prot_H-elongata_contig153844.3554.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig153844.3554.1
Unique Nameprot_H-elongata_contig153844.3554.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length106
Homology
BLAST of mRNA_H-elongata_contig153844.3554.1 vs. uniprot
Match: A0A6H5JDW8_9PHAE (FH2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDW8_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 2.270e-26
Identity = 66/107 (61.68%), Postives = 76/107 (71.03%), Query Frame = 0
Query:    1 MDSTSEYVRLSLLKVLTVMVETGAAGLKTVLNALDVVKAQKNSDLRFDLLVRALSMTREPRE-LPQAVGVTVFLNAVLASAFEFDERVLLRGEMIKAGVMQAIENVR 106
            +DSTSE VR SLLKVLTVM ETG  GLK VLNALDV KA+KN DLRF LL   +    +  E L  A+ V VFLN VL+ AF+F+ERVLLRGEM+  GV+ AI   R
Sbjct:  195 LDSTSERVRSSLLKVLTVMTETGQDGLKVVLNALDVAKARKNQDLRFSLLPGIIVGGNDGEEDLRLALAVAVFLNTVLSRAFKFEERVLLRGEMVAGGVVAAIAGAR 301          
BLAST of mRNA_H-elongata_contig153844.3554.1 vs. uniprot
Match: D8LCH4_ECTSI (FH2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH4_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 1.290e-24
Identity = 72/148 (48.65%), Postives = 78/148 (52.70%), Query Frame = 0
Query:    1 MDSTSEYVRLSLLKVLTVMVETGAAGLKTVLNALDVVKAQKNSDLRFDLLVRALSMT------------------------------------------REPRELPQAVGVTVFLNAVLASAFEFDERVLLRGEMIKAGVMQAIENVR 106
            +DSTSE VR SLLKVLTVM ETG  GLK VLNALDV KAQKN DLRF LLV ALS                                             E   L  A+ V VFLN VL+ AFEF+ERVLLRGEM+  GV+ AI   R
Sbjct:  162 LDSTSERVRSSLLKVLTVMTETGQDGLKVVLNALDVAKAQKNQDLRFSLLVGALSKAAXXXXXXXXXXRGTQPGSGSSEEEGYGVGGTQPGIRGGGNDGEEDGHLRLALAVAVFLNTVLSRAFEFEERVLLRGEMVAGGVVAAIAGAR 309          
BLAST of mRNA_H-elongata_contig153844.3554.1 vs. uniprot
Match: D7FPH1_ECTSI (Formin-like 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPH1_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 1.200e-21
Identity = 53/105 (50.48%), Postives = 73/105 (69.52%), Query Frame = 0
Query:    2 DSTSEYVRLSLLKVLTVMVETGAAGLKTVLNALDVVKAQKNSDLRFDLLVRALSMTREPRELPQAVGVTVFLNAVLASAFEFDERVLLRGEMIKAGVMQAIENVR 106
            DS S YVR +LLK+LT++ E+G +G +TV NALD VK  K+ DLRF LLV A     +   +     + VF N +L+SAFEF+ERV+LR EMI AG+++A++ VR
Sbjct:  207 DSCSNYVRCNLLKLLTIVTESGPSGFETVTNALDHVKVDKDEDLRFALLVEAFG-DADSSGVALITDLVVFFNTILSSAFEFEERVMLRTEMISAGMLEAMQRVR 310          
BLAST of mRNA_H-elongata_contig153844.3554.1 vs. uniprot
Match: D7FR06_ECTSI (Formin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR06_ECTSI)

HSP 1 Score: 51.6 bits (122), Expect = 2.620e-5
Identity = 33/104 (31.73%), Postives = 59/104 (56.73%), Query Frame = 0
Query:    3 STSEYVRLSLLKVLTVMVETGAAGLKTVLNALDVVKAQKNSDLRFDLLVRALSMTREPRELPQAVGVTVFLNAVLASAFEFDERVLLRGEMIKAGVMQAIENVR 106
            S   ++    L++L V++  G  G + VL A+D  K  K   +RF  L+ AL MT E  +L     V +F+N ++ SA + +ER+ +R ++I  G++ A+E ++
Sbjct:   91 SEDVFICTQALELLAVLMVDGPEGYRAVLAAMDYFKLVKGERVRFYSLLDAL-MTDEA-DLAFKRDVMLFINTLVNSAMDIEERIEIRADLIYTGILDAVERLK 192          
BLAST of mRNA_H-elongata_contig153844.3554.1 vs. uniprot
Match: A0A6H5L634_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L634_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 2.680e-5
Identity = 33/104 (31.73%), Postives = 59/104 (56.73%), Query Frame = 0
Query:    3 STSEYVRLSLLKVLTVMVETGAAGLKTVLNALDVVKAQKNSDLRFDLLVRALSMTREPRELPQAVGVTVFLNAVLASAFEFDERVLLRGEMIKAGVMQAIENVR 106
            S   ++    L++L V++  G  G + VL A+D  K  K   +RF  L+ AL MT E  +L     V +F+N ++ SA + +ER+ +R ++I  G++ A+E ++
Sbjct:  240 SEDVFICTQALELLAVLMVDGPEGYRAVLAAMDYFKLVKGERVRFYSLLDAL-MTDEA-DLAFKRDVMLFINTLVNSAMDIEERIEIRADLIYTGILDAVERLK 341          
BLAST of mRNA_H-elongata_contig153844.3554.1 vs. uniprot
Match: UPI00109BB303 (inverted formin-2-like isoform X1 n=3 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BB303)

HSP 1 Score: 51.6 bits (122), Expect = 2.700e-5
Identity = 27/106 (25.47%), Postives = 55/106 (51.89%), Query Frame = 0
Query:    1 MDSTSEYVRLSLLKVLTVMVETGAAGLKTVLNALDVVKAQKNSDLRFDLLVRALSMTREPRELPQAVGVTVFLNAVLASAFEFDERVLLRGEMIKAGVMQAIENVR 106
            +D+ +  ++  + ++L+ +      G K  ++AL+  K  K    RF L++  L   ++   +P +     F+N +L S  +FD+RV LR E I  G+++ +  +R
Sbjct:  130 LDTNNTMIKKQVFELLSALCLYSEQGYKLAIDALENYKVTKGQRYRFSLIINEL---KDAEVIPYSTACLAFINVILISTDDFDQRVRLRNEFIGLGLLEILTQLR 232          
BLAST of mRNA_H-elongata_contig153844.3554.1 vs. uniprot
Match: UPI001425A44F (inverted formin-2-like isoform X1 n=2 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425A44F)

HSP 1 Score: 50.8 bits (120), Expect = 5.020e-5
Identity = 28/106 (26.42%), Postives = 57/106 (53.77%), Query Frame = 0
Query:    1 MDSTSEYVRLSLLKVLTVMVETGAAGLKTVLNALDVVKAQKNSDLRFDLLVRALSMTREPRELPQAVGVTVFLNAVLASAFEFDERVLLRGEMIKAGVMQAIENVR 106
            +D+ +E V++ L+++L+ +    ++G    +++L+  K  K    RF  +V  L   ++   +P    +  F+NA+L S  +FDER+ LR E I   ++  +  +R
Sbjct:  127 LDTKNEMVKIQLIELLSALCVHSSSGYTLAIDSLEHYKITKQQRYRFSFMVNEL---KQDVIIPYKASLVSFINAILISTEDFDERIRLRNEFIGLKLLDILTQLR 229          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig153844.3554.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JDW8_9PHAE2.270e-2661.68FH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LCH4_ECTSI1.290e-2448.65FH2 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FPH1_ECTSI1.200e-2150.48Formin-like 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=... [more]
D7FR06_ECTSI2.620e-531.73Formin n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
A0A6H5L634_9PHAE2.680e-531.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI00109BB3032.700e-525.47inverted formin-2-like isoform X1 n=3 Tax=Exaiptas... [more]
UPI001425A44F5.020e-526.42inverted formin-2-like isoform X1 n=2 Tax=Anneissi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010472Formin, FH3 domainPFAMPF06367Drf_FH3coord: 26..105
e-value: 5.6E-7
score: 29.4
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..106
e-value: 2.1E-12
score: 48.8
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig153844contigH-elongata_contig153844:455..1304 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig153844.3554.1mRNA_H-elongata_contig153844.3554.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig153844 455..1319 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig153844.3554.1 ID=prot_H-elongata_contig153844.3554.1|Name=mRNA_H-elongata_contig153844.3554.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=106bp
MDSTSEYVRLSLLKVLTVMVETGAAGLKTVLNALDVVKAQKNSDLRFDLL
VRALSMTREPRELPQAVGVTVFLNAVLASAFEFDERVLLRGEMIKAGVMQ
AIENVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010472FH3_dom
IPR011989ARM-like
IPR016024ARM-type_fold