mRNA_H-elongata_contig153199.3512.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig153199.3512.1 vs. uniprot
Match: A0A6H5L488_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L488_9PHAE) HSP 1 Score: 270 bits (690), Expect = 1.710e-87 Identity = 126/167 (75.45%), Postives = 144/167 (86.23%), Query Frame = 1
Query: 1 IPSEDVFSSRVSELGISNDHTIVVYAKQGSFSAPRCWWTFRVFGHEEVYVLDGGFPAWEASGGRIESGEVKPTSTRPSSGLVQASGNAWKLNAKGFQARLNAPMLRTWRQVLSQVEQGNEAVGQIVDARSLARFRAEAPEPRAGLAGGHIPGSVSLPLTNVLEEGDV 501
IPS DVFS++ SELG+S++ TIVVY K+GSFSAPRCWWTFR FGHE V+VL+GGFPAWE++GG +E GEV P STRPSSGLVQ SGNAW L +KGFQ RLNA MLRTWRQVLSQ E+G EA GQ+VDARSLARF+AEAPEPRAG+AGGH+PGS LP T VL +GDV
Sbjct: 144 IPSVDVFSTKASELGLSSNDTIVVYTKKGSFSAPRCWWTFRAFGHERVHVLNGGFPAWESAGGSVERGEVTPVSTRPSSGLVQTSGNAWMLRSKGFQGRLNAAMLRTWRQVLSQSEKGKEAAGQVVDARSLARFKAEAPEPRAGVAGGHVPGSACLPFTKVLADGDV 310
BLAST of mRNA_H-elongata_contig153199.3512.1 vs. uniprot
Match: A0A836CBP8_9STRA (Rhodanese-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBP8_9STRA) HSP 1 Score: 221 bits (563), Expect = 2.500e-69 Identity = 107/169 (63.31%), Postives = 125/169 (73.96%), Query Frame = 1
Query: 1 IPSEDVFSSRVSELGISNDHTIVVYAKQGSFSAPRCWWTFRVFGHEEVYVLDGGFPAWEASGGRIESGEVKPTSTRPSSGLVQASGNAWKLNAKGFQARLNAPMLRTWRQVLSQVEQGNEAVGQIVDARSLARFRAEAPEPRAGLAGGHIPGSVSLPLTNVLEEGDVTK 507
+PS VFS +VS +GI ND ++VVYA +GSFSA RCWWTF+VFGH+ V+VLDGG PAW +GG +E GEVK RPS GLVQ SGN W LN K F+A L MLRTWRQVL + GQIVDARS+ARF+AEAPEPR GLAGGHIPGS+ +P T VL GD T+
Sbjct: 71 LPSAGVFSDKVSAMGIGNDQSVVVYAAEGSFSAARCWWTFKVFGHDAVHVLDGGLPAWVGAGGALEEGEVKGQDIRPSRGLVQKSGNTWLLNQKAFKATLRPQMLRTWRQVL---DASTARSGQIVDARSMARFKAEAPEPRPGLAGGHIPGSLCVPFTEVLMTGDWTR 236
BLAST of mRNA_H-elongata_contig153199.3512.1 vs. uniprot
Match: A0A4D9CV14_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CV14_9STRA) HSP 1 Score: 193 bits (490), Expect = 4.630e-58 Identity = 96/173 (55.49%), Postives = 116/173 (67.05%), Query Frame = 1
Query: 1 IPSEDVFSSRVSELGISNDHTIVVYAKQGSFSAPRCWWTFRVFGHEEVYVLDGGFPAWEASGGRIESGEVKPTSTRPSSGLVQASGNAWKLNAKGFQARLNAPMLRTWRQVLSQVEQGNEAVGQ----IVDARSLARFRAEAPEPRAGLAGGHIPGSVSLPLTNVLEEGDVTK 507
+PS FS VS LG+ N IVVY Q FSA RCWWTFR FGHE+VY+L GG PAW+A+GG+ E+G + +RP GLV+ GNAW L +GFQA+L A ++ +W+QVL VE G EA GQ I DAR RF AE EPR GLA GHIPGSV++P V EEGD T+
Sbjct: 76 LPSATAFSEAVSALGLENKDEIVVYTTQKCFSAARCWWTFRAFGHEKVYILQGGLPAWQAAGGKTETGPAQARPSRPPRGLVEQGGNAWLLQKQGFQAKLQADLVYSWQQVLKVVE-GEEAEGQKHHWIADARGPPRFNAEVDEPRPGLARGHIPGSVNVPFDRVFEEGDWTR 247
BLAST of mRNA_H-elongata_contig153199.3512.1 vs. uniprot
Match: W7TBX7_9STRA (3mercaptopyruvate sulfurtransferase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBX7_9STRA) HSP 1 Score: 192 bits (487), Expect = 1.440e-56 Identity = 95/173 (54.91%), Postives = 116/173 (67.05%), Query Frame = 1
Query: 1 IPSEDVFSSRVSELGISNDHTIVVYAKQGSFSAPRCWWTFRVFGHEEVYVLDGGFPAWEASGGRIESGEVKPTSTRPSSGLVQASGNAWKLNAKGFQARLNAPMLRTWRQVLSQVEQGNEAVGQ----IVDARSLARFRAEAPEPRAGLAGGHIPGSVSLPLTNVLEEGDVTK 507
+PS FS VS LG+ N IVVY Q FSA RCWWTFR FGHE+VY+L GG PAW+A+GG+ E+G + +RP GLV+ GNAW L +GFQA+L A ++ +W+QVL VE G EA GQ I DAR RF A+ EPR GLA GHIPGSV++P V EEGD T+
Sbjct: 159 LPSATAFSEAVSALGLENKDEIVVYTTQKCFSAARCWWTFRAFGHEKVYILQGGLPAWQAAGGKTETGPAQARPSRPPRGLVEQGGNAWLLQKQGFQAKLQADLVYSWQQVLKVVE-GEEAEGQKHHWIADARGPPRFNADVDEPRPGLARGHIPGSVNVPFDRVFEEGDWTR 330
BLAST of mRNA_H-elongata_contig153199.3512.1 vs. uniprot
Match: A0A835YFF8_9CHLO (Sulfurtransferase n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YFF8_9CHLO) HSP 1 Score: 144 bits (364), Expect = 1.830e-39 Identity = 78/168 (46.43%), Postives = 106/168 (63.10%), Query Frame = 1
Query: 1 IPSEDVFSSRVSELGISNDHTIVVYAKQGSFSAPRCWWTFRVFGHEEVYVLDGGFPAWEASGGRIESGEVKPTSTRPSSGLVQASGNAWKLNAKG---FQARLNAPMLRTWRQVLSQVEQGNEAVGQIVDARSLARFRAEAPEPRAGLAGGHIPGSVSLPLTNVLEEG 495
+PSE F++ + L ISND T+V+Y G FSAPR WWTF+VFGH++V VLDGG PAW+A G ++ S PS ++ A G A L K +QA+L+A +R+ Q+L+ ++ E Q++DARS RF PEPRAGL GGHIPG+ SLP +L+ G
Sbjct: 69 LPSEKGFAAAMDALSISNDSTVVIYDHLGIFSAPRVWWTFKVFGHDKVAVLDGGLPAWKAKGLPLDP------SPPPSDEVLFAGGRACALAGKAPTKYQAKLDASKVRSIDQMLANIQSRAE---QVMDARSAGRFVGTEPEPRAGLRGGHIPGARSLPFPTLLDNG 227
BLAST of mRNA_H-elongata_contig153199.3512.1 vs. uniprot
Match: E1ZQB1_CHLVA (Sulfurtransferase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZQB1_CHLVA) HSP 1 Score: 143 bits (361), Expect = 5.770e-39 Identity = 78/169 (46.15%), Postives = 101/169 (59.76%), Query Frame = 1
Query: 1 IPSEDVFSSRVSELGISNDHTIVVYAKQGSFSAPRCWWTFRVFGHEEVYVLDGGFPAWEASGGRIESGEVKPTSTRPSSGLVQASGNAWKLNAKGFQARLNAPMLRTWRQVLSQVEQGNEAVGQIVDARSLARFRAEAPEPRAGLAGGHIPGSVSLPLTNVLEEGDVTK 507
+PSE F++ LG+S D +VVY G F++PR WWT+ VFGH V VLDGG PAW+A+GG +E+ P V+A N A ++ARL+A +R+W+QVL V E Q+VDAR R+R EAPEPR GL GHIPGS +L NVL +G K
Sbjct: 76 LPSERQFAAAADALGVSRDDALVVYDNTGIFASPRAWWTWHVFGHPRVAVLDGGLPAWKAAGGDMET---SPMDNARMGAPVEALRNPPA--ATKYEARLDASQVRSWQQVLENVSSQQE---QVVDARPEPRWRGEAPEPRPGLKMGHIPGSKNLQWPNVLRDGSTLK 236
BLAST of mRNA_H-elongata_contig153199.3512.1 vs. uniprot
Match: A0A2P6VM40_9CHLO (Sulfurtransferase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VM40_9CHLO) HSP 1 Score: 148 bits (374), Expect = 3.070e-38 Identity = 77/165 (46.67%), Postives = 103/165 (62.42%), Query Frame = 1
Query: 1 IPSEDVFSSRVSELGISNDHTIVVYAKQGSFSAPRCWWTFRVFGHEEVYVLDGGFPAWEASGGRIESGEVKPTSTRPSSGLVQASGNAWKLNAKGFQARLNAPMLRTWRQVLSQVEQGNEAVGQIVDARSLARFRAEAPEPRAGLAGGHIPGSVSLPLTNVLEEG 495
+PSE F++ LG+S D +V+Y QG FS+ R WWT+ VFGH V VLDGG PAW+A+GG +E+ V + + ++A + + ARL+A +R W+QVL+ V E V VDAR AR+R EAPEPR GL GHIPGSVSL ++VL+EG
Sbjct: 1257 LPSERQFAAAADALGVSPDDRLVIYDNQGIFSSARAWWTWHVFGHTRVAVLDGGLPAWKAAGGALETSRVDEAALHAPAAALRAPPAS-----TSYPARLDAQQVRGWQQVLANVGSATELV---VDARPTARWRGEAPEPRPGLPSGHIPGSVSLQWSDVLQEG 1413
BLAST of mRNA_H-elongata_contig153199.3512.1 vs. uniprot
Match: UPI0005526B5C (3-mercaptopyruvate sulfurtransferase n=1 Tax=Edaphobacter aggregans TaxID=570835 RepID=UPI0005526B5C) HSP 1 Score: 139 bits (351), Expect = 1.060e-37 Identity = 73/165 (44.24%), Postives = 97/165 (58.79%), Query Frame = 1
Query: 1 IPSEDVFSSRVSELGISNDHTIVVYAKQGSFSAPRCWWTFRVFGHEEVYVLDGGFPAWEASGGRIESGEVKPTSTRPSSGLVQASGNAWKLNAKGFQARLNAPMLRTWRQVLSQVEQGNEAVGQIVDARSLARFRAEAPEPRAGLAGGHIPGSVSLPLTNVLEEG 495
+P+E+ FS +SE+G+ + TIVVY + G FSAPR WW R FG +EVYVLDGG PAW +G +ESGEVK S F ARL+ +R + QV + + + QI+DARS RF APEPRAG++ GH+PG+ S+P T + E G
Sbjct: 68 LPTEEEFSRSMSEMGMGDGMTIVVYEQVGVFSAPRAWWMLRTFGAKEVYVLDGGLPAWVEAGLPVESGEVKRESA-------------------SFTARLDRDAVRDFGQVQGMIARRTQETIQILDARSAGRFVGTAPEPRAGISSGHMPGATSVPFTELAEGG 213
BLAST of mRNA_H-elongata_contig153199.3512.1 vs. uniprot
Match: A0A7X0B5F2_9PROT (Sulfurtransferase n=1 Tax=Nitrospirillum iridis TaxID=765888 RepID=A0A7X0B5F2_9PROT) HSP 1 Score: 139 bits (349), Expect = 2.110e-37 Identity = 73/165 (44.24%), Postives = 96/165 (58.18%), Query Frame = 1
Query: 1 IPSEDVFSSRVSELGISNDHTIVVYAKQGSFSAPRCWWTFRVFGHEEVYVLDGGFPAWEASGGRIESGEVKPTSTRPSSGLVQASGNAWKLNAKGFQARLNAPMLRTWRQVLSQVEQGNEAVGQIVDARSLARFRAEAPEPRAGLAGGHIPGSVSLPLTNVLEEG 495
+P+ +VF+ V++LGI D T++VY FSA R WWTFRVFGH+ V+VLDGG P W A G +E+G P K A LN ++R VL+ VE+ V Q++DARS RF A APEPRAGL GGHIPGS ++P T+++ G
Sbjct: 68 LPTAEVFAQAVTDLGIGRDSTVIVYDVYDLFSAARVWWTFRVFGHDRVFVLDGGLPKWLAEGRPVEAGAASP-----------------KAAGVPITAHLNPALVRNADAVLANVER---KVEQVIDARSQGRFEATAPEPRAGLRGGHIPGSRNVPYTDLISGG 212
BLAST of mRNA_H-elongata_contig153199.3512.1 vs. uniprot
Match: A0A5J4XXK3_9CHLO (Sulfurtransferase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XXK3_9CHLO) HSP 1 Score: 139 bits (349), Expect = 8.030e-37 Identity = 75/165 (45.45%), Postives = 102/165 (61.82%), Query Frame = 1
Query: 1 IPSEDVFSSRVSELGISNDHTIVVYAKQGSFSAPRCWWTFRVFGHEEVYVLDGGFPAWEASGGRIESGEVKPTSTRPSSGLVQASGNAWKLNAKGFQARLNAPMLRTWRQVLSQVEQGNEAVGQIVDARSLARFRAEAPEPRAGLAGGHIPGSVSLPLTNVLEEG 495
+PSE F++ LGI+ND +VVY + G FSA R WWTF+VFGH++V VLDGG P W + G ++E P S G +QA+ N + A L +RT +QVL VE+ +E V VDAR+ ARF+A+APEPR G+ GGHIP S ++P ++L G
Sbjct: 115 LPSEQAFAAAADSLGIANDSQVVVYDRSGLFSAARVWWTFKVFGHQKVAVLDGGLPLWVSEGYKLEE---SPASDNEFDGPLQAAQRP-PANVH-YSAHLQKAEVRTLQQVLDNVEKQHELV---VDARAAARFQAKAPEPRPGMRGGHIPHSKNVPFDSLLSNG 271 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig153199.3512.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig153199.3512.1 >prot_H-elongata_contig153199.3512.1 ID=prot_H-elongata_contig153199.3512.1|Name=mRNA_H-elongata_contig153199.3512.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=170bp IPSEDVFSSRVSELGISNDHTIVVYAKQGSFSAPRCWWTFRVFGHEEVYVback to top mRNA from alignment at H-elongata_contig153199:36..1002+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig153199.3512.1 ID=mRNA_H-elongata_contig153199.3512.1|Name=mRNA_H-elongata_contig153199.3512.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=967bp|location=Sequence derived from alignment at H-elongata_contig153199:36..1002+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig153199:36..1002+ >mRNA_H-elongata_contig153199.3512.1 ID=mRNA_H-elongata_contig153199.3512.1|Name=mRNA_H-elongata_contig153199.3512.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1020bp|location=Sequence derived from alignment at H-elongata_contig153199:36..1002+ (Himanthalia elongata Himel1 dioecious)back to top |