prot_H-elongata_contig153815.3552.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig153815.3552.1
Unique Nameprot_H-elongata_contig153815.3552.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length144
Homology
BLAST of mRNA_H-elongata_contig153815.3552.1 vs. uniprot
Match: D8LHC6_ECTSI (Allergen V5/Tpx-1 related n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHC6_ECTSI)

HSP 1 Score: 236 bits (603), Expect = 1.300e-69
Identity = 115/142 (80.99%), Postives = 126/142 (88.73%), Query Frame = 0
Query:    1 QVAGEVCTYFDATASGIVAQLVVSDGERSRHNRKALLAKHFTVCGVALGAHPTVGAACVITLAAGYGPRPLSSAADVVCAPRETPSAEFRQVLESVPVPQITDEVAKCLKVGMEVQLQYAPGKVKVTFVQASGARKSMSCSW 142
            QVAGEVCTYFDATA GIVAQL+VSDGERSRHNRKALLA HF VCG+A+G HPTVGAACVITLA GYGPRPLS +ADVVC     PSAEFR+VLES+PVPQIT+EV+KC++VGMEVQLQY PG +K TFVQASGARKSM C W
Sbjct: 1071 QVAGEVCTYFDATAEGIVAQLLVSDGERSRHNRKALLAAHFKVCGIAIGTHPTVGAACVITLAGGYGPRPLSRSADVVCEAGSAPSAEFREVLESIPVPQITEEVSKCVEVGMEVQLQYTPGSIKCTFVQASGARKSMGCKW 1212          
BLAST of mRNA_H-elongata_contig153815.3552.1 vs. uniprot
Match: A0A836CD41_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD41_9STRA)

HSP 1 Score: 142 bits (358), Expect = 1.640e-36
Identity = 73/159 (45.91%), Postives = 101/159 (63.52%), Query Frame = 0
Query:    1 QVAGEVCTYFDATASGIVAQLVVSDGERSRHN-----------------RKALLAKHFTVCGVALGAHPTVGAACVITLAAGYGPRPLSSAADVVCAPRETPSAEFRQVLESVPVPQITDEVAKCLKVGMEVQLQYAPGKVKVTFVQASGARKSMSCSW 142
            QVAGEV + ++++A GIV Q++++DGER+R N                 RK+++ +HF VCGVA   HP+VG   V+TLA G+GP+ L   A V   P E PS EF +VLES+PVPQ+TDEV K +  G+ V+L Y PG+VK+T  Q  G+   +SC W
Sbjct: 1292 QVAGEVISVYESSAVGIVCQMLINDGERTRQNEAKHEKIXXXXXXXXXXRKSIIGQHFKVCGVATAPHPSVGTVGVVTLAGGWGPKSLEREALVSVEPGEDPSPEFERVLESIPVPQVTDEVRKAIAAGLAVELDYKPGEVKLTVKQRDGSASLLSCQW 1450          
BLAST of mRNA_H-elongata_contig153815.3552.1 vs. uniprot
Match: A0A7S2SPY0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPY0_9STRA)

HSP 1 Score: 118 bits (296), Expect = 3.570e-28
Identity = 61/146 (41.78%), Postives = 91/146 (62.33%), Query Frame = 0
Query:    1 QVAGEVCTYFDATASGIVAQLVVSDGERSRHNRKALLAKHFTVCGVALGAHPTVGAACVITLAAGYGPRPLSSA--ADVVCAPRETPSAEFRQVLESVPVPQITDEVAKCLKVGMEVQLQYAPG-KVKVTFVQASGARKSMSCSWT 143
            ++AGEV  Y + +A+  V QL++ DGE+ RHNR A+L+  F VCG+A   HP++ +  V+ LA G+GP+PL+ A  A +  A        F+ VL+S+PVPQ+ ++VA  L+ G EV L Y PG     TF Q SG   +++C W+
Sbjct:  872 EIAGEVIAYREGSAAAFVEQLIICDGEQRRHNRTAVLSPEFRVCGIAASEHPSLESVVVVPLAGGFGPKPLAEATVASLSAASTAEEQETFQAVLDSIPVPQLHEQVAAALEDGAEVTLDYKPGGTATATFKQPSGEANAVACDWS 1017          
BLAST of mRNA_H-elongata_contig153815.3552.1 vs. uniprot
Match: A0A7S2CHX3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CHX3_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 2.920e-22
Identity = 54/145 (37.24%), Postives = 81/145 (55.86%), Query Frame = 0
Query:    3 AGEVCTY--FDATASGIVAQLVVSDGERSRHNRKALLAKHFTVCGVALGAHPTVGAACVITLAAGYGP---RPLSSAADVVCAPRETPSAEFRQVLESVPVPQITDEVAKCLKVGMEVQLQYAPGKVKVTFVQASGARKSMSCSW 142
            AGEV  Y    A+A  ++  ++VSDGE+SRH+R+A+L   F V G+A G HPT  +  V+ LA G+G      L   A+  CA  E  S +F Q+L+SVP+  + D++   L  G  + L++ PG + V    A GA++     W
Sbjct:   83 AGEVIGYSVHPASAEELILNIIVSDGEKSRHDRRAILNPKFKVAGIATGPHPTYSSTAVVCLAGGFGDFTLGDLGEEAEATCAGTEPMSPQFIQILDSVPIEDLVDQLKSELAAGSTLTLKFTPGCLHVNATDARGAKEEYDVEW 227          
BLAST of mRNA_H-elongata_contig153815.3552.1 vs. uniprot
Match: A0A7S2G3N3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G3N3_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 6.630e-17
Identity = 47/136 (34.56%), Postives = 66/136 (48.53%), Query Frame = 0
Query:    7 CTYFDATASGIVAQLVVSDGERSRHNRKALLAKHFTVCGVALGAHPTVGAACVITLAAGYGPRPLSSAADVVCAPRETPSAEFRQVLESVPVPQITDEVAKCLKVGMEVQLQYAPGKVKVTFVQASGARKSMSCSW 142
            CT+      GIVA+L + DG+++    + LL     VCGV  G HPT+  AC ++LA G+GP+P+     V C     P   F +VL SVP P   DE+   +  G +V L Y P  V      + G     +  W
Sbjct:  432 CTHT-RVPEGIVAELCLCDGDKTHRMLRDLLHPDLKVCGVGCGPHPTMEYACCVSLAGGWGPKPVDKRRIVFCKGGSEPDDRFMEVLNSVPEPDFIDELIDQISQGSDVHLNYTPSGVDAKITDSEGEVTEYNLEW 566          
BLAST of mRNA_H-elongata_contig153815.3552.1 vs. uniprot
Match: A0A7S2B9N3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B9N3_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 9.110e-11
Identity = 36/103 (34.95%), Postives = 49/103 (47.57%), Query Frame = 0
Query:   41 FTVCGVALGAHPTVGAACVITLAAGYGPRPLSSAADVVCAPRETPSAEFRQVLESVPVPQITDEVAKCLKVGMEVQLQYAPGK-VKVTFVQASGARKSMSCSW 142
            F V GV  G HPT+  AC +TLA G+GP+P+     V+CA    P   F +VL SVP      E+   ++ G  V L Y P   V+       G+    +  W
Sbjct:    5 FRVAGVGCGPHPTMTYACAVTLAGGFGPKPVDKRRIVMCAAGGEPDERFMEVLRSVPDDDFQQEILDQIEGGCSVHLSYDPNAGVEAKLTDEDGSVTEYNMEW 107          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig153815.3552.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LHC6_ECTSI1.300e-6980.99Allergen V5/Tpx-1 related n=2 Tax=Ectocarpus TaxID... [more]
A0A836CD41_9STRA1.640e-3645.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SPY0_9STRA3.570e-2841.78Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2CHX3_9STRA2.920e-2237.24Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2G3N3_9STRA6.630e-1734.56Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2B9N3_9STRA9.110e-1134.95Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig153815contigH-elongata_contig153815:635..1453 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig153815.3552.1mRNA_H-elongata_contig153815.3552.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig153815 635..1453 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig153815.3552.1 ID=prot_H-elongata_contig153815.3552.1|Name=mRNA_H-elongata_contig153815.3552.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=144bp
QVAGEVCTYFDATASGIVAQLVVSDGERSRHNRKALLAKHFTVCGVALGA
HPTVGAACVITLAAGYGPRPLSSAADVVCAPRETPSAEFRQVLESVPVPQ
ITDEVAKCLKVGMEVQLQYAPGKVKVTFVQASGARKSMSCSWT*
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