prot_H-elongata_contig15344.3526.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15344.3526.1
Unique Nameprot_H-elongata_contig15344.3526.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length513
Homology
BLAST of mRNA_H-elongata_contig15344.3526.1 vs. uniprot
Match: D7G624_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G624_ECTSI)

HSP 1 Score: 411 bits (1056), Expect = 2.210e-133
Identity = 276/612 (45.10%), Postives = 348/612 (56.86%), Query Frame = 0
Query:    1 MEQQLRAGITPTLPDSSKARADL-ARSLVEEDEGAAAADVSSSIIIPGIVKCPAAAKPRPLSMPTLRRESVVGLKASNRPSEKVSKKRGRPPLDRGEVDVGVAVPGSTGK----------LWMVVKQWPFEEREGRGGKEGVEKPPFFKELWMMMATFGDPRGTIVCRCQGRGKKRCPCIEGIVAMEALVKPFGVRLVAICREWSNLRQFKLNHLRQAMPGEMCEFLAWKEAHSTR--KNAAEKHAGVQLDDDDDXXXXXXXXAVD------------------------------------DPCGDPEK-----------------------------------------TNADRMGVQKQRALDG------QGTDDKKSWASEEVGSGE-HEWSAEEEEVAARIEHRRRFADEITLQMPEEEYLHTFSDFRRAFFMVGKRR----GLKGKSTPGSRAYLAEYLGIERDCPERNDKKLLQALAYMMYDFVGVVVETAIRKRTGGRLVSISSEPMLSAREITAAGASLPPLLDRAQRVHVRSIRANNPEGISHNKPLTSFPVGLEYRGDPLRWPRNKIEKGRLLVEGGEVVDACDGKLAEEAMEILETDFAD 511
            MEQQLR+GITPTLP S+  RA L A SLV  D   ++                       ++       SV        PS  ++KKRGR     G    G+ +PGS G+           ++VVK+W F E++ RG  E VEKPPFF ELWMMMA FGDPRG + C+C G G+K CPCIEG+ AME LVK  G+R+V +CREWS   + ++ H+  AMPGEM E++AWKEAHS R  K+  E+ A ++L D DDXXXXXXXX                                       +P G+                                            T+++    QKQ+ L        Q  +DK+S      G GE  EW+AEEEEVA+RIE+R+RFADE T+ M EE+Y+ TF +FR+AFF+ G+ R    G K K  PGSR +LA YL ++ D  E  DKKLL+ALA+MMYD+VG V+E AIRKRTGGRLV   S+ MLSA EITAAGA+LPPL  R QR +VR+ RA NPEGI++N+PL+ F +GLE+RGDPLRWPRN IE GR+LV GGEVVD  D  LAEEA  + E+DFAD
Sbjct:   82 MEQQLRSGITPTLPTSADDRAGLLASSLVPNDSSGSSXXXXXXXXXXXXXXXXXXXXXXXITSLDSSSSSVSSFVVPITPS--LTKKRGR---ISGR---GIVLPGSIGRGRGGAAAPELSFVVVKEWAFSEKKKRG-VEVVEKPPFFSELWMMMAAFGDPRGNVTCKCSGHGEKACPCIEGVAAMEKLVKAVGIRMVHVCREWSAPSRIRVKHIWMAMPGEMREYMAWKEAHSKRGTKSEVERGADLRLSDVDDXXXXXXXXXXXXXXXXXDVAHKGGMRVGGNXXXXXXXXXXXXXXSSIEPTGEIASGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAMAGVTHSEATPWQKQQILPKNKHRKQQHEEDKRSDGD---GGGEAREWAAEEEEVASRIENRKRFADERTVGMEEEDYVKTFFEFRKAFFLKGRCRTNPHGDKKKHPPGSRPFLASYLELQ-DSQEAKDKKLLEALAFMMYDYVGRVIEGAIRKRTGGRLVCDDSDAMLSAEEITAAGAALPPLSGREQRENVRAFRAANPEGIAYNRPLSRFTIGLEHRGDPLRWPRNTIEGGRMLVGGGEVVDTNDKSLAEEATALFESDFAD 680          
BLAST of mRNA_H-elongata_contig15344.3526.1 vs. uniprot
Match: A0A6H5L1L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1L2_9PHAE)

HSP 1 Score: 405 bits (1042), Expect = 3.880e-131
Identity = 268/617 (43.44%), Postives = 343/617 (55.59%), Query Frame = 0
Query:    1 MEQQLRAGITPTLPDSSKARADL-ARSLVEEDEGAAAADVSSSIIIPGIVKCPAAAKPRPLSMPTLRRESVVGLKASNRPSEKVSKKRGRPPLDRGEVDVGVAVPGSTGK----------LWMVVKQWPFEEREGRGGKEGVEKPPFFKELWMMMATFGDPRGTIVCRCQGRGKKRCPCIEGIVAMEALVKPFGVRLVAICREWSNLRQFKLNHLRQAMPGEMCEFLAWKEAHSTR--KNAAEKHAGVQLDDDDDXXXXXXXXAVD--------------------------DPCGDPEKTNADRMGVQKQ------------------------------------------RALDGQGTDDKKSWASEEV---------------------GSGEHEWSAEEEEVAARIEHRRRFADEITLQMPEEEYLHTFSDFRRAFFMVGKRRGL----KGKSTPGSRAYLAEYLGIERDCPERNDKKLLQALAYMMYDFVGVVVETAIRKRTGGRLVSISSEPMLSAREITAAGASLPPLLDRAQRVHVRSIRANNPEGISHNKPLTSFPVGLEYRGDPLRWPRNKIEKGRLLVEGGEVVDACDGKLAEEAMEILETDFAD 511
            MEQQLR+GITPTLP S+  RA L A SLV  D   ++++                      +       SV        PS  ++KKRGR     G    G+ +PGS G+           ++VV +W F E++ RG  E V+KPPFF ELWMMMA FGDPRG + C+C G G+K CPCIEG+ AME LVK  G+R+V +CREWS   + ++ H+   MPGEM E++AWKEAHS R  K+  E+ A ++L D DDXXXXXXXX                             D  GD    N  +     +                                          +A+ G    +   W  + +                     G+   EW+AEEEEVA+RIE+R+RFADE T+ M EE+Y+ TF +FR+AFF+ G+ R      + K+ PGSR +LA YL ++ D  E  DKKLL+ALA+MMYD+VG V+E AIRKRTGGRLV   S+ MLSA EITAAGA+LPPL  R QR +VR+ RA NPEGI++N+PL+ FP+GLEYRGDPLRWPRN IE GR+LV GGEVVD  D  LAEEAM + E+DFAD
Sbjct:   86 MEQQLRSGITPTLPTSADDRAGLLASSLVPNDSSGSSSNSMXXXXXXXXXXXXXXXXXXXTTSLGNSSSSVSSFVVPITPS--LTKKRGR---TSGR---GIVLPGSIGRGGGGAAAPELSFVVVNEWAFSEKKKRG-VEVVKKPPFFSELWMMMAAFGDPRGNVTCKCSGHGEKACPCIEGVAAMEKLVKAVGIRMVHVCREWSAPSRIRVKHIWMTMPGEMREYMAWKEAHSKRGTKSEVERGADLRLSDVDDXXXXXXXXXXXXXXXXXXXXXXXXNYVAHKGGMNVRGDSNGDAPARNKGKGASSTEPNGEITSGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKAMAGVTHGEATPWQKQHILPKNKHRKQQHEEEKRSDGDGGAEAREWAAEEEEVASRIENRKRFADERTVGMEEEDYVKTFFEFRKAFFLKGRCRTNPHRDRKKNPPGSRPFLASYLELQ-DPQEAKDKKLLEALAFMMYDYVGRVIEGAIRKRTGGRLVCDDSDAMLSAEEITAAGAALPPLSGREQRENVRAFRAANPEGIAYNRPLSRFPIGLEYRGDPLRWPRNTIEGGRMLVGGGEVVDTNDKSLAEEAMALFESDFAD 692          
BLAST of mRNA_H-elongata_contig15344.3526.1 vs. uniprot
Match: A0A836CHP8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHP8_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.680e-13
Identity = 61/177 (34.46%), Postives = 86/177 (48.59%), Query Frame = 0
Query:  305 VAARIEHRRRFADEITLQMPEEEYLHTFSDFRRAFFMVGKR--RGLKGKSTP---GSRAYLAEYLGIERDCPERNDKKLLQALAYMMYDFVGVVVETAIRKRT---GGRLVSISSEPMLSAREITAAGASLPPLLDRAQRVHVRSIRANNPEGISHNKPLTSFPVGLEYRGDPLRWP 473
            V  R+E R  FAD  T+QM    Y  TF+  R AFF+  K   +  +GK+ P   GS AY   +LG       R  +  ++ALAY++YD +GV++E AIR+R    G  L S+ S+  L   E+  A + +P L+       +R I             L   P G+ Y GDP  WP
Sbjct:  297 VRGRVEQRMAFADTRTVQMSGAAY-DTFAKQRHAFFVTYKHVAKDREGKAKPIGYGSDAYFLRWLGFPST---RVRRAAIKALAYLVYDHIGVIIEEAIRRRANAPGDALRSLPSDRPLRTPELQQAQSQIPRLVLPPHHDGLRGIA------------LPKLPTGIRYVGDPRAWP 457          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15344.3526.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G624_ECTSI2.210e-13345.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1L2_9PHAE3.880e-13143.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CHP8_9STRA2.680e-1334.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15344contigH-elongata_contig15344:1652..4574 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15344.3526.1mRNA_H-elongata_contig15344.3526.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15344 1625..5176 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15344.3526.1 ID=prot_H-elongata_contig15344.3526.1|Name=mRNA_H-elongata_contig15344.3526.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=513bp
MEQQLRAGITPTLPDSSKARADLARSLVEEDEGAAAADVSSSIIIPGIVK
CPAAAKPRPLSMPTLRRESVVGLKASNRPSEKVSKKRGRPPLDRGEVDVG
VAVPGSTGKLWMVVKQWPFEEREGRGGKEGVEKPPFFKELWMMMATFGDP
RGTIVCRCQGRGKKRCPCIEGIVAMEALVKPFGVRLVAICREWSNLRQFK
LNHLRQAMPGEMCEFLAWKEAHSTRKNAAEKHAGVQLDDDDDDDDEMDDD
AVDDPCGDPEKTNADRMGVQKQRALDGQGTDDKKSWASEEVGSGEHEWSA
EEEEVAARIEHRRRFADEITLQMPEEEYLHTFSDFRRAFFMVGKRRGLKG
KSTPGSRAYLAEYLGIERDCPERNDKKLLQALAYMMYDFVGVVVETAIRK
RTGGRLVSISSEPMLSAREITAAGASLPPLLDRAQRVHVRSIRANNPEGI
SHNKPLTSFPVGLEYRGDPLRWPRNKIEKGRLLVEGGEVVDACDGKLAEE
AMEILETDFADC*
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