prot_H-elongata_contig154311.3575.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig154311.3575.1
Unique Nameprot_H-elongata_contig154311.3575.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length58
Homology
BLAST of mRNA_H-elongata_contig154311.3575.1 vs. uniprot
Match: D7FSD7_ECTSI (Nicastrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSD7_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 3.910e-24
Identity = 46/58 (79.31%), Postives = 51/58 (87.93%), Query Frame = 0
Query:    1 QTCLGWTDIDGKRSPQCLPLGGQSSWASIGPPGLPERETVLAVAGMDSTSLFHDRAPG 58
            Q CLGWTDI+G RSPQC PLGGQSSWAS+G  GL  R+TVLAV+GMDSTS+FHDRAPG
Sbjct:  306 QECLGWTDINGDRSPQCKPLGGQSSWASVGGAGLGGRQTVLAVSGMDSTSMFHDRAPG 363          
BLAST of mRNA_H-elongata_contig154311.3575.1 vs. uniprot
Match: A0A7S4DDP0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DDP0_HETAK)

HSP 1 Score: 80.9 bits (198), Expect = 1.970e-16
Identity = 36/56 (64.29%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    3 CLGWTDIDGKRSPQCLPLGGQSSWASIGPPGLPERETVLAVAGMDSTSLFHDRAPG 58
            CL W D+DG+R PQCLPLGGQS W ++GP     R  VLAVAGMDS + FHDRA G
Sbjct:    1 CLAWEDVDGRRDPQCLPLGGQSVWGTLGPRDA-GRPAVLAVAGMDSAAFFHDRADG 55          
BLAST of mRNA_H-elongata_contig154311.3575.1 vs. uniprot
Match: A0A7S2V4V2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4V2_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.030e-13
Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    3 CLGWTDIDGKRSPQCLPLGGQSSWASIGPPGLPERETVLAVAGMDSTSLFHDRAP 57
            CL W DIDG+R PQCLPLGG S+WAS+  P  P +  V   A +DS +LFHD+ P
Sbjct:   19 CLAWQDIDGERDPQCLPLGGLSTWASLPGPPDPVKPKVFLTAAIDSATLFHDQVP 73          
BLAST of mRNA_H-elongata_contig154311.3575.1 vs. uniprot
Match: H3GV47_PHYRM (Nicastrin n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GV47_PHYRM)

HSP 1 Score: 68.9 bits (167), Expect = 3.190e-12
Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    3 CLGWTDIDGKRSPQCLPLGGQSSWASIGPPGLPERETVLAVAGMDSTSLFHDRAPG 58
            CL +T+I GKRSP+C P+GGQSSWA  G   L   E V+A+AGMD+TSL H  APG
Sbjct:  210 CLNFTNIYGKRSPKCDPIGGQSSWAMRG--NLESEEIVMAMAGMDATSLSHVLAPG 263          
BLAST of mRNA_H-elongata_contig154311.3575.1 vs. uniprot
Match: A0A6A3S396_9STRA (Nicastrin n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3S396_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 8.140e-12
Identity = 33/56 (58.93%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    3 CLGWTDIDGKRSPQCLPLGGQSSWASIGPPGLPERETVLAVAGMDSTSLFHDRAPG 58
            CL +T+I G RSP+C P+GGQSSWA  G   L  +E V+AVAGMD+TS+ H  APG
Sbjct:  212 CLNFTNIYGHRSPKCDPIGGQSSWAMRG--NLKSKEIVMAVAGMDATSISHVLAPG 265          
BLAST of mRNA_H-elongata_contig154311.3575.1 vs. uniprot
Match: K0TI67_THAOC (Nicastrin n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TI67_THAOC)

HSP 1 Score: 66.2 bits (160), Expect = 2.850e-11
Identity = 32/64 (50.00%), Postives = 39/64 (60.94%), Query Frame = 0
Query:    1 QTCLGWTDIDGKRSPQCLPLGGQSSWASIGPP---GLPE---RETVLAVAGMDSTSLFHDRAPG 58
            Q CL W D DGK SP+C PLGG S WA+ G P   G  E   + T+L    +DSTS+FH  +PG
Sbjct:  245 QKCLEWKDTDGKSSPKCAPLGGNSVWATAGTPLSAGYQEGDDKPTILVATSIDSTSMFHTVSPG 308          
BLAST of mRNA_H-elongata_contig154311.3575.1 vs. uniprot
Match: G4ZR63_PHYSP (Nicastrin n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZR63_PHYSP)

HSP 1 Score: 65.1 bits (157), Expect = 7.260e-11
Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    3 CLGWTDIDGKRSPQCLPLGGQSSWASIGPPGLPERETVLAVAGMDSTSLFHDRAPG 58
            CL +T+I G RSP+C P+GGQSSWA  G   L   E V+A+AGMD+TS+ H  APG
Sbjct:  212 CLNFTNIYGNRSPKCDPIGGQSSWAMRG--NLKSGEIVMAMAGMDATSVSHVLAPG 265          
BLAST of mRNA_H-elongata_contig154311.3575.1 vs. uniprot
Match: M4BVK0_HYAAE (Nicastrin n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BVK0_HYAAE)

HSP 1 Score: 63.2 bits (152), Expect = 3.460e-10
Identity = 32/56 (57.14%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    3 CLGWTDIDGKRSPQCLPLGGQSSWASIGPPGLPERETVLAVAGMDSTSLFHDRAPG 58
            CL + +I G RSP+C P+GGQSSWA  G   L   E V+A+AGMD+TSL H  APG
Sbjct:  217 CLEFVNIYGHRSPRCDPIGGQSSWAMRG--NLKSDEIVMAMAGMDATSLSHVLAPG 270          
BLAST of mRNA_H-elongata_contig154311.3575.1 vs. uniprot
Match: A0A3M6VQN6_9STRA (Nicastrin n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQN6_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.650e-9
Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    3 CLGWTDIDGKRSPQCLPLGGQSSWASIGPPGLPERETVLAVAGMDSTSLFHDRAPG 58
            CL + +I G RSP+C P+GGQS+WA  G   L  +E V+A+AGMD+TSL H  A G
Sbjct:  217 CLKFVNIHGDRSPKCDPIGGQSAWAMRG--NLKSKEIVMAMAGMDTTSLSHVLASG 270          
BLAST of mRNA_H-elongata_contig154311.3575.1 vs. uniprot
Match: A0A835YYT6_9STRA (Nicastrin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYT6_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 4.160e-9
Identity = 30/62 (48.39%), Postives = 34/62 (54.84%), Query Frame = 0
Query:    3 CLGWTDIDGKRSPQCLPLGGQSSWASIGPP-----GLPE--RETVLAVAGMDSTSLFHDRAP 57
            CL W D DG R PQCLP+GGQSSW  +  P       P   +  VL  A MDS S FH+  P
Sbjct:  162 CLQWVDKDGARDPQCLPMGGQSSWGVLDGPYSSSDSAPSGGKPVVLLSAAMDSVSFFHNTVP 223          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig154311.3575.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FSD7_ECTSI3.910e-2479.31Nicastrin n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A7S4DDP0_HETAK1.970e-1664.29Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V4V2_9STRA1.030e-1356.36Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
H3GV47_PHYRM3.190e-1260.71Nicastrin n=1 Tax=Phytophthora ramorum TaxID=16432... [more]
A0A6A3S396_9STRA8.140e-1258.93Nicastrin n=3 Tax=Phytophthora TaxID=4783 RepID=A0... [more]
K0TI67_THAOC2.850e-1150.00Nicastrin n=1 Tax=Thalassiosira oceanica TaxID=159... [more]
G4ZR63_PHYSP7.260e-1157.14Nicastrin n=1 Tax=Phytophthora sojae (strain P6497... [more]
M4BVK0_HYAAE3.460e-1057.14Nicastrin n=1 Tax=Hyaloperonospora arabidopsidis (... [more]
A0A3M6VQN6_9STRA1.650e-953.57Nicastrin n=1 Tax=Peronospora effusa TaxID=542832 ... [more]
A0A835YYT6_9STRA4.160e-948.39Nicastrin n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008710NicastrinPANTHERPTHR21092NICASTRINcoord: 2..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig154311contigH-elongata_contig154311:149..322 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig154311.3575.1mRNA_H-elongata_contig154311.3575.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig154311 149..322 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig154311.3575.1 ID=prot_H-elongata_contig154311.3575.1|Name=mRNA_H-elongata_contig154311.3575.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=58bp
QTCLGWTDIDGKRSPQCLPLGGQSSWASIGPPGLPERETVLAVAGMDSTS
LFHDRAPG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008710Nicastrin