mRNA_H-elongata_contig153446.3528.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig153446.3528.1 vs. uniprot
Match: A0A6H5K075_9PHAE (DUF4470 domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K075_9PHAE) HSP 1 Score: 70.5 bits (171), Expect = 8.420e-13 Identity = 33/49 (67.35%), Postives = 42/49 (85.71%), Query Frame = 1
Query: 10 SRFDFIDSADLSDKLGVLNVITAASPLLKLSPHAILRTDLRRSGASRKR 156
+RFD IDS+ L++ LG+LNV+ A SPLLK SPHA++RTDLRRSG +RKR
Sbjct: 503 ARFDLIDSSYLANNLGILNVVMATSPLLKPSPHAVVRTDLRRSGPARKR 551
BLAST of mRNA_H-elongata_contig153446.3528.1 vs. uniprot
Match: A0A423WKJ4_9PEZI (MYND-type zinc finger protein samB n=1 Tax=Valsa malicola TaxID=356882 RepID=A0A423WKJ4_9PEZI) HSP 1 Score: 49.7 bits (117), Expect = 1.830e-5 Identity = 23/49 (46.94%), Postives = 34/49 (69.39%), Query Frame = 1
Query: 13 RFDFIDSADLSDKLGVLNVITAASPLLKLSPHAILRTDLRRSGASRKRE 159
+FD ID+++LSD LG LN++ +ASPLLK +P A L T+ G +R+
Sbjct: 367 QFDVIDTSNLSDYLGALNIVVSASPLLKATPWATLYTETMEKGREGERQ 415
BLAST of mRNA_H-elongata_contig153446.3528.1 vs. uniprot
Match: A0A4V1ISJ4_9FUNG (Uncharacterized protein n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4V1ISJ4_9FUNG) HSP 1 Score: 48.9 bits (115), Expect = 3.400e-5 Identity = 22/42 (52.38%), Postives = 30/42 (71.43%), Query Frame = 1
Query: 1 PIQSRFDFIDSADLSDKLGVLNVITAASPLLKLSPHAILRTD 126
P + FD ID+++L+D LG+LN++ A PLLK HAIL TD
Sbjct: 369 PAPTAFDVIDTSNLTDHLGLLNILVATGPLLKPVLHAILHTD 410
BLAST of mRNA_H-elongata_contig153446.3528.1 vs. uniprot
Match: D8PPJ6_SCHCM (MYND-type domain-containing protein (Fragment) n=1 Tax=Schizophyllum commune (strain H4-8 / FGSC 9210) TaxID=578458 RepID=D8PPJ6_SCHCM) HSP 1 Score: 48.9 bits (115), Expect = 3.430e-5 Identity = 24/56 (42.86%), Postives = 37/56 (66.07%), Query Frame = 1
Query: 1 PIQSRFDFIDSADLSDKLGVLNVITAASPLLKLSPHAILRTDLRRSGASRKREYAL 168
P F I++++L+D +G+LNV+T+A+PLL+ SP + L T+ AS K YAL
Sbjct: 348 PAPVSFSVIETSNLADHIGLLNVLTSAAPLLRKSPTSTLHTNSLHPSASTKSGYAL 403
BLAST of mRNA_H-elongata_contig153446.3528.1 vs. uniprot
Match: A0A423XKJ3_9PEZI (Carrier domain-containing protein n=1 Tax=Cytospora leucostoma TaxID=1230097 RepID=A0A423XKJ3_9PEZI) HSP 1 Score: 48.9 bits (115), Expect = 3.450e-5 Identity = 23/49 (46.94%), Postives = 33/49 (67.35%), Query Frame = 1
Query: 13 RFDFIDSADLSDKLGVLNVITAASPLLKLSPHAILRTDLRRSGASRKRE 159
FD ID+++LSD LG LN++ +ASPLLK +P A L T+ G +R+
Sbjct: 267 NFDVIDTSNLSDHLGALNILVSASPLLKHAPWATLYTETMEKGTDGERQ 315
BLAST of mRNA_H-elongata_contig153446.3528.1 vs. uniprot
Match: K5VZ92_AGABU (MYND-type domain-containing protein (Fragment) n=3 Tax=Agaricus bisporus TaxID=5341 RepID=K5VZ92_AGABU) HSP 1 Score: 48.5 bits (114), Expect = 4.700e-5 Identity = 23/37 (62.16%), Postives = 30/37 (81.08%), Query Frame = 1
Query: 16 FDFIDSADLSDKLGVLNVITAASPLLKLSPHAILRTD 126
FD ID+++LSD LG+LNV+ AA PLL+ SP AIL T+
Sbjct: 357 FDVIDTSNLSDHLGLLNVLIAAVPLLQKSPRAILNTN 393
BLAST of mRNA_H-elongata_contig153446.3528.1 vs. uniprot
Match: D8LNQ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ6_ECTSI) HSP 1 Score: 48.1 bits (113), Expect = 6.390e-5 Identity = 22/45 (48.89%), Postives = 34/45 (75.56%), Query Frame = 1
Query: 13 RFDFIDSADLSDKLGVLNVITAASPLLKLSPHAILRTDLRRSGAS 147
+FD I++++L++ LG +NV+ A+SPLLK PHA+L T L S A+
Sbjct: 339 QFDVINTSNLAEHLGTVNVLVASSPLLKTLPHAVLLTSLLASTAT 383
BLAST of mRNA_H-elongata_contig153446.3528.1 vs. uniprot
Match: A0A2T2NIJ6_CORCC (DUF4470 domain-containing protein n=1 Tax=Corynespora cassiicola Philippines TaxID=1448308 RepID=A0A2T2NIJ6_CORCC) HSP 1 Score: 48.1 bits (113), Expect = 6.420e-5 Identity = 20/40 (50.00%), Postives = 31/40 (77.50%), Query Frame = 1
Query: 10 SRFDFIDSADLSDKLGVLNVITAASPLLKLSPHAILRTDL 129
+ FD ID+++L+D LG+LN++ A SPLL L P + LRT++
Sbjct: 350 TTFDVIDTSNLADHLGILNLLAATSPLLSLQPTSTLRTEI 389
BLAST of mRNA_H-elongata_contig153446.3528.1 vs. uniprot
Match: A0A2G8RZW4_9APHY (MYND-type domain-containing protein n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RZW4_9APHY) HSP 1 Score: 47.8 bits (112), Expect = 8.800e-5 Identity = 21/39 (53.85%), Postives = 32/39 (82.05%), Query Frame = 1
Query: 10 SRFDFIDSADLSDKLGVLNVITAASPLLKLSPHAILRTD 126
SRFD ID+++LSD +G+LN++ AA+PLL SP ++L T+
Sbjct: 366 SRFDVIDTSNLSDHIGMLNMLLAAAPLLAGSPSSVLYTE 404 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig153446.3528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig153446.3528.1 >prot_H-elongata_contig153446.3528.1 ID=prot_H-elongata_contig153446.3528.1|Name=mRNA_H-elongata_contig153446.3528.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=56bp PIQSRFDFIDSADLSDKLGVLNVITAASPLLKLSPHAILRTDLRRSGASRback to top mRNA from alignment at H-elongata_contig153446:778..945- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig153446.3528.1 ID=mRNA_H-elongata_contig153446.3528.1|Name=mRNA_H-elongata_contig153446.3528.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=168bp|location=Sequence derived from alignment at H-elongata_contig153446:778..945- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig153446:778..945- >mRNA_H-elongata_contig153446.3528.1 ID=mRNA_H-elongata_contig153446.3528.1|Name=mRNA_H-elongata_contig153446.3528.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=336bp|location=Sequence derived from alignment at H-elongata_contig153446:778..945- (Himanthalia elongata Himel1 dioecious)back to top |