mRNA_H-elongata_contig153355.3523.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig153355.3523.1 vs. uniprot
Match: A0A6H5K972_9PHAE (DDE_Tnp_1_7 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K972_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 4.070e-18 Identity = 51/112 (45.54%), Postives = 65/112 (58.04%), Query Frame = 1
Query: 169 KKGEMSFARFGFLTFTQWKDSKLVRFLSTIHVTMGDFVP--------LPGGRKETLLQPSCRLNYNTYMGGVDLADQLNGYYQSLHRSKYFFWRRMFEQKFMQASSNAWLLY 480
++G FAR + +W DSK V +ST HV D+ P L G + LQP RL+Y MGGVD+ADQ +Q H+ K FFWRR+F+QKF QA SNA+LLY
Sbjct: 253 REGRHVFARSNHIVIIEWVDSKTVHLMSTKHVFDEDWNPVLQTKRAALNDGNSVSSLQPLARLDYVVRMGGVDVADQRLMTHQHGHKQKTFFWRRVFDQKFAQAISNAYLLY 364
BLAST of mRNA_H-elongata_contig153355.3523.1 vs. uniprot
Match: UPI001EEA2101 (piggyBac transposable element-derived protein 4-like isoform X1 n=3 Tax=Silurus meridionalis TaxID=175797 RepID=UPI001EEA2101) HSP 1 Score: 85.1 bits (209), Expect = 3.270e-16 Identity = 61/169 (36.09%), Postives = 89/169 (52.66%), Query Frame = 1
Query: 1 LLQSGTYVAMDNFFSSPVLFLCLLWHGVFAVGTLMDIHRGVCQAIWYWTTTKQTL*KKGEMSFARFGFLTFTQWKDSKLVRFLSTIHV-----TMGDFVPLPGGRKETL--LQPSCRLNYNTYMGGVDLADQLNGYYQSLHRSKYFFWRRMFEQKFMQ-ASSNAWLLYR 483
+L +G + +DNF++SP LF LL +FA GT+ + G + I T +G + R G L F +WKD+K V STIH T+ V G+ + L P C + YN YMGGVD++D L GYY LH+++ W + F F+ A NA++L+R
Sbjct: 485 MLGTGYKLFVDNFYTSPELFQDLLKKNIFACGTIRPSNAGYPKTI---TNKLPNKAPRGTHRWLREGNLLFVEWKDTKEVHMCSTIHKGTESSTVQRKVKGKDGQWKNLDLPVPECVVEYNRYMGGVDVSDALIGYYTVLHKTRK--WYQSFFYHFVDIAIVNAFILHR 648
BLAST of mRNA_H-elongata_contig153355.3523.1 vs. uniprot
Match: A0A6Q2X0X8_ESOLU (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Esox lucius TaxID=8010 RepID=A0A6Q2X0X8_ESOLU) HSP 1 Score: 84.0 bits (206), Expect = 7.940e-16 Identity = 55/144 (38.19%), Postives = 76/144 (52.78%), Query Frame = 1
Query: 1 LLQSGTYVAMDNFFSSPVLFLCLLWHGVFAVGTLMDIHRGVCQAIWYWTTTKQTL*KKGEMSFARFGFLTFTQWKDSKLVRFLSTIHV-----TMGDFVPLPGG--RKETLLQPSCRLNYNTYMGGVDLADQLNGYYQSLHRSK 411
LL G ++ MDNF++SP LFL LL A GT+ G + + K K+GE+ + R G L F +W D++ V STIH T+ V G +E++ P L YN YMGGVD++D L GYY LH++K
Sbjct: 334 LLGQGYHIFMDNFYTSPTLFLDLLTKKTLACGTIRTNRIGFPKTKINDLSRKA---KRGEIRWLRNGKLLFVKWMDTREVTMCSTIHTAYSNDTVNRRVKNADGVWGRESIPIPKAVLEYNKYMGGVDVSDALIGYYNVLHKTK 474
BLAST of mRNA_H-elongata_contig153355.3523.1 vs. uniprot
Match: A0A7J5XTX8_DISMA (DDE_Tnp_1_7 domain-containing protein (Fragment) n=2 Tax=Notothenioidei TaxID=8205 RepID=A0A7J5XTX8_DISMA) HSP 1 Score: 83.6 bits (205), Expect = 1.080e-15 Identity = 56/168 (33.33%), Postives = 89/168 (52.98%), Query Frame = 1
Query: 4 LQSGTYVAMDNFFSSPVLFLCLLWHGVFAVGTLMDIHRGVCQAIWYWTTTKQTL*KKGEMSFARFGFLTFTQWKDSKLVRFLSTIH-------VTMGDFVPLPGG-RKETLLQPSCRLNYNTYMGGVDLADQLNGYYQSLHRSKYFFWRRMFEQKFMQASSNAWLLYR 483
L G ++ +DNF++SP LF L G A GT D + V ++ T+K +G + + R L F +W D++ V STIH VT + G +KE ++ P C + YN YMGGVDL+DQL YY S+H+ ++R + A++N+++L++
Sbjct: 345 LGRGYHLFVDNFYTSPKLFTDLFARGFVACGTFRDNRKNVPKSKLNALTSKSP---RGSIRWLREKELLFVKWMDTREVSVCSTIHQAFNGDTVTRNVYAKETGKWQKENIMAPRCVVEYNKYMGGVDLSDQLIQYY-SVHKRSNRWYRTLLYHFIDIAATNSYILHK 508
BLAST of mRNA_H-elongata_contig153355.3523.1 vs. uniprot
Match: A0A7J5XBP4_DISMA (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Dissostichus mawsoni TaxID=36200 RepID=A0A7J5XBP4_DISMA) HSP 1 Score: 83.6 bits (205), Expect = 1.180e-15 Identity = 56/168 (33.33%), Postives = 89/168 (52.98%), Query Frame = 1
Query: 4 LQSGTYVAMDNFFSSPVLFLCLLWHGVFAVGTLMDIHRGVCQAIWYWTTTKQTL*KKGEMSFARFGFLTFTQWKDSKLVRFLSTIH-------VTMGDFVPLPGG-RKETLLQPSCRLNYNTYMGGVDLADQLNGYYQSLHRSKYFFWRRMFEQKFMQASSNAWLLYR 483
L G ++ +DNF++SP LF L G A GT D + V ++ T+K +G + + R L F +W D++ V STIH VT + G +KE ++ P C + YN YMGGVDL+DQL YY S+H+ ++R + A++N+++L++
Sbjct: 583 LGRGYHLFVDNFYTSPKLFTDLFARGFVACGTFRDNRKNVPKSKLNALTSKSP---RGSIRWLREKELLFVKWMDTREVSVCSTIHQAFNGDTVTRNVYAKETGKWQKENIMAPRCVVEYNKYMGGVDLSDQLIQYY-SVHKRSNRWYRTLLYHFIDIAATNSYILHK 746
BLAST of mRNA_H-elongata_contig153355.3523.1 vs. uniprot
Match: A0A671SE46_9TELE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=A0A671SE46_9TELE) HSP 1 Score: 82.8 bits (203), Expect = 1.980e-15 Identity = 60/168 (35.71%), Postives = 88/168 (52.38%), Query Frame = 1
Query: 1 LLQSGTYVAMDNFFSSPVLFLCLLWHGVFAVGTLMDIHRGVCQAIWYWTTTKQTL*KKGEMSFARFGFLTFTQWKDSKLVRFLSTIHVTM-GDFVPL------PGGRKETLLQPSCRLNYNTYMGGVDLADQLNGYYQSLHRSKYFFWRRMFEQKFMQ-ASSNAWLLY 480
LL G ++ MDNF++S LF LL A GT+ +G + + K K+GE+ + R+G L F +W D++ V STIH + GD V G R+ + P + YN YMGGVDL+D L GYY LH++K W + F F+ A N+++L+
Sbjct: 306 LLGQGYHIFMDNFYTSLTLFSDLLLKYTQACGTIRPNRQGFPKTKVNDLSRKA---KRGEIRWIRYGKLLFVKWMDTREVTMCSTIHKSYNGDTVNRRVKTAESGWRRHQVPVPVAVMEYNKYMGGVDLSDALIGYYNVLHKTKK--WYKTFFFHFIDIAVVNSYILH 468
BLAST of mRNA_H-elongata_contig153355.3523.1 vs. uniprot
Match: A0A3P8ZAY9_ESOLU (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Esox lucius TaxID=8010 RepID=A0A3P8ZAY9_ESOLU) HSP 1 Score: 81.6 bits (200), Expect = 4.510e-15 Identity = 54/144 (37.50%), Postives = 76/144 (52.78%), Query Frame = 1
Query: 1 LLQSGTYVAMDNFFSSPVLFLCLLWHGVFAVGTLMDIHRGVCQAIWYWTTTKQTL*KKGEMSFARFGFLTFTQWKDSKLVRFLSTIHV-----TMGDFVPLPGG--RKETLLQPSCRLNYNTYMGGVDLADQLNGYYQSLHRSK 411
LL G ++ MDNF++SP LFL LL + GT+ G + + K K+GE+ + R G L F +W D++ V STIH T+ V G +E++ P L YN YMGGVD++D L GYY LH++K
Sbjct: 202 LLGQGYHIFMDNFYTSPTLFLDLLTKKTQSCGTIRTNRIGFPKTKINDLSRKA---KRGEIRWLRNGKLLFVKWMDTREVTMCSTIHTAYSNDTVNRRVKNADGVWGRESIPIPKAVLEYNKYMGGVDVSDALIGYYNVLHKTK 342
BLAST of mRNA_H-elongata_contig153355.3523.1 vs. uniprot
Match: A0A6H5JC56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC56_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 5.570e-15 Identity = 55/160 (34.38%), Postives = 74/160 (46.25%), Query Frame = 1
Query: 1 LLQSGTYVAMDNFFSSPVLFLCLLWHGVFAVGTLMDIHRGVCQAIWYWTTTKQTL*KKGEMSFARFGFLTFTQWKDSKLVRFLSTIHVTMGDFVPLPGGRKETLLQPSCRLNYNTYMGGVDLADQLNGYYQSLHRSKYFFWRRMFEQKFMQASSNAWLLY 480
++ SG VAMDNFF+ L L +FAV T GV + + W+ + ++G+M +R T D G K + QP R + MGGVD+ADQ G + HR FFWRR+F+QKF QA SNAW L+
Sbjct: 222 IIGSGVTVAMDNFFTGAALLRYLATRDIFAVRTPRGNRTGVDLSNYIWSKEGMKVTERGQM------------------LRPARTSSKRAADH----NGEKVSSSQPLARKEHVKNMGGVDVADQWLGAHAHTHRPMTFFWRRVFDQKFSQAVSNAWFLF 359
BLAST of mRNA_H-elongata_contig153355.3523.1 vs. uniprot
Match: A0A8M3AW26_DANRE (piggyBac transposable element-derived protein 4-like n=1 Tax=Danio rerio TaxID=7955 RepID=A0A8M3AW26_DANRE) HSP 1 Score: 80.9 bits (198), Expect = 6.810e-15 Identity = 56/168 (33.33%), Postives = 87/168 (51.79%), Query Frame = 1
Query: 4 LQSGTYVAMDNFFSSPVLFLCLLWHGVFAVGTLMDIHRGVCQAIWYWTTTKQTL*KKGEMSFARFGFLTFTQWKDSKLVRFLSTIHVTM-GDFVPLPGGRKET-------LLQPSCRLNYNTYMGGVDLADQLNGYYQSLHRSKYFFWRRMFEQKFMQASSNAWLLYR 483
L G ++ +DNF++SP LF L G A GT D + V + T++ +G + + R L F +W D++ V STIH GD V KET + P C ++YN YMGGVDL+DQL YY S+H+ ++R + A++N+++L++
Sbjct: 160 LGRGYHLYVDNFYTSPKLFRDLYASGFVACGTFKDSRKNVRETKQNALTSRSP---RGSIRWIRQNKLLFVKWMDTREVSVCSTIHKAFDGDTVTRNVHDKETGSWQIKNIASPRCVVDYNKYMGGVDLSDQLLQYY-SVHKRSNRWYRTLLYHFIDIAATNSYILHK 323
BLAST of mRNA_H-elongata_contig153355.3523.1 vs. uniprot
Match: A0A8B8BXT0_CRAVI (piggyBac transposable element-derived protein 4-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8BXT0_CRAVI) HSP 1 Score: 80.9 bits (198), Expect = 9.210e-15 Identity = 59/157 (37.58%), Postives = 81/157 (51.59%), Query Frame = 1
Query: 10 SGTYVAMDNFFSSPVLFLCLLWHGVFAVGTLMDIHRGVCQAIWYWTTTKQTL*KKGEMSFARFGFLTFTQWKDSKLVRFLSTIHVTMGDFVPLPGGRKETLLQ-PSCRLNYNTYMGGVDLADQLNGYYQSLHRSKYFFWRRMFEQKFMQASSNAWLL 477
S V MDNF++SP L + L GV A GT+ RG+ + + K L K E A+ LTFT WKD+K V LS H + T++Q P +Y +M GVDL DQ+ GYY HRSK + WRR+F M ++ NA+++
Sbjct: 304 SNIRVYMDNFYTSPDLLMDLHVRGVMACGTVRANRRGLPKDL---LPNKINL-NKHEFKIAQKDNLTFTVWKDTKPVCVLSNFHDPNHRGQVTRRAAENTVVQVPRLLSDYQKHMKGVDLCDQMIGYYMLNHRSKKW-WRRIFFYLMMASAHNAYIV 455 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig153355.3523.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig153355.3523.1 >prot_H-elongata_contig153355.3523.1 ID=prot_H-elongata_contig153355.3523.1|Name=mRNA_H-elongata_contig153355.3523.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=103bp MSFARFGFLTFTQWKDSKLVRFLSTIHVTMGDFVPLPGGRKETLLQPSCRback to top mRNA from alignment at H-elongata_contig153355:650..1453+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig153355.3523.1 ID=mRNA_H-elongata_contig153355.3523.1|Name=mRNA_H-elongata_contig153355.3523.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=804bp|location=Sequence derived from alignment at H-elongata_contig153355:650..1453+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig153355:650..1453+ >mRNA_H-elongata_contig153355.3523.1 ID=mRNA_H-elongata_contig153355.3523.1|Name=mRNA_H-elongata_contig153355.3523.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=618bp|location=Sequence derived from alignment at H-elongata_contig153355:650..1453+ (Himanthalia elongata Himel1 dioecious)back to top |