prot_H-elongata_contig15379.3550.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15379.3550.1
Unique Nameprot_H-elongata_contig15379.3550.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length197
Homology
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BLAST of mRNA_H-elongata_contig15379.3550.1 vs. uniprot
Match: D7G778_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G778_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 4.260e-88
Identity = 136/197 (69.04%), Postives = 165/197 (83.76%), Query Frame = 0 
Query:    1 EKSASVEATLRTEDYGTFATSFRAKDKVGA-LGPLRWTSKPLSFPFALKDPTPMVIGIVHDVKTKEGQLNFSAKLSNNLDGKIMLPSAGDPVATMIASHSPDKDSDIRASASVLDLLGSGVGNGAIGVSYRRDLDTVSGSTSRVTLESKDTGDFAWSLSNTTKRMTLVLSGRGRLGLRGSREGVASTVSLRSSFRLF 196
            +K+A VE ++R E+ G F+T+ +A +K G  LGPL+WTS P+SFPFAL++ TPMVI I HD+ TKEG L+ +AKL++N DGK+MLPS GDPVAT++ SHSPDK SDIRASA+VLDL+GSG G GAIGV+YRRDLD V+GS+SRVTLE KDTGDFAWSLSNT+KRMTLVLSGRGR+  RG   GV STVSLR SFR+F
Sbjct:  101 DKTAVVEGSIRNEELGMFSTTLKASEKEGGVLGPLKWTSNPVSFPFALQEATPMVIAIAHDINTKEGHLSIAAKLNSNFDGKLMLPSQGDPVATLVGSHSPDKASDIRASANVLDLVGSGFGKGAIGVTYRRDLDAVAGSSSRVTLEGKDTGDFAWSLSNTSKRMTLVLSGRGRVARRGEGTGVGSTVSLRQSFRMF 297
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15379.3550.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G778_ECTSI4.260e-8869.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15379contigH-elongata_contig15379:5277..6823 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15379.3550.1mRNA_H-elongata_contig15379.3550.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15379 1187..6823 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15379.3550.1 ID=prot_H-elongata_contig15379.3550.1|Name=mRNA_H-elongata_contig15379.3550.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=197bp
EKSASVEATLRTEDYGTFATSFRAKDKVGALGPLRWTSKPLSFPFALKDP
TPMVIGIVHDVKTKEGQLNFSAKLSNNLDGKIMLPSAGDPVATMIASHSP
DKDSDIRASASVLDLLGSGVGNGAIGVSYRRDLDTVSGSTSRVTLESKDT
GDFAWSLSNTTKRMTLVLSGRGRLGLRGSREGVASTVSLRSSFRLF*
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