prot_H-elongata_contig153266.3515.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig153266.3515.1
Unique Nameprot_H-elongata_contig153266.3515.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length263
Homology
BLAST of mRNA_H-elongata_contig153266.3515.1 vs. uniprot
Match: D8LL82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL82_ECTSI)

HSP 1 Score: 318 bits (815), Expect = 5.500e-104
Identity = 165/260 (63.46%), Postives = 196/260 (75.38%), Query Frame = 0
Query:    1 MWRALTITRPTIIVR---HLLVHKRSLQVYTCGEGFLGCLGHGDFAPREYALPVEALAHKDVRCISAGWTHSAAVCAD-GELLVWGRPFDMKQPLRIWNIQRFLPFVVSVINSVASKRELLSRPVAMPIGSPQHQPITSLSPTAGGKGPTPSAACDVPSPPVKAVSVACSAALTVVLGDDGRVYCMGYNRWGQCGQGSQNVFTIFEPLRVGGQELDNERVTSVAVGFQQVLVLCESGRVYGWGKSLRGQLGIGADMVELP 256
            M RAL  TR ++  R   H    KR+L VYT GEGFLG LGHGDF+ RE ALPV ALA +D+RC+SAGWTHSAAVC D GE+LVWGRPFD+KQPLRI  IQR  PFVV+ IN++AS RE+L  PV++P+ +      T+ + TA      PS         ++A SVACSAALTVVLG+DG+VYCMGYNRWGQCGQG  NVFT+FEPLRVGG+ L+ E V  +AVGFQQVLVLCESGRV+GWGK LRGQLG+G +M+ELP
Sbjct:    1 MRRALQATRSSLPSRPRHHHQSRKRALHVYTHGEGFLGALGHGDFSAREQALPVAALASRDLRCVSAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALASSREVLPSPVSVPLMAEPAAASTASTVTAALHDARPSLHFPPTPSSLRAKSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPDNVFTVFEPLRVGGRALEREAVVKLAVGFQQVLVLCESGRVFGWGKGLRGQLGVGGEMMELP 260          
BLAST of mRNA_H-elongata_contig153266.3515.1 vs. uniprot
Match: A0A6H5JG88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG88_9PHAE)

HSP 1 Score: 308 bits (790), Expect = 3.170e-100
Identity = 163/261 (62.45%), Postives = 197/261 (75.48%), Query Frame = 0
Query:    1 MWRALTITRPTIIVR---HLLVHKRSLQVYTCGEGFLGCLGHGDFAPREYALPVEALAHKDVRCISAGWTHSAAVCAD-GELLVWGRPFDMKQPLRIWNIQRFLPFVVSVINSVASKRELLSRPVAMPIGSPQHQPITSLSPTAGGKGPTPSAACDVPSPP-VKAVSVACSAALTVVLGDDGRVYCMGYNRWGQCGQGSQNVFTIFEPLRVGGQELDNERVTSVAVGFQQVLVLCESGRVYGWGKSLRGQLGIGADMVELP 256
            M RAL  TR ++  R   H    KR+L VYT GEGFLG LGHGDF+ RE  LPV ALA +D+RC SAGWTHSAAVC D GE+LVWGRPFD+KQPLRI  IQR  PFVV+ IN++AS RE+L  PV +P+ +      T+ + TA      PS+   +P+P  ++A SVACSAALTVVLG+DG+VYCMGYNRWGQCGQG +N FT+FEPLRVGG+ L+ E+V  +AVG QQVLVLCESGRV+GWGK LRGQLG+G + +ELP
Sbjct:   17 MRRALQATRSSLPSRPRHHHQSRKRALHVYTHGEGFLGALGHGDFSAREETLPVAALASRDLRCASAGWTHSAAVCRDTGEVLVWGRPFDLKQPLRINRIQRLFPFVVTAINALASSREVLPSPVPVPLIAKPSAASTASTITAAFHDARPSS-YSLPAPSSLRANSVACSAALTVVLGEDGKVYCMGYNRWGQCGQGPENEFTVFEPLRVGGRALEREQVVKLAVGLQQVLVLCESGRVFGWGKGLRGQLGVGDETMELP 276          
BLAST of mRNA_H-elongata_contig153266.3515.1 vs. uniprot
Match: A0A196SGG2_BLAHN (Ankyrin repeat-containing protein n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SGG2_BLAHN)

HSP 1 Score: 132 bits (332), Expect = 1.970e-32
Identity = 88/251 (35.06%), Postives = 125/251 (49.80%), Query Frame = 0
Query:   10 PTIIVRHLL-VHKRSLQVYTCGEGFLGCLGHGDFAPREYALPVEALAHKDVRCISAGWTHSAAVCADGELLVWGRPFDMKQPLRIWNIQRFLPFVVSVINSVASKRELLSRPVAMPIGSPQHQPITSLSPTAGGKGPTPSAACDVPSPPVKAVSVACSAALTVVLGDDGRVYCMGYNRWGQCGQGSQNVFTIFEPLRVGGQELDNERV-TSVAVGFQQVLVLCESGRVYGWGKSLRGQLGIG-ADMVELPV 257
            P + VR L  V   SL VYT G+G +G LGH D+  REY   V++L  + +  I+ GW H+  V  DGE++++GR  D++  +   N+  +LP V+   N+      + +R               S+ P   GK                 V VA S AL+  L D   +Y  GYNR+GQCG   ++V  ++ P +V    LD + +   +A GFQ    LCESGRVY WGK+  GQLG G  DM   P+
Sbjct:   18 PPLSVRLLRSVSTESLSVYTYGKGAIGALGHNDYNDREYPCRVDSLEGRGIHKIACGWAHNCLVDGDGEMVIFGRTQDVRNIIGAGNMISYLPKVIRSFNNFFKNTVIETR-------------FPSVLPIEDGK----------------CVDVAASMALSFCLTDTHHIYAYGYNRYGQCGVDMKDV-NLYAPKQV---MLDEDEIPVKLACGFQHACCLCESGRVYAWGKANHGQLGRGDVDMTFKPL 235          
BLAST of mRNA_H-elongata_contig153266.3515.1 vs. uniprot
Match: A0A5D6XTS7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTS7_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.660e-29
Identity = 81/235 (34.47%), Postives = 113/235 (48.09%), Query Frame = 0
Query:   25 QVYTCGEGFLGCLGHGDFAPREYALPVEALAHKDVRCISAGWTHSAAVCADGELLVWGRPFDMKQPLRIWNIQRFLPFVVSVINSVASKR---ELLSRPVAMPIGSPQHQPITSLSPTAGGKGPTPSAACDVPSPPVKAVSVACSAALTVVLGDDGRVYCMGYNRWGQCGQGSQNVFTIFEPLRVGGQELDNERVTSVAVGFQQVLVLCESGRVYGWGKSLRGQLGIGADMVELP 256
            +VY+ GEG+LG LG G +A       +E  A      +SAGW H   V + G+  V+GR    +  +R  NIQR  P++++  N    +R    LL   VA+P G                                +A  + CSAALT+VL + GR++  G N +GQCG   + V    EP+RV    LD + V  VA G+Q  L +  SG V+ WGK  RGQLG G+  V+ P
Sbjct:   28 RVYSYGEGYLGALGTGAYAGVAQPTALEEPAALGATQLSAGWAHGGFVSSAGDTFVFGRALSFRDVIRSTNIQRVAPWLLAWTNEFTRRRGVDTLLPARVALPEGE-------------------------------RARKLVCSAALTLVLAESGRLFAFGANTFGQCGNDREGVSEP-EPVRVA---LDGDDVVDVAAGYQHALAVTRSGAVFAWGKGERGQLGFGSANVKAP 227          
BLAST of mRNA_H-elongata_contig153266.3515.1 vs. uniprot
Match: A0A7S3XQZ6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQZ6_HETAK)

HSP 1 Score: 103 bits (257), Expect = 2.250e-23
Identity = 65/169 (38.46%), Postives = 85/169 (50.30%), Query Frame = 0
Query:   28 TCGEGFLGCLGHGDFAPREYAL-PVEALAHKD-VRCISAGWTHSAAVCADGELLVWGRPFDMKQPLRIWNIQRFLPFVVSVINSVASKRELLSRPVAMPIGSPQHQPITSLSPTAGGKGPTPSAACDVPSPPVKAVSVACSAALTVVLGDDGRVYCMGYNRWGQCGQGS 194
            + GEGFLGCLG G+F  +  +  PV  L   + V  I++GW HSAAV   G   +WGRPFD K  LR+ N+      +  + N+ +S  E+L  P  M +  P              +               +AV VACSA LT V+  DGRV C G NRWGQCG G+
Sbjct:   39 SAGEGFLGCLGTGNFEDQLISFQPVVGLPKDEKVIAIASGWAHSAAVTQAGACYIWGRPFDFKNVLRLNNMHTASRALAQLANAFSSPEEVLLAPRVMAL-PPXXXXXXXXXXXXXXEA-------------TRAVGVACSAGLTAVVTSDGRVLCFGQNRWGQCGTGA 193          
BLAST of mRNA_H-elongata_contig153266.3515.1 vs. uniprot
Match: A0A482S5U3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S5U3_9ARCH)

HSP 1 Score: 103 bits (257), Expect = 3.770e-23
Identity = 82/225 (36.44%), Postives = 107/225 (47.56%), Query Frame = 0
Query:   25 QVYTCGEGFLGCLGHGDFAPREYAL-PVEALAH-KDVRCISAGWTHSAAVCADGELLVWGRPFDMKQPLRIWNIQRFLPFVVSVINSVASKRELLSRPVAMPIGSPQHQPITSLSPTAGGKGPTPSAACDVPSPPVKAVSVACSAALTVVLGDDGRVYCMGYNRWGQCGQGSQNVFTIFEPLRVGGQELDNERVTSVAVGFQQVLVLCESGRVYGWGKSLRGQLG 247
            +VY  G G  G LG GD    E    P+  L +  +V+ +SAGW HSAAV   GE+ VWG+ FD    LR+  I        ++ NS A  R +     +M  G  +H           G  P P+    +P   V+ V   CSA LTV+L   G VY MG N+W QCG+       ++EP  V G  L  +    V  G Q V+ L   G  Y WGKS +GQLG
Sbjct:   24 KVYVRGSGLYGALGLGDALTDETIFTPLGFLNNINNVKHVSAGWGHSAAVTTQGEVYVWGKCFDFSSLLRLNRIS-------AMSNSFA--RIVARSSNSMLFGGGEH-----------GYFPVPTR---LPLDDVQTVQ--CSAGLTVMLTKQGEVYVMGSNQWNQCGKPIDKQIHVYEPSLVPGIPLCKK----VEAGLQHVVALGRDGSCYAWGKSNKGQLG 219          
BLAST of mRNA_H-elongata_contig153266.3515.1 vs. uniprot
Match: A0A484E934_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E934_BRELC)

HSP 1 Score: 106 bits (264), Expect = 7.820e-23
Identity = 68/227 (29.96%), Postives = 107/227 (47.14%), Query Frame = 0
Query:   30 GEGFLGCLGHGDFAPREYALPVEALAHKDVRCISAGWTHSAAVCADGELLVWGRPFDMKQPLRIWNIQRFLPFVVSVINSVASKRELLSRPVAMPIGSPQHQPITSLSPTAGGKGPTPSAACDVPSPPVKAVSVACSAALTVVLGDDGRVYCMGYNRWGQCGQGSQNVFTIFEPLRVGGQELDNERVTSVAVGFQQVLVLCESGRVYGWGKSLRGQLGIGADMVELP 256
            G+GFLG LG G +       P+       V+ IS GW H+  V   G+  ++GR    +  +R  N+QR LP +V  +NS    R + +   A+ +  P  + +  +                            CSAALT +L + G+++ +G N +GQCG G + V ++  P  V     D ++V  +A G+Q  L + E+G V+ WGK  RGQLG G+   + P
Sbjct:   38 GDGFLGALGTGGYDDVVAPTPLATTTALSVKEISVGWAHAGFVTDQGDAYIYGRTHSFRDVIRSTNMQRVLPKLVWWMNSFTRSRGVDTLEPAL-LEMPDRERVKKI---------------------------VCSAALTFILTECGKLFTLGANGYGQCGIGEEGV-SVQLPTHV---RFDGDKVVDIASGYQHGLAVTENGTVFCWGKGERGQLGFGSGNTDAP 232          
BLAST of mRNA_H-elongata_contig153266.3515.1 vs. uniprot
Match: B7G4H9_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G4H9_PHATC)

HSP 1 Score: 92.8 bits (229), Expect = 8.100e-18
Identity = 91/272 (33.46%), Postives = 124/272 (45.59%), Query Frame = 0
Query:   19 VHKRSLQVYTCGEGFLGCLGHGDFAPR--------EYALPVEALAHKDVRCISAGWTHSAAVCADGELLVWGRPFDMKQPLRIWNIQRFLPFVV---SVINSVASKRELLSR---PVAMPIGS-------PQHQPITSLSPTAGGKGPTPSAACDVPSPPVKAVSVACSAALTVVLGDDGRVYCMGYNRWGQCGQG--SQNVFTIFEPLRVGGQELDNER---------VTSVAVGFQQVLVLCESGRVYGWGKSLRGQLGIGADMVELPVA 258
            + +R+  VY  G G+ G  G+G F           E   P++ +    V+ IS GW H+A +  D  LL+ GRP D    LR+    R LP  V   ++ +S+   R L SR   P+A+ IG            P T L            A   +P   V + SV+CSAALT ++ + G+VY  G N +GQCG G  S +V+    PLR    E  N+          V  VA+G Q  + L E G V+ WGK  RGQLG G    E   A
Sbjct:   26 IARRTFAVYAVGSGWTGAFGNGRFDQEISGHNDEEEAGSPLK-IYDGSVKDISLGWGHTAILTEDRRLLLAGRPHDFSVLLRL----RRLPLWVRNYAINSSINEFRGLDSRSVHPIAL-IGRLITWLAIRFKYPTTELEAARRHSIFPELAEIALPDSEVPS-SVSCSAALTAIVTESGKVYAFGLNGFGQCGIGMTSNHVWNPSSPLRGLTSEFANQPRGEMEQSYPVVDVALGLQHGICLNEVGEVFCWGKGERGQLGQGLITTEAHTA 290          
BLAST of mRNA_H-elongata_contig153266.3515.1 vs. uniprot
Match: UPI00158C8EE1 (X-linked retinitis pigmentosa GTPase regulator n=1 Tax=Chelonus insularis TaxID=460826 RepID=UPI00158C8EE1)

HSP 1 Score: 77.4 bits (189), Expect = 1.920e-12
Identity = 71/250 (28.40%), Postives = 112/250 (44.80%), Query Frame = 0
Query:   16 HLLVHKRSLQVYTCGEGFLGCLGHGDFAPREYA---LPVE--ALAHKDVRCISAGWTHSAAVCADGELLVWGRPFDMKQPLRIWNIQRFLPFVVSVINSVASKRELLSRPVAMPIGSPQHQPITSLSPT--------AGGKGPTPSAACDVPSPPVK----AVSVACSAALTVVLGDDGRVYCMGYNRWGQCGQGSQNVFTIFEPLRVGGQELDNERVTSVAVGFQQVLVLCESGRVYGWGKSLRGQLGI 248
            H L+     +++ CG      LG G  +  E +   +P+    +A   +  ++AG  HS A+ +DGE+L WG   +          Q  LP    ++N + +K +L   PV        H    + S          +G  G T      V   P++    AV VAC    T++LGDDG +YC G N  GQ G G+ NV  I  P ++    L+NE +  +  G   + V+ ESG+++  G    G+LG+
Sbjct:   99 HTLICTGEQKIFACGSDQESQLGRGQMSLGECSSSPVPIYDCGIAGPKILQVAAGSHHSLALTSDGEVLAWGSNLEG---------QLGLPGTSGLVN-IPTKVQL-PEPVKQISAGYYHSAFLTESGAVYVCGEAESGKLGITLDFRTQVAPKPMQLSTTAVFVACGGHHTLILGDDGNLYCTGSNASGQLGMGT-NVTEIQTPKQLSRGVLENEVIAKIECGESHIAVVTESGKLFTCGDGRHGKLGL 336          
BLAST of mRNA_H-elongata_contig153266.3515.1 vs. uniprot
Match: UPI001C9B10D5 (X-linked retinitis pigmentosa GTPase regulator-like n=1 Tax=Colletes gigas TaxID=935657 RepID=UPI001C9B10D5)

HSP 1 Score: 77.0 bits (188), Expect = 2.600e-12
Identity = 69/250 (27.60%), Postives = 107/250 (42.80%), Query Frame = 0
Query:   16 HLLVHKRSLQVYTCGEGFLGCLGHGDFAPREYAL-PV----EALAHKDVRCISAGWTHSAAVCADGELLVWGRPFDMKQPLRIWNIQRFLPFVVSVINSVASKRELLSRPVAMPIGSPQHQPITSLSPTAGGKGPTPSAACDVPSP------------PVKAVSVACSAALTVVLGDDGRVYCMGYNRWGQCGQGSQNVFTIFEPLRVGGQELDNERVTSVAVGFQQVLVLCESGRVYGWGKSLRGQLGI 248
            H L+   + +++TCG    G LG G  A  +YA  PV      LA   +  ++AG  HS A+  DG +L WG   +          Q  LP +  ++N        ++ PV        H    + S      G + S    + +             P  A+ VAC    T++L ++G +YC G N  GQ G G  NV  +F P  +    L NE +T +A G     ++ ESG+++  G    G+LG+
Sbjct:   99 HTLICTGAQKLFTCGSDQEGQLGRGTSAIGDYASSPVLVYDSGLAGAKIVQVAAGSYHSLALTDDGVVLAWGSNLEG---------QLGLPDISGLVNKPTKVH--ITEPVKQISAGYYHSAFLTESGLVYVCGESESGKLGIDAKFSSQAAPKQMQLPCPAMHVACGGHHTLILAENGNLYCTGNNSSGQLGLGI-NVTELFTPKLLPRGALQNETITRIACGESHTAIVTESGKLFTCGDGRHGKLGL 336          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig153266.3515.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL82_ECTSI5.500e-10463.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JG88_9PHAE3.170e-10062.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A196SGG2_BLAHN1.970e-3235.06Ankyrin repeat-containing protein n=1 Tax=Blastocy... [more]
A0A5D6XTS7_9STRA1.660e-2934.47Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7S3XQZ6_HETAK2.250e-2338.46Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A482S5U3_9ARCH3.770e-2336.44Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A484E934_BRELC7.820e-2329.96Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
B7G4H9_PHATC8.100e-1833.46Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
UPI00158C8EE11.920e-1228.40X-linked retinitis pigmentosa GTPase regulator n=1... [more]
UPI001C9B10D52.600e-1227.60X-linked retinitis pigmentosa GTPase regulator-lik... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PRINTSPR00633RCCNDNSATIONcoord: 25..41
score: 44.12
coord: 163..179
score: 30.39
coord: 59..72
score: 29.76
coord: 179..193
score: 32.22
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 25..72
e-value: 2.3E-5
score: 24.9
coord: 176..226
e-value: 1.1E-7
score: 32.4
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 24..75
score: 9.278
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 177..232
score: 10.343
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 129..259
e-value: 1.5E-23
score: 85.2
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 3..87
e-value: 1.5E-15
score: 58.9
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 16..249
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 21..250

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig153266contigH-elongata_contig153266:317..1225 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig153266.3515.1mRNA_H-elongata_contig153266.3515.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig153266 317..1225 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig153266.3515.1 ID=prot_H-elongata_contig153266.3515.1|Name=mRNA_H-elongata_contig153266.3515.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=263bp
MWRALTITRPTIIVRHLLVHKRSLQVYTCGEGFLGCLGHGDFAPREYALP
VEALAHKDVRCISAGWTHSAAVCADGELLVWGRPFDMKQPLRIWNIQRFL
PFVVSVINSVASKRELLSRPVAMPIGSPQHQPITSLSPTAGGKGPTPSAA
CDVPSPPVKAVSVACSAALTVVLGDDGRVYCMGYNRWGQCGQGSQNVFTI
FEPLRVGGQELDNERVTSVAVGFQQVLVLCESGRVYGWGKSLRGQLGIGA
DMVELPVAGKCM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens
IPR009091RCC1/BLIP-II