mRNA_H-elongata_contig15325.3514.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig15325.3514.1
Unique NamemRNA_H-elongata_contig15325.3514.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig15325.3514.1 vs. uniprot
Match: A0A6H5JXK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK7_9PHAE)

HSP 1 Score: 414 bits (1063), Expect = 8.190e-129
Identity = 208/289 (71.97%), Postives = 237/289 (82.01%), Query Frame = 1
Query:    1 LLEELSNVFDVSVTKVDKSGGNSSADRYLNATLWTVVFNDPVGDLPGFEAKTSNLTGNFPRVDVVELVKGTSPLEGTVTLSYRDSFTQDIAFDASNQKIKLALEALDTVSTVSVYKHNIATGFEW-VTFRGELGDLELIAAFPYSWEVQSIITGGGDPTPLGGSFFVEFGGYASEDLPHDASADGFKAALEALPGTGRVQVDKTVLENGNNEWLVTFRYIVGDVALIVVDGTGLTGTSASIETIEVSAGSNISLTGESPSLTVEEMQAGRPSYTGSYKPVSTGAYQVSI 864
            LLEELSNV+DVSV+ VDKSGGNSS D Y+NATLWTVVFNDPVGD+P      S+L GN PRVD+VE+VKG SPL+GTVTL+YR+ F QD+AFDAS ++IK  LEALDT+STVSV KHNI  GFEW VTF GELGDLEL++A+PYSWEVQS+ T GGDPTPLGGSF VEFGGY S DLP+DASADG KAALEALPG GRV VDKTVLE+G NEWLVTFR +VGD+ LI VDG+GLTGTSA+IET E++AGSN            EEM +GRPSYT SY PV TG YQV++
Sbjct: 2269 LLEELSNVYDVSVSVVDKSGGNSSVDSYMNATLWTVVFNDPVGDVPSLLVNGSSLGGNSPRVDIVEVVKGVSPLDGTVTLAYREGFAQDLAFDASEEEIKATLEALDTISTVSVSKHNIGAGFEWWVTFSGELGDLELLSAYPYSWEVQSLRTYGGDPTPLGGSFSVEFGGYTSGDLPYDASADGLKAALEALPGPGRVDVDKTVLESGRNEWLVTFRDLVGDIELIAVDGSGLTGTSATIETTEIAAGSNXXXXXXXXXXXXEEMHSGRPSYTASYHPVGTGPYQVAV 2557          
BLAST of mRNA_H-elongata_contig15325.3514.1 vs. uniprot
Match: D7FNA6_ECTSI (Similar to titin isoform N2-B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNA6_ECTSI)

HSP 1 Score: 393 bits (1010), Expect = 1.100e-121
Identity = 201/289 (69.55%), Postives = 230/289 (79.58%), Query Frame = 1
Query:    1 LLEELSNVFDVSVTKVDKSGGNSSADRYLNATLWTVVFNDPVGDLPGFEAKTSNLTGNFPRVDVVELVKGTSPLEGTVTLSYRDSFTQDIAFDASNQKIKLALEALDTVSTVSVYKHNIATGFEW-VTFRGELGDLELIAAFPYSWEVQSIITGGGDPTPLGGSFFVEFGGYASEDLPHDASADGFKAALEALPGTGRVQVDKTVLENGNNEWLVTFRYIVGDVALIVVDGTGLTGTSASIETIEVSAGSNISLTGESPSLTVEEMQAGRPSYTGSYKPVSTGAYQVSI 864
            LLEELS+V+DVSV+ VDKS GNSS D Y+NATLWTVVFNDPVGD+P      S+L GN PRVD+VE+VKG SPLEGTVTL+YR+ F+QD+AFDAS ++IK  LEALDT+STVSV K++I  GFEW VTF GELGDLELI+AFPYSWEVQS+ T GGDPTPLGGSF VEFGGY S DLP+DASADG KAALEALPG GRV VDK VLENG NEWLVTFR +VGDV L+ VDG+ LTGTSA+I T EV+AG                  +GRPSYT SY+PV TG YQV++
Sbjct: 2412 LLEELSSVYDVSVSVVDKSSGNSSVDSYINATLWTVVFNDPVGDVPSLLVNGSSLDGNSPRVDIVEVVKGVSPLEGTVTLAYREGFSQDLAFDASEEEIKATLEALDTISTVSVSKYDIGAGFEWWVTFSGELGDLELISAFPYSWEVQSLRTYGGDPTPLGGSFSVEFGGYTSGDLPYDASADGLKAALEALPGPGRVDVDKIVLENGRNEWLVTFRDLVGDVELVAVDGSDLTGTSATITTTEVAAGXXXXXXXXXXXXXXXXXHSGRPSYTASYQPVGTGPYQVAV 2700          
BLAST of mRNA_H-elongata_contig15325.3514.1 vs. uniprot
Match: A0A418B520_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B520_9STRA)

HSP 1 Score: 206 bits (523), Expect = 2.310e-56
Identity = 120/290 (41.38%), Postives = 172/290 (59.31%), Query Frame = 1
Query:    4 LEELSNVFDVSVTKVDKSGGNSSADRYLNATLWTVVFNDPVGDLPGFEAKTSNLTGNFPRVDVVELVKGTSPLEGTVTLSYRDSFTQDIAFDASNQKIKLALEALDTVSTVSVYKHNIATGFEW-VTFRGELGDLELIAAFPYSWEVQSIITGGGDPTPLGGSFFVEFGGYASEDLPHDASADGFKAALEALPGTGRVQVDKTVL--ENGNNEWLVTFRYIVGDVALIVVDGTGLTGTSASIETIEVSAGSNISLTGESPSLTVEEMQAGRPSYTGSYKPVSTGAYQVSI 864
            L+ L N+  V+VT    + G S+       T W + F   VGD+P  +     LTG    V V E+VKG SPL G+  L++ D  T ++ +D S  ++K  LE L ++S V V + NI  GF+W ++F   +G+L L+ AFP+ ++VQS+ TGGG+PTPL G+F + F G  S  + +DASA   KAALEAL   GRV V ++ L    G  +WLVTFR  +G  AL+V     L G+S+S+   EV +G   +LTG +P LTVE+   G PSYTG+Y P   G+Y +++
Sbjct: 2103 LQSLPNLGTVTVTSQSVNYGGSTG-----LTTWFITFTTLVGDVPSLQLTAKTLTGTSANVFVNEVVKGQSPLAGSFVLNFIDQTTLNLPYDVSALQLKTELEKLPSISQVDVARANINVGFKWTISFTRNVGNLPLLQAFPHQYQVQSVTTGGGNPTPLYGTFTLSFLGQESAPISYDASAKDVKAALEALTSVGRVDVTRSNLLSPGGQFQWLVTFRTELGPNALLVASSQKLLGSSSSVTVAEVQSGLLKALTGNNPVLTVEKKLRGTPSYTGNYVPALPGSYALAV 2387          
BLAST of mRNA_H-elongata_contig15325.3514.1 vs. uniprot
Match: A0A024UP14_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UP14_9STRA)

HSP 1 Score: 206 bits (523), Expect = 2.310e-56
Identity = 120/290 (41.38%), Postives = 172/290 (59.31%), Query Frame = 1
Query:    4 LEELSNVFDVSVTKVDKSGGNSSADRYLNATLWTVVFNDPVGDLPGFEAKTSNLTGNFPRVDVVELVKGTSPLEGTVTLSYRDSFTQDIAFDASNQKIKLALEALDTVSTVSVYKHNIATGFEW-VTFRGELGDLELIAAFPYSWEVQSIITGGGDPTPLGGSFFVEFGGYASEDLPHDASADGFKAALEALPGTGRVQVDKTVL--ENGNNEWLVTFRYIVGDVALIVVDGTGLTGTSASIETIEVSAGSNISLTGESPSLTVEEMQAGRPSYTGSYKPVSTGAYQVSI 864
            L+ L N+  V+VT    + G S+       T W + F   VGD+P  +     LTG    V V E+VKG SPL G+  L++ D  T ++ +D S  ++K  LE L ++S V V + NI  GF+W ++F   +G+L L+ AFP+ ++VQS+ TGGG+PTPL G+F + F G  S  + +DASA   KAALEAL   GRV V ++ L    G  +WLVTFR  +G  AL+V     L G+S+S+   EV +G   +LTG +P LTVE+   G PSYTG+Y P   G+Y +++
Sbjct: 2332 LQSLPNLGTVTVTSQSVNYGGSTG-----LTTWFITFTTLVGDVPSLQLTAKTLTGTSANVFVNEVVKGQSPLAGSFVLNFIDQTTLNLPYDVSALQLKTELEKLPSISQVDVARANINVGFKWTISFTRNVGNLPLLQAFPHQYQVQSVTTGGGNPTPLYGTFTLSFLGQESAPISYDASAKDVKAALEALTSVGRVDVTRSNLLSPGGQFQWLVTFRTELGPNALLVASSQKLLGSSSSVTVAEVQSGLLKALTGNNPVLTVEKKLRGTPSYTGNYVPALPGSYALAV 2616          
BLAST of mRNA_H-elongata_contig15325.3514.1 vs. uniprot
Match: A0A6G0XJZ2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJZ2_9STRA)

HSP 1 Score: 201 bits (511), Expect = 9.300e-55
Identity = 117/290 (40.34%), Postives = 169/290 (58.28%), Query Frame = 1
Query:    4 LEELSNVFDVSVTKVDKSGGNSSADRYLNATLWTVVFNDPVGDLPGFEAKTSNLTGNFPRVDVVELVKGTSPLEGTVTLSYRDSFTQDIAFDASNQKIKLALEALDTVSTVSVYKHNIATGFEW-VTFRGELGDLELIAAFPYSWEVQSIITGGGDPTPLGGSFFVEFGGYASEDLPHDASADGFKAALEALPGTGRVQVDKTVL--ENGNNEWLVTFRYIVGDVALIVVDGTGLTGTSASIETIEVSAGSNISLTGESPSLTVEEMQAGRPSYTGSYKPVSTGAYQVSI 864
            L+ L N+  V+VT  +   G SS       T W + F   VG++P  +  T  LTG+   V V E+VKG SPL G+  L+Y    T  + +D S  ++K  LE L  +S V V + NI  GF+W ++F   LG+L L+ A+P  ++VQSI TGGG PTPL G+F + F G  +  + +DA+    K+ALEALP  G V V ++ +    G  +WLVTFR  +G   L+V D T L G+  ++  +EV +G   SLTG SP+L VE+ ++G PSYTG+Y P   G Y +++
Sbjct: 2317 LQSLPNLGTVTVTTQNVDAGGSSG-----LTTWFITFTTLVGNVPSLQIATKTLTGSSANVYVNEVVKGQSPLAGSFVLNYVGQTTLSLPYDISAAQLKTELEKLPAISQVDVARTNINAGFKWTISFTKNLGNLPLLQAYPVQYQVQSITTGGGSPTPLYGTFTLSFNGAVTIPISYDAAGVDVKSALEALPTIGSVDVTRSNMLSAGGQFQWLVTFRTELGQNPLLVPDYTKLKGSLGTVIVVEVQSGLRPSLTGNSPTLFVEKKESGTPSYTGNYVPSQPGTYSLAV 2601          
BLAST of mRNA_H-elongata_contig15325.3514.1 vs. uniprot
Match: A0A397DNH3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DNH3_9STRA)

HSP 1 Score: 197 bits (501), Expect = 1.920e-53
Identity = 114/290 (39.31%), Postives = 169/290 (58.28%), Query Frame = 1
Query:    4 LEELSNVFDVSVTKVDKSGGNSSADRYLNATLWTVVFNDPVGDLPGFEAKTSNLTGNFPRVDVVELVKGTSPLEGTVTLSYRDSFTQDIAFDASNQKIKLALEALDTVSTVSVYKHNIATGFEW-VTFRGELGDLELIAAFPYSWEVQSIITGGGDPTPLGGSFFVEFGGYASEDLPHDASADGFKAALEALPGTGRVQVDKTVL--ENGNNEWLVTFRYIVGDVALIVVDGTGLTGTSASIETIEVSAGSNISLTGESPSLTVEEMQAGRPSYTGSYKPVSTGAYQVSI 864
            L+ L+N+  V+VT    + G S+       T W + F   VGD+P  +  T +LTG    V V E++KG SPL GT  LS+ D  T ++ +D S  ++K  LE +  +S V V + N+  GF+W ++F   +G+L L+ A PY ++VQS+ T GG PTPL G+F + F G  S  + +DA+A   KAALE+L   GRV V ++ L    G  +WLVTFR  +G  AL+V +   L+G+   +   EV +G   +LTG +P LTVE+   G PSYT +Y P   G+Y +++
Sbjct: 2261 LQSLANLGTVTVTSQSANYGASTG-----LTTWFITFTTLVGDVPSLQITTKSLTGTSANVYVNEVIKGQSPLAGTFVLSFVDQTTLNLPYDISALQLKAELEKMPLISQVDVARTNLNVGFKWTISFTKNVGNLPLLQASPYQYQVQSVTTSGGSPTPLYGTFTLSFNGQESAPISYDANAKDVKAALESLTSIGRVDVTRSNLLSSGGQFQWLVTFRTELGPNALLVANFQRLSGSFPGVSVAEVQSGLLKALTGNNPVLTVEKKLRGTPSYTANYVPALPGSYSLAV 2545          
BLAST of mRNA_H-elongata_contig15325.3514.1 vs. uniprot
Match: A0A397F0T5_9STRA (Uncharacterized protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F0T5_9STRA)

HSP 1 Score: 197 bits (501), Expect = 1.960e-53
Identity = 114/290 (39.31%), Postives = 169/290 (58.28%), Query Frame = 1
Query:    4 LEELSNVFDVSVTKVDKSGGNSSADRYLNATLWTVVFNDPVGDLPGFEAKTSNLTGNFPRVDVVELVKGTSPLEGTVTLSYRDSFTQDIAFDASNQKIKLALEALDTVSTVSVYKHNIATGFEW-VTFRGELGDLELIAAFPYSWEVQSIITGGGDPTPLGGSFFVEFGGYASEDLPHDASADGFKAALEALPGTGRVQVDKTVL--ENGNNEWLVTFRYIVGDVALIVVDGTGLTGTSASIETIEVSAGSNISLTGESPSLTVEEMQAGRPSYTGSYKPVSTGAYQVSI 864
            L+ L+N+  V+VT    + G S+       T W + F   VGD+P  +  T +LTG    V V E++KG SPL GT  LS+ D  T ++ +D S  ++K  LE +  +S V V + N+  GF+W ++F   +G+L L+ A PY ++VQS+ T GG PTPL G+F + F G  S  + +DA+A   KAALE+L   GRV V ++ L    G  +WLVTFR  +G  AL+V +   L+G+   +   EV +G   +LTG +P LTVE+   G PSYT +Y P   G+Y +++
Sbjct: 2261 LQSLTNLGTVTVTSQSANYGASTG-----LTTWFITFTTLVGDVPSLQITTKSLTGTSANVYVNEVIKGQSPLAGTFVLSFVDQTTLNLPYDISALQLKAELEKMPLISQVDVARTNLNVGFKWTISFTKNVGNLPLLQASPYQYQVQSVTTSGGSPTPLYGTFTLSFNGQESAPISYDANAKDVKAALESLTSIGRVDVTRSNLLSSGGQFQWLVTFRTELGPNALLVANFQRLSGSFPGVSVAEVQSGLLKALTGNNPVLTVEKKLRGTPSYTANYVPALPGSYSLAV 2545          
BLAST of mRNA_H-elongata_contig15325.3514.1 vs. uniprot
Match: A0A397AXV7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AXV7_9STRA)

HSP 1 Score: 197 bits (501), Expect = 1.990e-53
Identity = 114/290 (39.31%), Postives = 169/290 (58.28%), Query Frame = 1
Query:    4 LEELSNVFDVSVTKVDKSGGNSSADRYLNATLWTVVFNDPVGDLPGFEAKTSNLTGNFPRVDVVELVKGTSPLEGTVTLSYRDSFTQDIAFDASNQKIKLALEALDTVSTVSVYKHNIATGFEW-VTFRGELGDLELIAAFPYSWEVQSIITGGGDPTPLGGSFFVEFGGYASEDLPHDASADGFKAALEALPGTGRVQVDKTVL--ENGNNEWLVTFRYIVGDVALIVVDGTGLTGTSASIETIEVSAGSNISLTGESPSLTVEEMQAGRPSYTGSYKPVSTGAYQVSI 864
            L+ L+N+  V+VT    + G S+       T W + F   VGD+P  +  T +LTG    V V E++KG SPL GT  LS+ D  T ++ +D S  ++K  LE +  +S V V + N+  GF+W ++F   +G+L L+ A PY ++VQS+ T GG PTPL G+F + F G  S  + +DA+A   KAALE+L   GRV V ++ L    G  +WLVTFR  +G  AL+V +   L+G+   +   EV +G   +LTG +P LTVE+   G PSYT +Y P   G+Y +++
Sbjct: 2261 LQSLTNLGTVTVTSQSANYGASTG-----LTTWFITFTTLVGDVPSLQITTKSLTGTSANVYVNEVIKGQSPLAGTFVLSFVDQTTLNLPYDISALQLKAELEKMPLISQVDVARTNLNVGFKWTISFTKNVGNLPLLQASPYQYQVQSVTTSGGSPTPLYGTFTLSFNGQESAPISYDANAKDVKAALESLTSIGRVDVTRSNLLSSGGQFQWLVTFRTELGPNALLVANFQRLSGSFPGVSVAEVQSGLLKALTGNNPVLTVEKKLRGTPSYTANYVPALPGSYSLAV 2545          
BLAST of mRNA_H-elongata_contig15325.3514.1 vs. uniprot
Match: A0A3L6VDX7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VDX7_9STRA)

HSP 1 Score: 197 bits (501), Expect = 2.010e-53
Identity = 115/290 (39.66%), Postives = 168/290 (57.93%), Query Frame = 1
Query:    4 LEELSNVFDVSVTKVDKSGGNSSADRYLNATLWTVVFNDPVGDLPGFEAKTSNLTGNFPRVDVVELVKGTSPLEGTVTLSYRDSFTQDIAFDASNQKIKLALEALDTVSTVSVYKHNIATGFEW-VTFRGELGDLELIAAFPYSWEVQSIITGGGDPTPLGGSFFVEFGGYASEDLPHDASADGFKAALEALPGTGRVQVDKTVL--ENGNNEWLVTFRYIVGDVALIVVDGTGLTGTSASIETIEVSAGSNISLTGESPSLTVEEMQAGRPSYTGSYKPVSTGAYQVSI 864
            L+ L+N+  V+VT    + G S+       T W + F   VGD+P  +  T  LTG    V V E+VKG SPL GT  LS+ D  T ++ +D S  ++K  LE +  +S V V + N+  GF+W ++F   +G+L L+ A PY ++VQS+ T GG PTPL G+F + F G  S  + +DA+A   KAALE+L   GRV V ++ L    G  +WLVTFR  +G  AL+V +   L+G+   +   EV +G   +LTG +P LTVE+   G PSYT +Y P   G+Y +++
Sbjct: 1804 LQSLTNLGTVTVTSQSANYGASTG-----LTTWFITFTTLVGDVPSLQITTKTLTGTSANVYVNEVVKGQSPLAGTFVLSFVDQTTLNLPYDISALQLKAELEKMPLISQVDVARTNLNVGFKWTISFTKNVGNLPLLQASPYQYQVQSVTTSGGSPTPLYGTFTLSFNGQESAPISYDANAKDVKAALESLTSIGRVDVTRSNLLSSGGQFQWLVTFRTELGPNALLVANFQRLSGSFPGVSVAEVQSGLLKALTGNNPVLTVEKKLRGTPSYTANYVPALPGSYSLAV 2088          
BLAST of mRNA_H-elongata_contig15325.3514.1 vs. uniprot
Match: A0A418C134_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418C134_9STRA)

HSP 1 Score: 197 bits (501), Expect = 2.020e-53
Identity = 114/290 (39.31%), Postives = 169/290 (58.28%), Query Frame = 1
Query:    4 LEELSNVFDVSVTKVDKSGGNSSADRYLNATLWTVVFNDPVGDLPGFEAKTSNLTGNFPRVDVVELVKGTSPLEGTVTLSYRDSFTQDIAFDASNQKIKLALEALDTVSTVSVYKHNIATGFEW-VTFRGELGDLELIAAFPYSWEVQSIITGGGDPTPLGGSFFVEFGGYASEDLPHDASADGFKAALEALPGTGRVQVDKTVL--ENGNNEWLVTFRYIVGDVALIVVDGTGLTGTSASIETIEVSAGSNISLTGESPSLTVEEMQAGRPSYTGSYKPVSTGAYQVSI 864
            L+ L+N+  V+VT    + G S+       T W + F   VGD+P  +  T +LTG    V V E++KG SPL GT  LS+ D  T ++ +D S  ++K  LE +  +S V V + N+  GF+W ++F   +G+L L+ A PY ++VQS+ T GG PTPL G+F + F G  S  + +DA+A   KAALE+L   GRV V ++ L    G  +WLVTFR  +G  AL+V +   L+G+   +   EV +G   +LTG +P LTVE+   G PSYT +Y P   G+Y +++
Sbjct: 2261 LQSLANLGTVTVTSQSANYGASTG-----LTTWFITFTTLVGDVPSLQITTKSLTGTSANVYVNEVIKGQSPLAGTFVLSFVDQTTLNLPYDISALQLKAELEKMPLISQVDVARTNLNVGFKWTISFTKNVGNLPLLQASPYQYQVQSVTTSGGSPTPLYGTFTLSFNGQESAPISYDANAKDVKAALESLTSIGRVDVTRSNLLSSGGQFQWLVTFRTELGPNALLVANFQRLSGSFPGVSVAEVQSGLLKALTGNNPVLTVEKKLRGTPSYTANYVPALPGSYSLAV 2545          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15325.3514.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXK7_9PHAE8.190e-12971.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNA6_ECTSI1.100e-12169.55Similar to titin isoform N2-B n=1 Tax=Ectocarpus s... [more]
A0A418B520_9STRA2.310e-5641.38Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A024UP14_9STRA2.310e-5641.38Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A6G0XJZ2_9STRA9.300e-5540.34Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A397DNH3_9STRA1.920e-5339.31Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A397F0T5_9STRA1.960e-5339.31Uncharacterized protein (Fragment) n=3 Tax=Aphanom... [more]
A0A397AXV7_9STRA1.990e-5339.31Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A3L6VDX7_9STRA2.010e-5339.66Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A418C134_9STRA2.020e-5339.31Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15325contigH-elongata_contig15325:1893..3709 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score396.4
Seed ortholog evalue1.2e-107
Seed eggNOG ortholog2880.D7FNA6
KEGG koko:K12567
KEGG Pathwayko05410,ko05414,map05410,map05414
EggNOG free text desc.cytoskeletal protein binding
EggNOG OGsKOG0613@1,KOG0613@2759
EC2.7.11.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko04131,ko04147,ko04812
Hectar predicted targeting categoryother localisation
Exons6
Model size864
Cds size864
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15325.3514.1prot_H-elongata_contig15325.3514.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig15325 1893..3709 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929905.6918826-CDS-H-elongata_contig15325:1892..20241622929905.6918826-CDS-H-elongata_contig15325:1892..2024Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15325 1893..2024 -
1691679202.7985852-CDS-H-elongata_contig15325:1892..20241691679202.7985852-CDS-H-elongata_contig15325:1892..2024Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15325 1893..2024 -
1622929905.704903-CDS-H-elongata_contig15325:2209..22891622929905.704903-CDS-H-elongata_contig15325:2209..2289Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15325 2210..2289 -
1691679202.8122466-CDS-H-elongata_contig15325:2209..22891691679202.8122466-CDS-H-elongata_contig15325:2209..2289Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15325 2210..2289 -
1622929905.7208803-CDS-H-elongata_contig15325:2608..28891622929905.7208803-CDS-H-elongata_contig15325:2608..2889Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15325 2609..2889 -
1691679202.8201756-CDS-H-elongata_contig15325:2608..28891691679202.8201756-CDS-H-elongata_contig15325:2608..2889Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15325 2609..2889 -
1622929905.73754-CDS-H-elongata_contig15325:3038..31151622929905.73754-CDS-H-elongata_contig15325:3038..3115Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15325 3039..3115 -
1691679202.8278487-CDS-H-elongata_contig15325:3038..31151691679202.8278487-CDS-H-elongata_contig15325:3038..3115Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15325 3039..3115 -
1622929905.7573037-CDS-H-elongata_contig15325:3269..34121622929905.7573037-CDS-H-elongata_contig15325:3269..3412Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15325 3270..3412 -
1691679202.8357856-CDS-H-elongata_contig15325:3269..34121691679202.8357856-CDS-H-elongata_contig15325:3269..3412Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15325 3270..3412 -
1622929905.769636-CDS-H-elongata_contig15325:3558..37091622929905.769636-CDS-H-elongata_contig15325:3558..3709Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15325 3559..3709 -
1691679202.84558-CDS-H-elongata_contig15325:3558..37091691679202.84558-CDS-H-elongata_contig15325:3558..3709Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15325 3559..3709 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig15325.3514.1

>prot_H-elongata_contig15325.3514.1 ID=prot_H-elongata_contig15325.3514.1|Name=mRNA_H-elongata_contig15325.3514.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=288bp
LLEELSNVFDVSVTKVDKSGGNSSADRYLNATLWTVVFNDPVGDLPGFEA
KTSNLTGNFPRVDVVELVKGTSPLEGTVTLSYRDSFTQDIAFDASNQKIK
LALEALDTVSTVSVYKHNIATGFEWVTFRGELGDLELIAAFPYSWEVQSI
ITGGGDPTPLGGSFFVEFGGYASEDLPHDASADGFKAALEALPGTGRVQV
DKTVLENGNNEWLVTFRYIVGDVALIVVDGTGLTGTSASIETIEVSAGSN
ISLTGESPSLTVEEMQAGRPSYTGSYKPVSTGAYQVSI
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mRNA from alignment at H-elongata_contig15325:1893..3709-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig15325.3514.1 ID=mRNA_H-elongata_contig15325.3514.1|Name=mRNA_H-elongata_contig15325.3514.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1817bp|location=Sequence derived from alignment at H-elongata_contig15325:1893..3709- (Himanthalia elongata Himel1 dioecious)
CTGCTTGAGGAGCTCAGCAATGTGTTCGACGTATCCGTCACCAAGGTTGA TAAATCGGGCGGTAACTCTTCCGCTGACCGCTACCTCAACGCTACCCTTT GGACTGTTGTCTTTAATGACCCAGTCGGCGATCTACCGGGGTTTGAGGCG AGTTAATTGAGATGGTACATGCATATTACAATATGTCTTAAACGCAGAGC GCGTAAGAAACAGACGGAAATCTTTGCACCATCCCCAATACACGGTTTTT CAGTGGTCGCCAACCTCAAAGCTGTTTACTTCTCCCTTTCCAGGTAGAAA CTTCCAACCTGACAGGCAACTTTCCAAGGGTTGACGTGGTTGAGTTGGTT AAAGGCACGTCTCCATTGGAGGGAACGGTTACGCTTTCCTACCGGGACAG TTTTACCCAAGATATCGCATTTGATGCATCAAACCAAAAAGTGAGCTCCT ATCCGCGTCCAGAGCTTCCCGATCGCCCTGGGACTGTAAGCAGACACCTG GTTCTTTAGAGGGCAAGCGCCAAGGCATCCCCGTCGACCTTAGCGTTTTA CCACAACTTACTTGTGACGATGATGGTCGCCCACTGTCATCCAGATAAAA TTGGCATTGGAAGCGCTGGATACGGTATCCACAGTTTCTGTATACAAGCA CAACATCGCAACGGGCTTCGAGTGGTGAGGTATATGGTCTCCACCTTTAT AGAGAATATGTAAGTGTAGATGATTGTCTTCAGACGGTGTATTTCATTTA AGTCTTTAGTGGAACTCACGCACGTCAAATGCGCCGCTACCGGGGTGGGG GCATGTTCGTACTATCATAGGTGGGTGACGTTTAGAGGAGAACTTGGCGA CCTTGAGCTCATCGCGGCGTTTCCTTACTCCTGGGAAGTTCAGTCCATCA TCACCGGCGGGGGTGACCCTACCCCCCTTGGAGGCTCTTTCTTTGTGGAA TTTGGAGGCTACGCCTCCGAAGATCTACCCCATGACGCATCTGCCGACGG ATTCAAGGCGGCCTTGGAAGCGCTACCGGGGACAGGGCGTGTACAAGTGG ACAAGACTGTTCTAGAGAATGGAAATAATGAATGGCTGGTCACCTTTAGG TGTGTCTCGTTCTCGAAAAGATGTCCACGAAGATGATAACCGCGCTGTTT AACCTTTTCGGATGTCAGCGTGGACGGTGAGGGACCCAACATGAAATATA CGTAAAATCAAGCATGCTGTGCACTAGTGATACAATATACATAGCGCAAG GCTCCTCCTCTAACGTTAGCTCTAAATTTCTCCTGCCTCACTAGCCAAGA TGCAGCCCGAGTTCATGCTTACCCGAAAACACGTACATCAGGACATATAT AGCTGGCGAGATTGACGATAAAGCACCACGGGAATAAGATATGTCTCCTT TGCACGTGCTTGGTACAGAGACATCGTGGGTGACGTGGCGCTCATCGTTG TAGATGGAACTGGCCTAACTGGAACGTCTGCTTCCATTGAAACTATTGAG GTAGGGATTCCCTGCCCAATAAAAATTTCAACGGTGCCTGTCGAACGGAA TCAGCACGTCACAAAACTGAGCTATTCATTCCTACACACCGGTTTGTTAT GAGATCGGCCCGAAAATATCGCTGATCTTGACGCGTATAGATAATTAGCT TGTTGATTCATTTTTTTGTCAATCTCTTGTTGAAGGTCTCGGCTGGATCA AACATCTCGCTTACTGGAGAGAGCCCTTCTCTAACGGTGGAGGAAATGCA AGCGGGTAGGCCAAGTTATACAGGCAGTTACAAGCCTGTCAGTACCGGGG CGTACCAAGTGAGCATC
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Coding sequence (CDS) from alignment at H-elongata_contig15325:1893..3709-

>mRNA_H-elongata_contig15325.3514.1 ID=mRNA_H-elongata_contig15325.3514.1|Name=mRNA_H-elongata_contig15325.3514.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1728bp|location=Sequence derived from alignment at H-elongata_contig15325:1893..3709- (Himanthalia elongata Himel1 dioecious)
CTGCTTGAGGAGCTCAGCAATGTGTTCGACGTATCCGTCACCAAGGTTGA
TAAATCGGGCGGTAACTCTTCCGCTGACCGCTACCTCAACGCTACCCTTT
GGACTGTTGTCTTTAATGACCCAGTCGGCGATCTACCGGGGTTTGAGGCG
ACTGCTTGAGGAGCTCAGCAATGTGTTCGACGTATCCGTCACCAAGGTTG
ATAAATCGGGCGGTAACTCTTCCGCTGACCGCTACCTCAACGCTACCCTT
TGGACTGTTGTCTTTAATGACCCAGTCGGCGATCTACCGGGGTTTGAGGC
GAAAACTTCCAACCTGACAGGCAACTTTCCAAGGGTTGACGTGGTTGAGT
TGGTTAAAGGCACGTCTCCATTGGAGGGAACGGTTACGCTTTCCTACCGG
GACAGTTTTACCCAAGATATCGCATTTGATGCATCAAACCAAAAAAAACT
TCCAACCTGACAGGCAACTTTCCAAGGGTTGACGTGGTTGAGTTGGTTAA
AGGCACGTCTCCATTGGAGGGAACGGTTACGCTTTCCTACCGGGACAGTT
TTACCCAAGATATCGCATTTGATGCATCAAACCAAAAAATAAAATTGGCA
TTGGAAGCGCTGGATACGGTATCCACAGTTTCTGTATACAAGCACAACAT
CGCAACGGGCTTCGAATAAAATTGGCATTGGAAGCGCTGGATACGGTATC
CACAGTTTCTGTATACAAGCACAACATCGCAACGGGCTTCGAGTGGGTGA
CGTTTAGAGGAGAACTTGGCGACCTTGAGCTCATCGCGGCGTTTCCTTAC
TCCTGGGAAGTTCAGTCCATCATCACCGGCGGGGGTGACCCTACCCCCCT
TGGAGGCTCTTTCTTTGTGGAATTTGGAGGCTACGCCTCCGAAGATCTAC
CCCATGACGCATCTGCCGACGGATTCAAGGCGGCCTTGGAAGCGCTACCG
GGGACAGGGCGTGTACAAGTGGACAAGACTGTTCTAGAGAATGGAAATAA
TGAATGGCTGGTCACCTTTAGGTGTGGGTGACGTTTAGAGGAGAACTTGG
CGACCTTGAGCTCATCGCGGCGTTTCCTTACTCCTGGGAAGTTCAGTCCA
TCATCACCGGCGGGGGTGACCCTACCCCCCTTGGAGGCTCTTTCTTTGTG
GAATTTGGAGGCTACGCCTCCGAAGATCTACCCCATGACGCATCTGCCGA
CGGATTCAAGGCGGCCTTGGAAGCGCTACCGGGGACAGGGCGTGTACAAG
TGGACAAGACTGTTCTAGAGAATGGAAATAATGAATGGCTGGTCACCTTT
AGGTACATCGTGGGTGACGTGGCGCTCATCGTTGTAGATGGAACTGGCCT
AACTGGAACGTCTGCTTCCATTGAAACTATTGAGACATCGTGGGTGACGT
GGCGCTCATCGTTGTAGATGGAACTGGCCTAACTGGAACGTCTGCTTCCA
TTGAAACTATTGAGGTCTCGGCTGGATCAAACATCTCGCTTACTGGAGAG
AGCCCTTCTCTAACGGTGGAGGAAATGCAAGCGGGTAGGCCAAGTTATAC
AGGCAGTTACAAGCCTGTCAGTACCGGGGCGTACCAAGTGAGCATCGTCT
CGGCTGGATCAAACATCTCGCTTACTGGAGAGAGCCCTTCTCTAACGGTG
GAGGAAATGCAAGCGGGTAGGCCAAGTTATACAGGCAGTTACAAGCCTGT
CAGTACCGGGGCGTACCAAGTGAGCATC
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