prot_H-elongata_contig15356.3533.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15356.3533.1
Unique Nameprot_H-elongata_contig15356.3533.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length264
Homology
BLAST of mRNA_H-elongata_contig15356.3533.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 5.190e-62
Identity = 125/269 (46.47%), Postives = 168/269 (62.45%), Query Frame = 0
Query:    1 IVWDVTRFRGLNRNDLRKVVHEDIMRWLYILRLRAPGATVIMVANKCDRSMGDFSETANRVDVLVKRLLEEWQAERGLSRGLVRNITEMRLLEGVSRVSCTDYG-----GIRELVWRISAQGATIIQVPPSWDLALKVIDALRDGQEPVRAAREHLQLSRTRLRDNEGYNTVAHTFTTKAELFHVLKNIVRQVSRGVEATGQTAAVSNLTSALNGALWISEFAGKILTIDSGDLIFLDVNWLSNVLSPIMSHKLHRERFKSEALCVQRD 264
            +V D+T++ G++  DL K +H+DIMRWLY L LRAPG+TV++VANKCD S+  F+ETA R+   V+ L+  W   RGL      ++T++ LL G+SRVSC + G     G+  L+  IS Q AT I VPP+WDLAL+VI ALR    P+ AAR+ L L      D    +  A  F +K EL    +++V  +   V A    A +SN  SAL GALWIS+FAG  L +D GD IFLDV WLS  LSPI+SHKL  + F++  L ++ D
Sbjct:  149 LVVDITKYHGVD--DLDKAIHDDIMRWLYYLYLRAPGSTVVLVANKCDGSIDKFAETAERIQRRVRELVAVWHEARGLRGRSKGHVTDLTLLPGMSRVSCQEKGSPEASGLPALIALISRQAATAIHVPPAWDLALEVIGALRASCNPIAAARDKLGLPNPLPADGVA-DVHAFAFISKDELSRKWRSVVDNLRDDVPA----AMISNWESALEGALWISDFAGHTLRVDGGDGIFLDVLWLSKCLSPILSHKLKNQPFENRWLWMRDD 410          
BLAST of mRNA_H-elongata_contig15356.3533.1 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI)

HSP 1 Score: 218 bits (555), Expect = 3.360e-61
Identity = 120/264 (45.45%), Postives = 158/264 (59.85%), Query Frame = 0
Query:    1 IVWDVTRFRGLNRNDLRKVVHEDIMRWLYILRLRAPGATVIMVANKCDRSMGDFSETANRVDVLVKRLLEEWQAERGLSRGLVRNITEMRLLEGVSRVSCTDYGGIRELVWRISAQGATIIQVPPSWDLALKVIDALRDGQEPVRAAREHLQLSRTRLRDNEGYNTVAHTFTTKAELFHVLKNIVRQVSRGVEATGQTAAVSNLTSALNGALWISEFAGKILTIDSGDLIFLDVNWLSNVLSPIMSHKLHRERFKSEALCVQRD 264
            +VWDV+R  G   NDL KVV EDIM+WLY L LR PG+ V++VANKCD S+ +F  TA  V+   +R L+EWQ  R         +T++ +L+  S VSC D GG+ E++ R+ AQGAT I VPPSW LAL  +DALRD ++P  A R  L L      D E       +F T++ LF    + V+ V+  + +  +  AVS+   A+ GALWISEFAG IL +   D+IFLDV WLS  L PI+SHKL    F    L   +D
Sbjct:  464 LVWDVSRCHGKESNDLDKVVSEDIMKWLYALHLRVPGSAVLLVANKCDGSLQEFVGTAGAVESSARRQLQEWQGNRKSP-----GVTKLTILQQPSLVSCDDGGGLSEVIARVDAQGATSIVVPPSWGLALAFLDALRDSRDPEPATRRFLHLDF----DAEVGAAQGSSFMTESTLFQRWNDTVKSVAGELTSPAERMAVSDHHGAMEGALWISEFAGHILRVAHSDVIFLDVVWLSAALKPILSHKLESHFFPRSELTAMKD 718          
BLAST of mRNA_H-elongata_contig15356.3533.1 vs. uniprot
Match: A0A6H5JW02_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW02_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 2.400e-58
Identity = 118/256 (46.09%), Postives = 164/256 (64.06%), Query Frame = 0
Query:    1 IVWDVTRFRGLNRNDLRKVVHEDIMRWLYILRLRAPGATVIMVANKCDRSMGDFSETANRVDVLVKRLLEEWQAERGLSRGLVRNITEMRLLEGVSRVSCTDYGGIRELVWRISAQGATIIQVPPSWDLALKVIDALRDGQEPVRAAREHLQL-SRTRL-RDNEGYNTVAHTFTTKAELFHVLKNIVRQVSRGVEATGQTAAVSNLTSALNGALWISEFAGKILTIDSGDLIFLDVNWLSNVLSPIMSHKLHRERF 254
            +VWDV R  G   +DL +V+ +DIMRWLY+L LRAPG+TVI+VANKCD S+ DF+ TA  V+  V  L +EW+  RG S    R   +M +LE  S VSC D  G++E++ RI+AQ A  ++VPP+W LAL  +DALRD ++P +A R+ L L SR ++  D E       +F T+  L    K +V+ V   + +  +  AVS+   A+ GALWISEFAG++L + +GD +FLDV WLS  L PI+ HKL  + F
Sbjct:  302 LVWDVLRCHGKTDDDLDEVIFQDIMRWLYVLHLRAPGSTVILVANKCDGSIEDFTGTAAVVEERVAVLRKEWRKARGFSS--TRMDMDMTVLERSSLVSCLDGVGLQEMIDRIAAQSAASMRVPPAWGLALTFLDALRDSRDPQQACRDCLSLGSRPKVGADREP----GRSFFTENSLVEQWKGVVQNVEGELRSDAEKMAVSDPDGAIEGALWISEFAGQVLRVANGDGVFLDVVWLSTALKPILDHKLVHKVF 551          
BLAST of mRNA_H-elongata_contig15356.3533.1 vs. uniprot
Match: A0A0M0JEU0_9EUKA (Small gtp-binding protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JEU0_9EUKA)

HSP 1 Score: 58.2 bits (139), Expect = 6.680e-6
Identity = 67/269 (24.91%), Postives = 112/269 (41.64%), Query Frame = 0
Query:   26 RWLYILRLRAPGATVIMVANKCDRSMGDFSETANRVDVLVKRLLE---EW-QAERGLSRGLVRNITEMRLLEGVSRVSCTDYGG---------IRELVWRISAQGATIIQ-VPPSWDLALKVIDALRDGQEPVRAAREHLQLSRTRLRDNEGYNTVAHTFTTKAELFHVLKNIVRQVSRGVEATGQTAAVSNLTSALNGALWISEFAGKI---------------LTIDSGD------LIFLDVNWLSNVLSPIMSHKLHRERFKSEAL 259
            RWL  L+  AP A V  V   CDR     S  A R   + +       EW +    L +    +   +R+ E V  VSC   G          + ELV+      +++ Q +P +W LA+  + ALRDG++P+ AAR  + L  T+    +     A      A +     N   Q S G        A S +T A   +LW++E   ++               L ++ G+      +I+L  ++++ +L P++ H+L    F+ + L
Sbjct: 2988 RWLDYLQAGAPEAVVQPVITHCDRLFA--SPGAGRTHAMFENAAATQIEWVKTNIALHQSQQGDAKRLRVQERVVCVSCIAGGDASLDFLRQRLEELVFAKPPLLSSVGQMIPRTWLLAMAYLRALRDGRDPIEAARASIDLQVTKKGVADAAAQEAAHEPLPAVVASTSSNDTLQSSMG-------KARSYITLAEAHSLWLNEVVPRLANVSADKTVLDDALQLLVNQGEFFSSCGIIYLQPDYVTRLLKPLVDHRLSTAAFRKQLL 3247          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15356.3533.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K8T1_9PHAE5.190e-6246.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVX5_ECTSI3.360e-6145.45LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JW02_9PHAE2.400e-5846.09Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A0M0JEU0_9EUKA6.680e-624.91Small gtp-binding protein n=1 Tax=Chrysochromulina... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15356contigH-elongata_contig15356:3400..4735 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15356.3533.1mRNA_H-elongata_contig15356.3533.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15356 3398..4735 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15356.3533.1 ID=prot_H-elongata_contig15356.3533.1|Name=mRNA_H-elongata_contig15356.3533.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=264bp
IVWDVTRFRGLNRNDLRKVVHEDIMRWLYILRLRAPGATVIMVANKCDRS
MGDFSETANRVDVLVKRLLEEWQAERGLSRGLVRNITEMRLLEGVSRVSC
TDYGGIRELVWRISAQGATIIQVPPSWDLALKVIDALRDGQEPVRAAREH
LQLSRTRLRDNEGYNTVAHTFTTKAELFHVLKNIVRQVSRGVEATGQTAA
VSNLTSALNGALWISEFAGKILTIDSGDLIFLDVNWLSNVLSPIMSHKLH
RERFKSEALCVQRD
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