prot_H-elongata_contig153859.3556.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig153859.3556.1
Unique Name	prot_H-elongata_contig153859.3556.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	90

Homology

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BLAST of mRNA_H-elongata_contig153859.3556.1 vs. uniprot
Match: A0A2H1VB05_SPOFR (SFRICE_041671 (Fragment) n=1 Tax=Spodoptera frugiperda TaxID=7108 RepID=A0A2H1VB05_SPOFR)

HSP 1 Score: 51.6 bits (122), Expect = 3.580e-6
Identity = 25/83 (30.12%), Postives = 44/83 (53.01%), Query Frame = 0

Query:    4 VQGAESPGEAWSKLVQHYHASGLKERRCLTVDFYTMKMELGEHPRKFLLRVDQMVKELERVERPVDPKDVDIVILSGLTPQYD 86
            ++ A+S  EAW  L + Y   GL  R  L    ++ K+        +L ++ ++  +L  +E P+D + V +++LSGLT  YD
Sbjct:   43 IRTAKSAHEAWKILQKAYEGRGLSRRLGLLRSLFSTKLSENSSMEVYLNKIKEISHQLNEIESPLDDEFVAVIMLSGLTDDYD 125

[Close]

BLAST of mRNA_H-elongata_contig153859.3556.1 vs. uniprot
Match: UPI00103F0D66 (uncharacterized protein LOC114362197 n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103F0D66)

HSP 1 Score: 51.2 bits (121), Expect = 8.190e-6
Identity = 26/83 (31.33%), Postives = 44/83 (53.01%), Query Frame = 0

Query:    4 VQGAESPGEAWSKLVQHYHASGLKERRCLTVDFYTMKMELGEHPRKFLLRVDQMVKELERVERPVDPKDVDIVILSGLTPQYD 86
            ++ A+S  EAW+ L + Y   GL  R  L    +  K+        +L ++ ++  +L  +E P+D + V ++ILSGLT  YD
Sbjct:   71 IRTAKSAHEAWTILQKTYEGRGLSRRLGLLRSLFNTKLSECSSMEVYLNKIKEISHQLSEIESPLDDELVAVIILSGLTDDYD 153

[Close]

BLAST of mRNA_H-elongata_contig153859.3556.1 vs. uniprot
Match: A0A2H1WMK4_SPOFR (SFRICE_021333 n=1 Tax=Spodoptera frugiperda TaxID=7108 RepID=A0A2H1WMK4_SPOFR)

HSP 1 Score: 51.2 bits (121), Expect = 1.730e-5
Identity = 25/83 (30.12%), Postives = 43/83 (51.81%), Query Frame = 0

Query:    4 VQGAESPGEAWSKLVQHYHASGLKERRCLTVDFYTMKMELGEHPRKFLLRVDQMVKELERVERPVDPKDVDIVILSGLTPQYD 86
            ++ A+S  EAW  L + Y   GL  R  L    +  K+        +L ++ ++  +L  +E P+D + V +++LSGLT  YD
Sbjct:   74 IRTAKSAHEAWKILQKAYEGRGLSRRLGLLRSLFNTKLSENSSMEVYLNKIKEISHQLNEIESPLDDEFVAVIMLSGLTDDYD 156

[Close]

BLAST of mRNA_H-elongata_contig153859.3556.1 vs. uniprot
Match: UPI00103FEA55 (uncharacterized protein LOC114361313 n=2 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103FEA55)

HSP 1 Score: 51.2 bits (121), Expect = 1.860e-5
Identity = 26/83 (31.33%), Postives = 44/83 (53.01%), Query Frame = 0

Query:    4 VQGAESPGEAWSKLVQHYHASGLKERRCLTVDFYTMKMELGEHPRKFLLRVDQMVKELERVERPVDPKDVDIVILSGLTPQYD 86
            ++ A+S  EAW+ L + Y   GL  R  L    +  K+        +L ++ ++  +L  +E P+D + V ++ILSGLT  YD
Sbjct:   71 IRTAKSAHEAWTILQKTYEGRGLSRRLGLLRSLFNTKLSECSSMEVYLNKIKEISHQLSEIESPLDDELVAVIILSGLTDDYD 153

[Close]

BLAST of mRNA_H-elongata_contig153859.3556.1 vs. uniprot
Match: UPI001F8D56D1 (Uncharacterized protein n=1 Tax=Spodoptera exigua TaxID=7107 RepID=UPI001F8D56D1)

HSP 1 Score: 49.7 bits (117), Expect = 6.880e-5
Identity = 24/83 (28.92%), Postives = 44/83 (53.01%), Query Frame = 0

Query:    4 VQGAESPGEAWSKLVQHYHASGLKERRCLTVDFYTMKMELGEHPRKFLLRVDQMVKELERVERPVDPKDVDIVILSGLTPQYD 86
            ++ A+S  EAW+ L + Y   GL  +  L    +  K+        +L ++ ++  +L  +E P+D + + ++ILSGLT  YD
Sbjct:   69 IRTAKSAYEAWNNLKKTYEGKGLCRKLGLLRSLFGTKLADSNSMDGYLNKIKEVAHQLSEIESPLDDEFIAVIILSGLTSDYD 151

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig153859.3556.1 vs. uniprot

BLAST of mRNA_H-elongata_contig153859.3556.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
A0A2H1VB05_SPOFR	3.580e-6	30.12	SFRICE_041671 (Fragment) n=1 Tax=Spodoptera frugip...	[more]
UPI00103F0D66	8.190e-6	31.33	uncharacterized protein LOC114362197 n=1 Tax=Ostri...	[more]
A0A2H1WMK4_SPOFR	1.730e-5	30.12	SFRICE_021333 n=1 Tax=Spodoptera frugiperda TaxID=...	[more]
UPI00103FEA55	1.860e-5	31.33	uncharacterized protein LOC114361313 n=2 Tax=Ostri...	[more]
UPI001F8D56D1	6.880e-5	28.92	Uncharacterized protein n=1 Tax=Spodoptera exigua ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 3..86 e-value: 2.5E-12 score: 46.6

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig153859	contig	H-elongata_contig153859:1193..1462 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig153859.3556.1	mRNA_H-elongata_contig153859.3556.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig153859 1193..1462 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig153859.3556.1 ID=prot_H-elongata_contig153859.3556.1|Name=mRNA_H-elongata_contig153859.3556.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=90bp
FDIVQGAESPGEAWSKLVQHYHASGLKERRCLTVDFYTMKMELGEHPRKF
LLRVDQMVKELERVERPVDPKDVDIVILSGLTPQYDAEV*