGAGAGGTGCCATCCAGGG
GACCAACTATCGTAGGGTTCGAATGTGTACATTACTACCCTTGATCACAA
AATCGTCACACTTAAGTATATAGGTCAGTAAAGCACATGGTTGTATTATG
TATATATATATCGATTAATTTTGGACTGTATTACAGCTCGTGATAAGCTG
AAAAATAATGATATTCTCATCAATTCGCTATCCCTTACCCTACTCAACCC
TTTCTTGGGGGACACAGGGCGCCCATACCTTCTGCTGTGGGCTGGAAGAA
GTGCCGTCCGGGGAGTGGTTCTGCCCCGACTGCCAGACCCGCCACGAGGC
CGTGACCCGCCGACGCGAAGCCAATGCCCGACAGAACGCGATACTTGCGC
GGGCGTGGGAGCCGGACTCTGACTCCGACGCCGAAGAACACGACGCTCCG
TTGGGGGGGGGGTTAGAAGAGGAAGAAGAAAACGTTTCGATCGGGACGGA
GAGGACGAGGCGGGGACGCGTGATGGATGACGATAGAGTCGACGCGTTCG
AGCGTGGCCTCGTGAACAGCAGTGGGGAGAGCAACAGCGACGGAGATGAC
AACGAGACGGAGGAGTATAGCGTCATGGGCGACGTCGAGGAGGTCTCTGA
CCCCATCGATTTGGTGTCAAGCGGCCATTCAGAAGAGGAAGACGAGGAGG
AGGAGGATGAGGAGGATGTCTTTATTGCTTCAAGGGGTCCGACGAGGCAG
CGGGGGGGACGACAGCGGCGGCAGCAGCGGCAGGATACGAGAGGCGATCA
TGGCGGCGACAGTGTTGTAGTGGCGAGGTCGCACTCGAGCAGTGAAAGCC
GCAGTGCCGCTGGACCAAGAAGAGTGAGGAGCAGGCTTGGACTCATTGCT
ACCTTGACCCGAGGGCAAAGGCGCGGACGCGGGAGAGGTAGGAGAGGACG
CTGGCGCACGGGCTTTGGCGGCCCTCCCGGATCTCTATTTGGCTCCTCCG
CCGCGGCGGGTCCCGGCCCTAACTTATGGCCGAGAGTCTTGGCGTCGGCG
ACTTCGGTGTTGACTCCTCTGCACGATTTTGCCGACGTTGGAGGAGAGGA
GGGGGAAGAAAAGGAGGGAGAAATGAGGGACGGTGGCGATAATCTCGTGA
CGCAGTCGTGGGCGGACGCGGAACGTGCGAGGCAGGTATGTAATGTACGG
CGCTCTGTCGGAGAGATACTAAAAAGAAGATATGCTTGTCGGGATAGGAG
ACGGAGCTCTTCGCGGACAATTTGTTTTTTGCTGTGAAGCATCGAATCCA
GACTGGAGAGCCCAAGCCTCATGTGCTGTGCTGTTCTGTGTTGCGCTGCT
TTGTACGAGGTCGGCTCCCGCCTCCTCTCCGCTTTCGCGCCAACCGCCGA
TCCTGGGTGTTTCTTAAGATTTCGACGCTGGGCAGTTGTTTTCACTGACG
ACCTTGTGTAGCTGTGTGTGTGTGTGTGTCACCAACTGCTGCCCTCGTTA
TTGTATGCTTCAAATGGTTGCTTGGGTGGCTGTGGAGGGTGTTGCTGAGT
ATTCGCGCGCTGCTTTCGATCCACCGACCGAAGTGCGTGGCGGCTCCCGA
GCAGTACATCGCATTTTGTTTGCGATGCCCTTTAAACCCTGTCCTGGGTA
TAAAGCGAAGCATGGATAGTTGTTATCCATGAAAACGTCGACAGGTTTGC
CTTTTCCCGCACGCGCCTTTTCCGACGAGACTTGGTACTTTATTTTTTGT
TTAATTTTAAAATTCAACCTGCTCCCTAGCCCGCGTTCACCCACGTAACT
TACCTTCAACATCGAAACCCTCAGGCTTCGCGAGGGTCGACGCCGACCGG
CAGACAGGAGACTCGCACGATCTCCTCCCACCGGCGGCTTGTGGATCGAG
GCGCCCCCAGTCCCGGCGCCTTGCTCCGTCCGAGCGTCGCTGCCCGTCCT
AGCGCTGCCTCTGCCGCCGTAGGCGCTGCACCGTCCACCGGCACCACAGC
GTTATCGTCGCCCACCGACCGGAGGATTTTTAAGCGGCCCAGGATGATAT
CCCCTTTAGCGAAAGGCTCTTCGTCAACCGCTGCTTCTTCTTCGTCATGG
TCGTCACCGCCGTCACCTCCGCCATCACGATATCCACCGTCTACGCCAAA
CGCTGAGGCGGCCGCGTCATCAGCACCCCCCCGTAGAATTTTCAATCGGA
ACAGGATGATTCACGCTTCAGCGACGGGCTCTTTGTCATCGTCGCCTCCG
TCCCGAAGTCCACTGTCACCATCAATATTACCCGGGATGCGCCGCATCGA
TTCGTCGAGGGGGCGTGGCGCCGCTATGGATGGCATCGCTTCTGGAAGAG
GCAGCGGTAGCAGTAGCGGCTCGACAGATTTAAGGCCTAACGCCGCTGTG
GCAGACGTTCGTCGCTTGGGGAAGTCCGAGGTGCAGGCGCTCGTGCGGCG
CCTTCGCAGGGTGGCGATATATCTGAAAGAGCGGCACACGGAAAGGTTCA
ACGGCTGGCTCGGGTTGACAGGCCTTAGCGGTGACGAGTTGGAGGGCGAG
GGAAATGTGAACGCGTTGCTGGAAGAGCTCCGAAGACTCACTCTCAACGG
CGATAGTGCCACTCTCGATGCGCTAATTTCCGCTCAGGTATGTACCGCTG
CTTGAAGCGTTGTATGTAAGGGGTAGTGGCCGCAGGAACAAGATTGGCAA
GAGGGGTGTCTTCACTTAACCAATTTTGGGTTAGTTTAAATACCTAAATT
TGACCGGCGCCTTTATTGAAGGGGGCTCGAAGTAAGGGGGCATTTTCGTT
TTTTATTTGCATACCCAAAAATCGAAATTTACGATAGTAGGGATATAAAA
AAAAATGTCGTGATGTGTAATAATATATATGTATTTATATTCGTGCCCCT
CGAAATAAAGTGTGAATAACGGTACATATATTTTTGTCCGTTGTAGCTCG
AAAAAACCCCCCCTCCCGGAATAAAGGAAAGCGTGAACACAGAGCCCTCT
CTCTATCTTTAGATATAAGTATAAGATGCTTTCTTTCCCTCGCCAGTTGT
AATGTTGCTTCCTATAAACCATATCCCATCCATCGGCTACCCCATGCCCT
GTGCGACCACTACAACTGCAGCTCCTCGCGGCGCTTCGTCTTTGCCTCGA
GCCTGCGGGGGACGGCCGCATGCCTATCATGTCGGCACCACAGCGGTTGT
CCCTCTTGAAGGTGCTGATGGCCTTGCCGGTTCAGAAGGCTCACCTCAAG
GAGAGCGGCGTCGGCAAGCTGGTGATGGCGATGGCGGCAGACCCGAGCGA
GACGCAAGAAAATCGAGAGCTGATAAAGCAG back to topCoding sequence (CDS) from alignment at H-elongata_contig15439:95..7625- >mRNA_H-elongata_contig15439.3577.1 ID=mRNA_H-elongata_contig15439.3577.1|Name=mRNA_H-elongata_contig15439.3577.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4566bp|location=Sequence derived from alignment at H-elongata_contig15439:95..7625- (Himanthalia elongata Himel1 dioecious)
ATGCATATGCATGGACCTGAGACTTCTTCCACTGGAGATATTCCCCGGGA
TGGGGTGGCAAAAGAGGGCGAACGAGAGCAGGAGCAGCAGCAGGAGAAGC
AGGAAGAGGTGGACTGCTCGATCTGCATGTGCGCCGTCACGGGAGAGCCA
GATGCCGCGTCGCTCGACAAGTGCGTGCACGCCTTCCACTTCGACTGCAT
CACGAAGGGACCTGAGACTTCTTCCACTGGAGATATTCCCCGGGATGGGG
TGGCAAAAGAGGGCGAACGAGAGCAGGAGCAGCAGCAGGAGAAGCAGGAA
GAGGTGGACTGCTCGATCTGCATGTGCGCCGTCACGGGAGAGCCAGATGC
CGCGTCGCTCGACAAGTGCGTGCACGCCTTCCACTTCGACTGCATCACGA
AGTGGGGTGAGACGACGAACCAGTGCCCCATGTGCAAGGCCCGATTTAAC
ACGGTCACGAGACTGCGAGACGCACACGTGAAGAGGTTTCGGGGGAGTCG
GCGTAGACGTGTCGACGATGATGAGGAGGAGGAAGAAGAGGAGGAAGAGC
CCGTCGCGGCACGAGCGGTGTGTCTCCACTGCGGGGACGGCGGATCGGAG
GATCGACTGATGCTGTGCGACGGTTCGGGCTGCGGGAATTGGGGTGAGAC
GACGAACCAGTGCCCCATGTGCAAGGCCCGATTTAACACGGTCACGAGAC
TGCGAGACGCACACGTGAAGAGGTTTCGGGGGAGTCGGCGTAGACGTGTC
GACGATGATGAGGAGGAGGAAGAAGAGGAGGAAGAGCCCGTCGCGGCACG
AGCGGTGTGTCTCCACTGCGGGGACGGCGGATCGGAGGATCGACTGATGC
TGTGCGACGGTTCGGGCTGCGGGAATGGCGCCCATACCTTCTGCTGTGGG
CTGGAAGAAGTGCCGTCCGGGGAGTGGTTCTGCCCCGACTGCCAGACCCG
CCACGAGGCCGTGACCCGCCGACGCGAAGCCAATGCCCGACAGAACGCGA
TACTTGCGCGGGCGTGGGAGCCGGACTCTGACTCCGACGCCGAAGAACAC
GACGCTCCGTTGGGGGGGGGGTTAGAAGAGGAAGAAGAAAACGTTTCGAT
CGGGACGGAGAGGACGAGGCGGGGACGCGTGATGGATGACGATAGAGTCG
ACGCGTTCGAGCGTGGCCTCGTGAACAGCAGTGGGGAGAGCAACAGCGAC
GGAGATGACAACGAGACGGAGGAGTATAGCGTCATGGGCGACGTCGAGGA
GGTCTCTGACCCCATCGATTTGGTGTCAAGCGGCCATTCAGAAGAGGAAG
ACGAGGAGGAGGAGGATGAGGAGGATGTCTTTATTGCTTCAAGGGGTCCG
ACGAGGCAGCGGGGGGGACGACAGCGGCGGCAGCAGCGGCAGGATACGAG
AGGCGATCATGGCGGCGACAGTGTTGTAGTGGCGAGGTCGCACTCGAGCA
GTGAAAGCCGCAGTGCCGCTGGACCAAGAAGAGTGAGGAGCAGGCTTGGA
CTCATTGCTACCTTGACCCGAGGGCAAAGGCGCGGACGCGGGAGAGGTAG
GAGAGGACGCTGGCGCACGGGCTTTGGCGGCCCTCCCGGATCTCTATTTG
GCTCCTCCGCCGCGGCGGGTCCCGGCCCTAACTTATGGCCGAGAGTCTTG
GCGTCGGCGACTTCGGTGTTGACTCCTCTGCACGATTTTGCCGACGTTGG
AGGAGAGGAGGGGGAAGAAAAGGAGGGAGAAATGAGGGACGGTGGCGATA
ATCTCGTGACGCAGTCGTGGGCGGACGCGGAACGTGCGAGGCAGGTATGT
AATGTACGGCGCTCTGTCGGAGAGATACTAAAAAGAAGATATGCTTGGCG
CCCATACCTTCTGCTGTGGGCTGGAAGAAGTGCCGTCCGGGGAGTGGTTC
TGCCCCGACTGCCAGACCCGCCACGAGGCCGTGACCCGCCGACGCGAAGC
CAATGCCCGACAGAACGCGATACTTGCGCGGGCGTGGGAGCCGGACTCTG
ACTCCGACGCCGAAGAACACGACGCTCCGTTGGGGGGGGGGTTAGAAGAG
GAAGAAGAAAACGTTTCGATCGGGACGGAGAGGACGAGGCGGGGACGCGT
GATGGATGACGATAGAGTCGACGCGTTCGAGCGTGGCCTCGTGAACAGCA
GTGGGGAGAGCAACAGCGACGGAGATGACAACGAGACGGAGGAGTATAGC
GTCATGGGCGACGTCGAGGAGGTCTCTGACCCCATCGATTTGGTGTCAAG
CGGCCATTCAGAAGAGGAAGACGAGGAGGAGGAGGATGAGGAGGATGTCT
TTATTGCTTCAAGGGGTCCGACGAGGCAGCGGGGGGGACGACAGCGGCGG
CAGCAGCGGCAGGATACGAGAGGCGATCATGGCGGCGACAGTGTTGTAGT
GGCGAGGTCGCACTCGAGCAGTGAAAGCCGCAGTGCCGCTGGACCAAGAA
GAGTGAGGAGCAGGCTTGGACTCATTGCTACCTTGACCCGAGGGCAAAGG
CGCGGACGCGGGAGAGGTAGGAGAGGACGCTGGCGCACGGGCTTTGGCGG
CCCTCCCGGATCTCTATTTGGCTCCTCCGCCGCGGCGGGTCCCGGCCCTA
ACTTATGGCCGAGAGTCTTGGCGTCGGCGACTTCGGTGTTGACTCCTCTG
CACGATTTTGCCGACGTTGGAGGAGAGGAGGGGGAAGAAAAGGAGGGAGA
AATGAGGGACGGTGGCGATAATCTCGTGACGCAGTCGTGGGCGGACGCGG
AACGTGCGAGGCAGGTATGTAATGTACGGCGCTCTGTCGGAGAGATACTA
AAAAGAAGATATGCTTGCGCTGCACCGTCCACCGGCACCACAGCGTTATC
GTCGCCCACCGACCGGAGGATTTTTAAGCGGCCCAGGATGATATCCCCTT
TAGCGAAAGGCTCTTCGTCAACCGCTGCTTCTTCTTCGTCATGGTCGTCA
CCGCCGTCACCTCCGCCATCACGATATCCACCGTCTACGCCAAACGCTGA
GGCGGCCGCGTCATCAGCACCCCCCCGTAGAATTTTCAATCGGAACAGGA
TGATTCACGCTTCAGCGACGGGCTCTTTGTCATCGTCGCCTCCGTCCCGA
AGTCCACTGTCACCATCAATATTACCCGGGATGCGCCGCATCGATTCGTC
GAGGGGGCGTGGCGCCGCTATGGATGGCATCGCTTCTGGAAGAGGCAGCG
GTAGCAGTAGCGGCTCGACAGATTTAAGGCCTAACGCCGCTGTGGCAGAC
GTTCGTCGCTTGGGGAAGTCCGAGGTGCAGGCGCTCGTGCGGCGCCTTCG
CAGGGTGGCGATATATCTGAAAGAGCGGCACACGGAAAGGTTCAACGGCT
GGCTCGGGTTGACAGGCCTTAGCGGTGACGAGTTGGAGGGCGAGGGAAAT
GTGAACGCGTTGCTGGAAGAGCTCCGAAGACTCACTCTCAACGGCGATAG
TGCCACTCTCGATGCGCTAATTTCCGCTCAGGCGCTGCACCGTCCACCGG
CACCACAGCGTTATCGTCGCCCACCGACCGGAGGATTTTTAAGCGGCCCA
GGATGATATCCCCTTTAGCGAAAGGCTCTTCGTCAACCGCTGCTTCTTCT
TCGTCATGGTCGTCACCGCCGTCACCTCCGCCATCACGATATCCACCGTC
TACGCCAAACGCTGAGGCGGCCGCGTCATCAGCACCCCCCCGTAGAATTT
TCAATCGGAACAGGATGATTCACGCTTCAGCGACGGGCTCTTTGTCATCG
TCGCCTCCGTCCCGAAGTCCACTGTCACCATCAATATTACCCGGGATGCG
CCGCATCGATTCGTCGAGGGGGCGTGGCGCCGCTATGGATGGCATCGCTT
CTGGAAGAGGCAGCGGTAGCAGTAGCGGCTCGACAGATTTAAGGCCTAAC
GCCGCTGTGGCAGACGTTCGTCGCTTGGGGAAGTCCGAGGTGCAGGCGCT
CGTGCGGCGCCTTCGCAGGGTGGCGATATATCTGAAAGAGCGGCACACGG
AAAGGTTCAACGGCTGGCTCGGGTTGACAGGCCTTAGCGGTGACGAGTTG
GAGGGCGAGGGAAATGTGAACGCGTTGCTGGAAGAGCTCCGAAGACTCAC
TCTCAACGGCGATAGTGCCACTCTCGATGCGCTAATTTCCGCTCAGCTCC
TCGCGGCGCTTCGTCTTTGCCTCGAGCCTGCGGGGGACGGCCGCATGCCT
ATCATGTCGGCACCACAGCGGTTGTCCCTCTTGAAGGTGCTGATGGCCTT
GCCGGTTCAGAAGGCTCACCTCAAGGAGAGCGGCGTCGGCAAGCTGGTGA
TGGCGATGGCGGCAGACCCGAGCGAGACGCAAGAAAATCGAGAGCTGATA
AAGCAGCTCCTCGCGGCGCTTCGTCTTTGCCTCGAGCCTGCGGGGGACGG
CCGCATGCCTATCATGTCGGCACCACAGCGGTTGTCCCTCTTGAAGGTGC
TGATGGCCTTGCCGGTTCAGAAGGCTCACCTCAAGGAGAGCGGCGTCGGC
AAGCTGGTGATGGCGATGGCGGCAGACCCGAGCGAGACGCAAGAAAATCG
AGAGCTGATAAAGCAG back to top
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