prot_H-elongata_contig154178.3572.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig154178.3572.1
Unique Nameprot_H-elongata_contig154178.3572.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length95
Homology
BLAST of mRNA_H-elongata_contig154178.3572.1 vs. uniprot
Match: A0A6H5KVJ9_9PHAE (Methionine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVJ9_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 1.950e-39
Identity = 68/75 (90.67%), Postives = 73/75 (97.33%), Query Frame = 0
Query:   20 FYVTTPIYYVNDKPHIGHAYTTLACDAIARFMRLDGREVMFVTGTDEHGQKVESSALRAAKSPQQFCDEVSQQFR 94
            +YVTTPIYYVNDKPHIGHAYTTLACD IARFMRLDGREVMF+TGTDEHGQKVE+SAL+A KSPQQFCDEVSQ+FR
Sbjct:   71 YYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGREVMFLTGTDEHGQKVEASALKADKSPQQFCDEVSQEFR 145          
BLAST of mRNA_H-elongata_contig154178.3572.1 vs. uniprot
Match: A0A836CKB9_9STRA (Methionine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKB9_9STRA)

HSP 1 Score: 139 bits (349), Expect = 2.080e-36
Identity = 62/75 (82.67%), Postives = 69/75 (92.00%), Query Frame = 0
Query:   20 FYVTTPIYYVNDKPHIGHAYTTLACDAIARFMRLDGREVMFVTGTDEHGQKVESSALRAAKSPQQFCDEVSQQFR 94
            +Y+TTPIYYVNDKPHIGHAYTTLACD IARFMRLDGR+VMF+TGTDEHGQKV+ SA +  KSPQ+FCDEVSQ FR
Sbjct:   71 YYITTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGRDVMFLTGTDEHGQKVQESAAKQGKSPQEFCDEVSQSFR 145          
BLAST of mRNA_H-elongata_contig154178.3572.1 vs. uniprot
Match: W7TRH3_9STRA (Methionine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRH3_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.360e-35
Identity = 70/97 (72.16%), Postives = 77/97 (79.38%), Query Frame = 0
Query:    5 STATSAAET-------SSPRNTFYVTTPIYYVNDKPHIGHAYTTLACDAIARFMRLDGREVMFVTGTDEHGQKVESSALRAAKSPQQFCDEVSQQFR 94
            ST+ SAA T       +S +  +YVTTPIYYVNDKPHIGHAYTTLACD IARFMRLDGR+V F+TGTDEHGQKVE SA +A KSPQ F DEVSQ FR
Sbjct:   71 STSVSAAATVKDSPGSNSKKTGYYVTTPIYYVNDKPHIGHAYTTLACDVIARFMRLDGRDVFFLTGTDEHGQKVEQSAAKAGKSPQTFVDEVSQNFR 167          
BLAST of mRNA_H-elongata_contig154178.3572.1 vs. uniprot
Match: UPI001106F896 (methionine--tRNA ligase n=1 Tax=Luteithermobacter gelatinilyticus TaxID=2582913 RepID=UPI001106F896)

HSP 1 Score: 134 bits (336), Expect = 5.510e-35
Identity = 61/75 (81.33%), Postives = 67/75 (89.33%), Query Frame = 0
Query:   20 FYVTTPIYYVNDKPHIGHAYTTLACDAIARFMRLDGREVMFVTGTDEHGQKVESSALRAAKSPQQFCDEVSQQFR 94
            FY+TTPIYYVNDKPHIGHAYTTLACD +ARF RLDG EVMF+TGTDEHGQKVE SA  A K+PQ+FCD+VSQ FR
Sbjct:    5 FYITTPIYYVNDKPHIGHAYTTLACDVLARFKRLDGYEVMFLTGTDEHGQKVEKSARAAGKTPQEFCDDVSQGFR 79          
BLAST of mRNA_H-elongata_contig154178.3572.1 vs. uniprot
Match: A0A501PSU6_9PROT (Methionine--tRNA ligase n=1 Tax=Emcibacter nanhaiensis TaxID=1505037 RepID=A0A501PSU6_9PROT)

HSP 1 Score: 133 bits (335), Expect = 7.660e-35
Identity = 61/75 (81.33%), Postives = 68/75 (90.67%), Query Frame = 0
Query:   20 FYVTTPIYYVNDKPHIGHAYTTLACDAIARFMRLDGREVMFVTGTDEHGQKVESSALRAAKSPQQFCDEVSQQFR 94
            FY+TTPIYYVNDKPHIGHAYTTLACD +ARF RLDG +VMF+TGTDEHGQKVE SAL A K+P +FCDEVSQ+FR
Sbjct:    5 FYITTPIYYVNDKPHIGHAYTTLACDFLARFKRLDGYDVMFLTGTDEHGQKVEKSALAAGKTPIEFCDEVSQRFR 79          
BLAST of mRNA_H-elongata_contig154178.3572.1 vs. uniprot
Match: A0A7V2T6P9_9PROT (Methionine--tRNA ligase (Fragment) n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A7V2T6P9_9PROT)

HSP 1 Score: 126 bits (317), Expect = 1.310e-34
Identity = 59/75 (78.67%), Postives = 63/75 (84.00%), Query Frame = 0
Query:   20 FYVTTPIYYVNDKPHIGHAYTTLACDAIARFMRLDGREVMFVTGTDEHGQKVESSALRAAKSPQQFCDEVSQQFR 94
            FYVTTPIYYVND PHIGHAYTTLACDA+ARFMRLDGR V F+TGTDEHGQKVE +A  A   PQ F D VSQ+FR
Sbjct:    7 FYVTTPIYYVNDSPHIGHAYTTLACDALARFMRLDGRRVRFLTGTDEHGQKVEKAAREAGLDPQDFTDRVSQRFR 81          
BLAST of mRNA_H-elongata_contig154178.3572.1 vs. uniprot
Match: A0A3B0SYP8_9ZZZZ (Methionine--tRNA ligase n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0SYP8_9ZZZZ)

HSP 1 Score: 132 bits (332), Expect = 2.120e-34
Identity = 62/78 (79.49%), Postives = 66/78 (84.62%), Query Frame = 0
Query:   17 RNTFYVTTPIYYVNDKPHIGHAYTTLACDAIARFMRLDGREVMFVTGTDEHGQKVESSALRAAKSPQQFCDEVSQQFR 94
            R  FY+TTPIYYVND PHIGHAYTTLACD IARF RLDG EVMF+TGTDEHGQKVE SA    K PQ+FCDEVSQ+FR
Sbjct:    4 RPAFYITTPIYYVNDIPHIGHAYTTLACDVIARFKRLDGFEVMFLTGTDEHGQKVEKSAAAKGKDPQEFCDEVSQRFR 81          
BLAST of mRNA_H-elongata_contig154178.3572.1 vs. uniprot
Match: UPI0011DD0A1C (class I tRNA ligase family protein n=1 Tax=Azospirillum sp. B506 TaxID=137721 RepID=UPI0011DD0A1C)

HSP 1 Score: 124 bits (312), Expect = 3.020e-34
Identity = 58/76 (76.32%), Postives = 65/76 (85.53%), Query Frame = 0
Query:   19 TFYVTTPIYYVNDKPHIGHAYTTLACDAIARFMRLDGREVMFVTGTDEHGQKVESSALRAAKSPQQFCDEVSQQFR 94
            TFY+TTPIYYVND PHIGHAYTTLACD +ARFMRLDG +V F+TGTDEHGQKVE SA +A  +PQ+F D VSQ FR
Sbjct:    6 TFYLTTPIYYVNDVPHIGHAYTTLACDVLARFMRLDGYDVKFLTGTDEHGQKVEKSAEKAGIAPQEFTDRVSQNFR 81          
BLAST of mRNA_H-elongata_contig154178.3572.1 vs. uniprot
Match: UPI000E5D996A (methionine--tRNA ligase n=1 Tax=Algihabitans albus TaxID=2164067 RepID=UPI000E5D996A)

HSP 1 Score: 132 bits (331), Expect = 3.090e-34
Identity = 62/81 (76.54%), Postives = 68/81 (83.95%), Query Frame = 0
Query:   14 SSPRNTFYVTTPIYYVNDKPHIGHAYTTLACDAIARFMRLDGREVMFVTGTDEHGQKVESSALRAAKSPQQFCDEVSQQFR 94
            S  R  +YVTTPIYYVND PH+GHAYTTLACDA+ARFMRLDGR VMF+TGTDEHGQKVE SA +A K P+ F DEVSQ FR
Sbjct:    2 SDQRKRYYVTTPIYYVNDVPHLGHAYTTLACDALARFMRLDGRRVMFLTGTDEHGQKVEKSAQKAGKDPKTFTDEVSQNFR 82          
BLAST of mRNA_H-elongata_contig154178.3572.1 vs. uniprot
Match: A0A3M1K284_9PROT (Methionine--tRNA ligase (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1K284_9PROT)

HSP 1 Score: 122 bits (307), Expect = 4.080e-34
Identity = 58/83 (69.88%), Postives = 69/83 (83.13%), Query Frame = 0
Query:   12 ETSSPRNTFYVTTPIYYVNDKPHIGHAYTTLACDAIARFMRLDGREVMFVTGTDEHGQKVESSALRAAKSPQQFCDEVSQQFR 94
            E+ +PR  +YVTTPIYYVND PHIGHAYTTLACD +ARF RLDG  V+F+TGTDEHGQKV+ SA  A  +PQ+FCD VS++FR
Sbjct:    2 ESETPR--YYVTTPIYYVNDVPHIGHAYTTLACDVLARFKRLDGYRVLFLTGTDEHGQKVQKSAEAAGIAPQEFCDRVSKRFR 82          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig154178.3572.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVJ9_9PHAE1.950e-3990.67Methionine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CKB9_9STRA2.080e-3682.67Methionine--tRNA ligase n=1 Tax=Tribonema minus Ta... [more]
W7TRH3_9STRA1.360e-3572.16Methionine--tRNA ligase n=2 Tax=Monodopsidaceae Ta... [more]
UPI001106F8965.510e-3581.33methionine--tRNA ligase n=1 Tax=Luteithermobacter ... [more]
A0A501PSU6_9PROT7.660e-3581.33Methionine--tRNA ligase n=1 Tax=Emcibacter nanhaie... [more]
A0A7V2T6P9_9PROT1.310e-3478.67Methionine--tRNA ligase (Fragment) n=1 Tax=Rhodosp... [more]
A0A3B0SYP8_9ZZZZ2.120e-3479.49Methionine--tRNA ligase n=1 Tax=hydrothermal vent ... [more]
UPI0011DD0A1C3.020e-3476.32class I tRNA ligase family protein n=1 Tax=Azospir... [more]
UPI000E5D996A3.090e-3476.54methionine--tRNA ligase n=1 Tax=Algihabitans albus... [more]
A0A3M1K284_9PROT4.080e-3469.88Methionine--tRNA ligase (Fragment) n=1 Tax=Alphapr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033911Methioninyl-tRNA synthetase core domainPRINTSPR01041TRNASYNTHMETcoord: 54..68
score: 55.31
coord: 22..35
score: 56.35
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 17..94
e-value: 1.9E-32
score: 114.6
IPR015413Methionyl/Leucyl tRNA synthetasePFAMPF09334tRNA-synt_1gcoord: 20..93
e-value: 4.4E-25
score: 88.3
NoneNo IPR availablePANTHERPTHR43326:SF5coord: 4..94
NoneNo IPR availablePANTHERPTHR43326FAMILY NOT NAMEDcoord: 4..94
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 18..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig154178contigH-elongata_contig154178:708..992 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig154178.3572.1mRNA_H-elongata_contig154178.3572.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig154178 708..992 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig154178.3572.1 ID=prot_H-elongata_contig154178.3572.1|Name=mRNA_H-elongata_contig154178.3572.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=95bp
LQTSSTATSAAETSSPRNTFYVTTPIYYVNDKPHIGHAYTTLACDAIARF
MRLDGREVMFVTGTDEHGQKVESSALRAAKSPQQFCDEVSQQFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033911MetRS_core
IPR014729Rossmann-like_a/b/a_fold
IPR015413Methionyl/Leucyl_tRNA_Synth