mRNA_H-elongata_contig15370.3543.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: D7FPZ3_ECTSI (Cryptochrome DASH n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPZ3_ECTSI) HSP 1 Score: 681 bits (1757), Expect = 7.960e-241 Identity = 336/460 (73.04%), Postives = 373/460 (81.09%), Query Frame = 1
Query: 1 RRGTNRMSASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGG-QATGTTLYTHTDVCSDEICVDNAVKRALTALT------GPPVAVKEIWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQR--CQIRTPVSAPGTLRPFPS--CGDGNAASIITEVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLKFS 1347
RRGT++MSA+RCRFLLESVADL++RLR +GSDL+VR G+PEDVIP LA +LGG G TL+ HTDVCS+E V AVK AL A + G VAVKE WGNT+H + DLPFDFP +P IFTQFRK+VE + C++R PV P RP P+ D AS +PT ++LG APE+D +V F GGETAGL+RV+ YIW+EDRLR YK TRNGLLGSGFSSKFSPWLALGCLSP+TIV EIRKYE +RIANDSTYWLIFELLWRDFF YSAVKNGNSIFHLGGPR D RQ W DDAGSLEAWK GETGYP IDANMRELKASGFMSNRGRQVVASFFT+DL MDWRLGAEHFEE+LLDHDPASNWGNWNYVAGVGSDPRE RYFNIEKQAKTYD EG Y+RHWLPELAALPTTALQ +PGGITTMLRH+H +P +YPDPI PLKFS
Sbjct: 67 RRGTSKMSAARCRFLLESVADLRARLRERGSDLLVRRGHPEDVIPALAARLGGGSVAGVTLFAHTDVCSEEADVHAAVKSALAAASSAGRGGGAAVAVKEAWGNTLHDVADLPFDFPSGVPEIFTQFRKSVESKYSCKMRPPVPLPSPFRPVPTGTTQDDGEASAPGAIPTTEELGLGTAPERDARSVFPFNGGETAGLRRVQSYIWDEDRLREYKVTRNGLLGSGFSSKFSPWLALGCLSPRTIVKEIRKYETDRIANDSTYWLIFELLWRDFFRYSAVKNGNSIFHLGGPRRDTGRQRWLDDAGSLEAWKEGETGYPLIDANMRELKASGFMSNRGRQVVASFFTRDLQMDWRLGAEHFEEYLLDHDPASNWGNWNYVAGVGSDPREGRYFNIEKQAKTYDAEGAYMRHWLPELAALPTTALQ-----TPGGITTMLRHMHAIPTSVYPDPIAPLKFS 521
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: D7FPZ4_ECTSI (Cryptochrome DASH n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPZ4_ECTSI) HSP 1 Score: 639 bits (1647), Expect = 1.840e-224 Identity = 312/466 (66.95%), Postives = 365/466 (78.33%), Query Frame = 1
Query: 1 RRGTNRMSASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTAL----------TGPPVAVKEIWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAAS--IITEVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLKFSTPWKG 1362
RRGT RMSA+RCRFLLESVADLQ+RLR +GSDL++R G+PE+ IP +A +LG A+ T+Y H D+CS+E V AVK AL+ + TG V+V E+WGNT+H DLP+DFP+ LP +FT FRKAVE C+IR+PV P RP P+ NA + + +PT ++LG APE+D +VL F GGETAGL+RV+ YIWEED LR YK TRNGLLG GFSSKFSPWLALGCLSP+TIV EIRKYE +RIANDSTYWLIFELL RDFF YSAVK GN+IFHLGG R D+ RQ WRDDAG L AWK G TGYPF+DANMRELKASGFMSNRGRQVVASFFTKDL MDWRLGAEHFEE+LLD+DPASN+GNWNYVAGVG DPREDRYF++EKQA+TYD +G+Y+RHWLPELA L T ALQ S GGIT LR +H++P +YPDP+VPLKF P +G
Sbjct: 66 RRGTRRMSAARCRFLLESVADLQTRLRAKGSDLLIRRGHPENAIPAVAARLGSGASAVTVYAHPDLCSEENDVHAAVKSALSLVGSAGGVGGDATG--VSVTEVWGNTLHDPSDLPYDFPNGLPEVFTPFRKAVEPNCKIRSPVPLPSPFRPLPAGLHDNAVTPTLTVAIPTTEELGLGTAPERDARSVLHFIGGETAGLRRVQTYIWEEDHLREYKVTRNGLLGGGFSSKFSPWLALGCLSPRTIVKEIRKYETDRIANDSTYWLIFELLVRDFFRYSAVKYGNAIFHLGGSRRDSDRQTWRDDAGLLAAWKEGRTGYPFVDANMRELKASGFMSNRGRQVVASFFTKDLEMDWRLGAEHFEEYLLDYDPASNYGNWNYVAGVGFDPREDRYFSVEKQARTYDADGDYVRHWLPELAMLTTEALQ-----SAGGITATLREVHSVPTSVYPDPVVPLKFMMPKEG 524
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: A9U403_PHYPA (Cryptochrome DASH n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9U403_PHYPA) HSP 1 Score: 463 bits (1192), Expect = 1.970e-155 Identity = 226/449 (50.33%), Postives = 299/449 (66.59%), Query Frame = 1
Query: 31 RCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTALTGPP---VAVKEIWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAASIITEVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLKFSTPWKGGK 1368
R +F++ESVA+L+ LR +G DLIVR G PEDV+P +A +G T+Y H + CS+E V+ VKR L L G P + + +WG T++HLDDLPF P LP+++TQFRK VE C++R + P + P P + ++PT+ +LG + E+ + V+ F+GGETA L R++ Y W +D+L+ YKETRNG+LG+ +S+KFSPWLA GCLSP+TI E+++YE ER+ANDSTYW++FEL+WRD+F + ++K GN+IFHLGGPR ++ W + EAW+ G TGYP IDANM+EL A+GFMSNRGRQ+V SF +DLG+DWR+G E FE LLD+DP SN+GNW Y AGVG+DPREDRYF+I KQ+ TYDPEGEY+ HWLP L P N P Y PIVPLKF GGK
Sbjct: 118 RAQFIMESVANLRDNLRQRGLDLIVRQGKPEDVVPSIAKSIGAH----TVYAHKETCSEETTVETGVKRGLANLEGGPKMQIRLDFVWGGTLYHLDDLPFS-PSELPDVYTQFRKGVEYNCKVRPALKMPTQMGPLPESLSEKIGEL-GDIPTMAELGLKYR-EQSPLGVMHFEGGETAALARLQDYFWNKDQLKIYKETRNGMLGANYSTKFSPWLAHGCLSPRTIHDEVKRYETERVANDSTYWVLFELIWRDYFRFVSIKYGNAIFHLGGPRKVVGKR-WSQNRELFEAWREGRTGYPLIDANMKELAATGFMSNRGRQIVCSFLVRDLGLDWRMGGEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQSATYDPEGEYVAHWLPSLKQSPPKQ-------------------RNFPGDAYLRPIVPLKFGM-GSGGK 538
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: A0A6I9RMC3_ELAGV (Cryptochrome DASH n=2 Tax=Arecaceae TaxID=4710 RepID=A0A6I9RMC3_ELAGV) HSP 1 Score: 456 bits (1173), Expect = 2.850e-152 Identity = 232/457 (50.77%), Postives = 301/457 (65.86%), Query Frame = 1
Query: 7 GTNRMSASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTALT---GPPVAVKE-------IWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAASIITEVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLKFS 1347
G + A R +FL+ES+ADL+ L G DL+VR G PED++P +A LG T+Y + CS+E+ V+ V+R L + G K IWG+TM+H+DDLPF+ + LP+++TQFRKAVE +C IR+ P +L P PS G + S +PTL+QLG+ EK + F GGE A L RV +Y WE D LR YKETRNG+LG +S+KFSPWLA G LSP+ I E+++YE++R+ANDSTYW++FEL+WRD+F + ++KNGNSIFHLGGPR + W D E+W+ G TGYP IDANM+EL +GFMSNRGRQ+V SF +D+G+DWR+GAE FE LLD+DPASN+GNW Y AGVG+DPREDRYF+I KQAKTYDPEGEY+ +WLPEL ALP + N P + Y +VPLKF
Sbjct: 130 GFPKTGAFRAQFLIESLADLKKNLMKHGLDLLVRHGKPEDILPSVAKALGAH----TVYAQKESCSEELLVEELVRRGLHQVVIHEGESSKQKSVNPKLQLIWGSTMYHIDDLPFEAKN-LPDVYTQFRKAVESKCSIRSCFKLPASLGPLPS-GSLDEISGQGTIPTLEQLGYN---EKKFERGMHFVGGENAALGRVHEYFWENDMLRVYKETRNGMLGPDYSTKFSPWLASGSLSPRYIYEEVKRYEKQRLANDSTYWVLFELIWRDYFRFLSIKNGNSIFHLGGPRKVMSK--WSQDQSLFESWRDGRTGYPLIDANMKELCTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPASNYGNWTYGAGVGNDPREDRYFSIPKQAKTYDPEGEYVAYWLPELRALP-------------------KDRRNFPGQSYIKQVVPLKFE 556
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: W7TQV2_9STRA (Cryptochrome DASH n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQV2_9STRA) HSP 1 Score: 455 bits (1171), Expect = 2.760e-151 Identity = 230/462 (49.78%), Postives = 306/462 (66.23%), Query Frame = 1
Query: 7 GTNRMSASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTALTGPPVAVKEIWGNTMHHLDDLPF-DFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFP--SCGDGNAASIITEVPTLKQLGFEPAPEK------------DEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLKFS 1347
GT + R RFLLE+V DL++RL G ++IV+ G PE +P LA L +Y H +V S+E+ V VK L+ T +E+WGN ++H+DD+PF + +P+IFTQFRKAVE + ++R + P +L+P P S + N ++++ + TL+ LGF + D +VL+FKGGETAGL R+++Y W++D L+ YKETRNG+LG +SSKFSPWLA G +SP+ I +EIRKYERER+ NDSTYWL FEL+WRDFF +SA+ GN+ F LGGP+ + ++ W+ D AWK G TGYP +DANMRELK +GFMSNRGRQ+VASF T+D+G++WRLGA FEE LLD+DP SN+GNW Y AGVGSDPREDRYF++ KQ TYDPE YI+HW PEL +P L L+P +R + +YP IVPLKF
Sbjct: 135 GTLKTGPLRARFLLEAVEDLKTRL---GGNMIVKLGKPETEVPRLAKALKVDF----VYAHREVTSEEVAVVKGVKEGLSKATEGKSQFRELWGNYLYHIDDVPFQNLKQDMPSIFTQFRKAVESKARVRKYLPKPPSLKPAPPRSTVEENTNALLSPL-TLEALGFTREEDLGPVLSYASDTRVDPSSVLMFKGGETAGLARLQEYFWDKDLLQKYKETRNGMLGPDYSSKFSPWLATGSISPRVIFAEIRKYERERVENDSTYWLFFELIWRDFFRFSAISFGNAFFKLGGPQGNPRKYPWKRDGALYHAWKEGLTGYPLVDANMRELKTTGFMSNRGRQLVASFLTRDMGLEWRLGAYWFEEVLLDYDPCSNYGNWCYAAGVGSDPREDRYFSLPKQGATYDPEARYIKHWCPELRHIPADIL-----LNPARFDGPVRAKFAVGEEVYPRQIVPLKFG 583
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: A0A6I9RLI6_ELAGV (Cryptochrome DASH n=3 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A6I9RLI6_ELAGV) HSP 1 Score: 449 bits (1155), Expect = 1.430e-149 Identity = 231/457 (50.55%), Postives = 300/457 (65.65%), Query Frame = 1
Query: 7 GTNRMSASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTALT---GPPVAVKE-------IWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAASIITEVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLKFS 1347
G + A R +FL+ES+ADL+ L G DL+VR G PED++P +A LG T+Y + CS+E+ V+ V+R L + G K IWG+TM+H+DDLPF+ + LP+++TQFRKAVE +C IR+ P +L P PS G + S +PTL+QLG+ EK + F GGE A L RV +Y WE D LR YKETRNG+LG +S+KFSPWLA G LSP+ I E+++YE++R+ANDSTYW++FEL+WRD+F + ++KNGNSIFHLG PR + W D E+W+ G TGYP IDANM+EL +GFMSNRGRQ+V SF +D+G+DWR+GAE FE LLD+DPASN+GNW Y AGVG+DPREDRYF+I KQAKTYDPEGEY+ +WLPEL ALP + N P + Y +VPLKF
Sbjct: 130 GFPKTGAFRAQFLIESLADLKKNLMKHGLDLLVRHGKPEDILPSVAKALGAH----TVYAQKESCSEELLVEELVRRGLHQVVIHEGESSKQKSVNPKLQLIWGSTMYHIDDLPFEAKN-LPDVYTQFRKAVESKCSIRSCFKLPASLGPLPS-GSLDEISGQGTIPTLEQLGYN---EKKFERGMHFVGGENAALGRVHEYFWENDMLRVYKETRNGMLGPDYSTKFSPWLASGSLSPRYIYEEVKRYEKQRLANDSTYWVLFELIWRDYFRFLSIKNGNSIFHLG-PRKVMSK--WSQDQSLFESWRDGRTGYPLIDANMKELCTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPASNYGNWTYGAGVGNDPREDRYFSIPKQAKTYDPEGEYVAYWLPELRALP-------------------KDRRNFPGQSYIKQVVPLKFE 555
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: UPI0019E3F893 (DASH family cryptochrome n=1 Tax=Synechococcales cyanobacterium C42_A2020_086 TaxID=2774344 RepID=UPI0019E3F893) HSP 1 Score: 446 bits (1146), Expect = 1.680e-149 Identity = 226/448 (50.45%), Postives = 303/448 (67.63%), Query Frame = 1
Query: 7 GTNRMSASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTALTGPPVAVKEIWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAASIITEVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRI-YPDPIVPLKFS 1347
G + A R +FLLES+ADL+ LR GSDLIVR G PE +IP+L Q + ++ H +V ++E V+ A+K+AL A T P +K+ WG+T++H DDLPFD ++P +FT FRK VE++ + + P L+ P D + E+P++ LG EP P D AVL F+GGE+AGL R++ YIWE+D LR YKETRNG+LG+ +SSKFSPWLALGCLSP+ I ++ +YE ER+ NDSTYWLIFELLWRD+F + K+GN +FH G + W+ D + W+ G+TGYP +DANMREL A+GF+SNRGRQ VASF TK+LG+DWR+GAE FE L+D+D SNWGNWNY AGVG+D R R+FNI KQAK YDP+G+Y++HWLPELA +P + +I P +T + H + + + YP P+V L S
Sbjct: 48 GFAKTGAFRAQFLLESLADLRRSLRELGSDLIVRSGKPEQIIPNLVQ----QWQISAVHYHQEVTAEEQRVEQALKKALAAQTIP---LKQFWGHTLYHPDDLPFD-QRSIPELFTAFRKQVEKQASVNPTLPGPRRLQALPEGID------VGEIPSVSDLGLEPVPP-DPRAVLPFQGGESAGLARLKHYIWEQDHLRRYKETRNGMLGANYSSKFSPWLALGCLSPRYIYEQVLQYEEERVRNDSTYWLIFELLWRDYFRFICQKHGNKVFHPSGLQ--GIDIPWKQDWQRFDLWREGQTGYPLVDANMRELAATGFISNRGRQNVASFLTKNLGIDWRMGAEWFESLLIDYDVCSNWGNWNYTAGVGNDARGFRFFNITKQAKDYDPQGKYVKHWLPELANVPIS-----KIHEPWRLTAEEQKRHQVRLGVDYPHPVVDLFIS 473
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: A0A6I5PL83_9CYAN (Cryptochrome DASH n=1 Tax=Leptolyngbya sp. SIOISBB TaxID=2607771 RepID=A0A6I5PL83_9CYAN) HSP 1 Score: 443 bits (1139), Expect = 1.980e-148 Identity = 234/441 (53.06%), Postives = 304/441 (68.93%), Query Frame = 1
Query: 31 RCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTALTGPPVAVKEIWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAASIIT-EVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRI-YPDPIVPLKFS 1347
R +FLLESVADL+ L+ +GSDLI+R G PE VIP LA+++ QA +Y H + ++E+ V+NA+ L A TG V + WG T++HLDDLPF P +P +FTQFRK VE+ + P +AP L P SI T +PTL QLG E AP+ D+ AVL F GGETAGL R++ YIW+ D L+ YK+TRNG+LG+ +SSKFS WLALGCLSP+ + ++ YE ER+ NDSTYWL+FELLWRD+F +K+G+ +F+ G R D K W+ D EAW TG+TGYP +DANMREL A+GFMSNRGRQ VASF TK+LG+DWR+GAE FE L+D+D SNWGNWNY AGVG+D R RYFNI KQ+K YDP+GEY++HWLPEL LP A ++ P ++ + + +L + + YP PIV L+ S
Sbjct: 54 RAQFLLESVADLRRSLQQRGSDLIIRWGEPETVIPALASEVNAQA----VYWHAEATAEELTVENALADKLQA-TGKKV--RTYWGATLYHLDDLPFS-PKKVPGVFTQFRKQVEKSSTVSEPFTAPKQLLTLPP-------SIKTGALPTLDQLGVE-APKFDDRAVLKFPGGETAGLTRLQAYIWDADCLKLYKQTRNGMLGANYSSKFSAWLALGCLSPRRVYQAVQAYEHERVRNDSTYWLMFELLWRDYFRLICLKHGDRVFYPSGLR-DLK-VAWQQDWPRFEAWCTGQTGYPLVDANMRELAATGFMSNRGRQNVASFLTKNLGIDWRMGAEWFESLLVDYDVCSNWGNWNYTAGVGNDARGFRYFNIPKQSKDYDPQGEYVKHWLPELQTLP-----ASKVHCPWQLSGLEQQQFSLRLGVDYPHPIVDLQKS 471
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: A0A061GIG4_THECC (Cryptochrome DASH n=5 Tax=Malvaceae TaxID=3629 RepID=A0A061GIG4_THECC) HSP 1 Score: 444 bits (1142), Expect = 1.520e-147 Identity = 222/459 (48.37%), Postives = 297/459 (64.71%), Query Frame = 1
Query: 7 GTNRMSASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTALTGPPVA-------------VKEIWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAASIITEVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLKF 1344
G + A R +F++E +ADL+ L +G DL+++ G PED++P LA G T+Y H + CS+E+ V+ V R L + P ++ IWG+TM+HLDDLP +LP+++TQFRK+VE +C IR + P +L P PS D VP+++QLG + M F GGETA L RV +Y W++D L+ YKETRNG+LG +S+KFSPWLA G LSP+ I E+++YE+ER+ANDSTYW++FEL+WRD+F + ++K GNSIFHLGGPR + W + E+W+ G TGYP IDANM+EL A+GFMSNRGRQ+V SF +D+G+DWR+GAE FE LLD+DP SN+GNW Y AGVG+DPREDRYF+I KQA+TYDPEGEY+ +WLPEL ALP R N P + Y + +VPLKF
Sbjct: 132 GFPKTGALRAQFIIECLADLKKNLMKKGLDLLIQRGKPEDILPSLAKAFGAH----TVYAHKETCSEELQVERLVTRGLRGVVLSPAQGNSTSSSSTHNPKLELIWGSTMYHLDDLPISIS-SLPDVYTQFRKSVEAKCAIRGCIRLPKSLGPAPSIDDWG------HVPSIEQLGLQSEKATKGMR---FLGGETAALSRVSEYFWKKDSLKVYKETRNGMLGPDYSTKFSPWLASGSLSPRFIYEEVKRYEKERLANDSTYWVLFELIWRDYFRFLSIKYGNSIFHLGGPRK--AERGWSQEQKLFESWRNGCTGYPLIDANMKELSATGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQTYDPEGEYVAYWLPELLALP-------------------RDKRNFPGKSYIEQVVPLKF 555
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Match: UPI00053C1400 (cryptochrome DASH, chloroplastic/mitochondrial n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C1400) HSP 1 Score: 443 bits (1140), Expect = 1.610e-147 Identity = 221/442 (50.00%), Postives = 294/442 (66.52%), Query Frame = 1
Query: 25 ASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATGTTLYTHTDVCSDEICVDNAVKRALTALTGPP---VAVKEIWGNTMHHLDDLPFDFPHALPNIFTQFRKAVEQRCQIRTPVSAPGTLRPFPSCGDGNAASIITEVPTLKQLGFEPAPEKDEMAVLLFKGGETAGLKRVRQYIWEEDRLRSYKETRNGLLGSGFSSKFSPWLALGCLSPKTIVSEIRKYERERIANDSTYWLIFELLWRDFFCYSAVKNGNSIFHLGGPRHDAKRQVWRDDAGSLEAWKTGETGYPFIDANMRELKASGFMSNRGRQVVASFFTKDLGMDWRLGAEHFEEHLLDHDPASNWGNWNYVAGVGSDPREDRYFNIEKQAKTYDPEGEYIRHWLPELAALPTTALQARRILSPGGITTMLRHLHNLPVRIYPDPIVPLK 1341
A R FL+E + DL+ L +G +L++R G PED+IP LA G T++ H + CS+E+ V+ +++AL +G P ++ IWGNTM+H+DDLPF LP+++TQFRK+VE +C +R+ P +L P PS + +VP L QL +P + M F GGETA L RV +Y W +D L+ YKETRNG+LG +S+KFSPWLALGC+SP+ I E+++YERERIAN+STYW++FEL+WRD+F + ++K GNS+FHLGGPR+ R W D EAW+ G+TGYP IDANM+EL +GFMSNRGRQ+V SF +D+G+DWR+GAE FE LLD+DP SN+GNW Y AGVG+DPREDRYF+I KQA+TYDPEGEY+ WLP+L LP + N P Y D +VPLK
Sbjct: 124 ALRAAFLMECLDDLKKNLIKRGLNLLIRNGKPEDIIPSLAKDFGAH----TVFAHKETCSEELRVERLMQKALREASGRPENGAKLQLIWGNTMYHIDDLPFAAVD-LPDVYTQFRKSVEAKCSVRSCTRVPFSLGPTPSVDNWG------DVPILGQLDIQPQEVRKGMR---FVGGETAALGRVFEYFWNKDLLKVYKETRNGMLGPDYSTKFSPWLALGCISPRLIYEEVKRYERERIANNSTYWVLFELIWRDYFKFLSIKYGNSLFHLGGPRNVQGR--WSQDKKLFEAWRDGKTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGLDWRMGAEWFETCLLDYDPCSNYGNWTYGAGVGNDPREDRYFSIPKQAQTYDPEGEYVAWWLPQLRRLP-------------------KEKRNSPGMSYIDRVVPLK 530 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15370.3543.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15370.3543.1 >prot_H-elongata_contig15370.3543.1 ID=prot_H-elongata_contig15370.3543.1|Name=mRNA_H-elongata_contig15370.3543.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=511bp MSASRCRFLLESVADLQSRLRVQGSDLIVRCGYPEDVIPDLATKLGGQATback to top mRNA from alignment at H-elongata_contig15370:287..6655- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig15370.3543.1 ID=mRNA_H-elongata_contig15370.3543.1|Name=mRNA_H-elongata_contig15370.3543.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6369bp|location=Sequence derived from alignment at H-elongata_contig15370:287..6655- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig15370:287..6655- >mRNA_H-elongata_contig15370.3543.1 ID=mRNA_H-elongata_contig15370.3543.1|Name=mRNA_H-elongata_contig15370.3543.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3066bp|location=Sequence derived from alignment at H-elongata_contig15370:287..6655- (Himanthalia elongata Himel1 dioecious)back to top |