prot_H-elongata_contig10421.353.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig10421.353.1
Unique Nameprot_H-elongata_contig10421.353.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length265
Homology
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BLAST of mRNA_H-elongata_contig10421.353.1 vs. uniprot
Match: D7G2H6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H6_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 3.860e-30
Identity = 86/209 (41.15%), Postives = 118/209 (56.46%), Query Frame = 0 
Query:   95 PSIPRSLLRGIKRRGASLSSLFWINSN-----VSESGFSDNTR------------------------------GENEDKRGGDDSRNGDGPPVPNGK--GDSNNTSSGIMEGGTDG-DINFLVPSPLAVVEFGEILFEVSRKEPRQTLLTAVRQMDEHPGILTYGQAMGGWGKLSVSSSALYLDDLPVPFLSTESIIWEGLFARGEMGG 265
            P  PR++ +G+++ GASLSSL    S+     +S+ G  DN R                              GE  D+ GG     G G     G+  GD  + +    +   DG   N     PLAV+  GEI FE+SRKEP+ TLL AVR++DEHPG +TYGQAMGGWGKLS+SS+A+YLD LPVP+L+ ++++ +GLFARG++ G
Sbjct: 1279 PQHPRAIFKGLRQSGASLSSLLGFGSSGSGSDLSDHGGGDNARPTTRRSSTSPAATGADTPKRRSKRITQVPEGEGGDEEGGVGDGRGFGIDTNRGRNVGDRVSETESARKARGDGFGGNEARAKPLAVLTLGEISFELSRKEPQPTLLAAVRELDEHPGPVTYGQAMGGWGKLSLSSTAVYLDGLPVPYLTADNVVVDGLFARGKLYG 1487
[Close]
BLAST of mRNA_H-elongata_contig10421.353.1 vs. uniprot
Match: A0A6H5L9Y5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9Y5_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 5.570e-23
Identity = 82/220 (37.27%), Postives = 114/220 (51.82%), Query Frame = 0 
Query:   80 GGKKGGTTGAGADSTPSIPRSLLRGIKRRGASLSSLFWINSN-----VSESGFSDNTR------------------------------GENEDKRGGDDSRNGDGPPVPNGK--GDSNNTSSGIMEGGTDG-DINFLVPSPLAVVEFGEILFEVSRKEPRQTLLTAVRQMDEHPGILTYGQAMGGWGKLSVSSSALYLDDLPVPFLSTESIIWEGLFARG 261
            GG+ G +  + +   P  PR +++G+++ GASLSSL    S+     +S+ G  DN R                              GE  D+ GG     G G     G+  GD  + +    E   DG   N     PLAV+  GEI FE        TLL AVR++DEHPG +TYGQ MGGWGKLS+SS+A+YLD LPVP+++ ++++ +GLFARG
Sbjct: 1576 GGEGGNSINSSSMPWPQHPRMMVKGLRQSGASLSSLLGFGSSGSGSDLSDHGGRDNARSTSRRSSASPAATGADTPKRRSKRITQVPAGEGGDEAGGFGDGRGFGIDKNRGRNVGDRISETESAREARGDGFGGNEARAKPLAVLTLGEISFE-------PTLLAAVRELDEHPGPVTYGQTMGGWGKLSLSSTAVYLDGLPVPYVTADNVVVDGLFARG 1788
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10421.353.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2H6_ECTSI3.860e-3041.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L9Y5_9PHAE5.570e-2337.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10421contigH-elongata_contig10421:4158..5800 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10421.353.1mRNA_H-elongata_contig10421.353.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig10421 4158..5800 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig10421.353.1 ID=prot_H-elongata_contig10421.353.1|Name=mRNA_H-elongata_contig10421.353.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=265bp
PADSCATTIALGNFHIRVEGDSLSSPPSVPCSTHPVTSPSSPIPRPHRHT
TPVMIRGTDGGNSIRNTPTSRARSIDSQSGGKKGGTTGAGADSTPSIPRS
LLRGIKRRGASLSSLFWINSNVSESGFSDNTRGENEDKRGGDDSRNGDGP
PVPNGKGDSNNTSSGIMEGGTDGDINFLVPSPLAVVEFGEILFEVSRKEP
RQTLLTAVRQMDEHPGILTYGQAMGGWGKLSVSSSALYLDDLPVPFLSTE
SIIWEGLFARGEMGG
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