mRNA_H-elongata_contig153189.3510.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig153189.3510.1 vs. uniprot
Match: A0A6H5KA14_9PHAE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA14_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 1.110e-21 Identity = 47/75 (62.67%), Postives = 57/75 (76.00%), Query Frame = 1
Query: 1 EVLRYRGMPKLDPKENPLKWWETTGASFLLLRELVTRVLCIPASSASSECLFSKAGLVSTNQRNRLKGTRVAQIV 225
EVLRYRG+ ++P NPL WW+ A+F LLREL R+LC+PASSA+SE LFSKAGL T QR+ L G RVAQ+V
Sbjct: 486 EVLRYRGVTSMNPDGNPLTWWDQHKATFPLLRELSHRILCVPASSAASERLFSKAGLTLTKQRSLLAGNRVAQLV 560
BLAST of mRNA_H-elongata_contig153189.3510.1 vs. uniprot
Match: D8LDT4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDT4_ECTSI) HSP 1 Score: 84.7 bits (208), Expect = 1.830e-17 Identity = 43/74 (58.11%), Postives = 54/74 (72.97%), Query Frame = 1
Query: 1 EVLRYRGMPKLDPKENPLKWWETTGA--SFLLLRELVTRVLCIPASSASSECLFSKAGLVSTNQRNRLKGTRVA 216
EVLRYR + K+D + +PL WWE SF LRELV RVLC+PA SASS+ +FSK GLV ++R RL+G+RVA
Sbjct: 824 EVLRYRALDKIDSEADPLLWWEQEQQRWSFPFLRELVMRVLCVPACSASSKRVFSKTGLVDNSKRARLRGSRVA 897
BLAST of mRNA_H-elongata_contig153189.3510.1 vs. uniprot
Match: A0A8D9E9A5_9HEMI (Zinc finger BED domain-containing protein 4 n=2 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D9E9A5_9HEMI) HSP 1 Score: 68.2 bits (165), Expect = 9.270e-12 Identity = 32/75 (42.67%), Postives = 48/75 (64.00%), Query Frame = 1
Query: 1 EVLRYRGMPKLDPKENPLKWWETTGASFLLLRELVTRVLCIPASSASSECLFSKAGLVSTNQRNRLKGTRVAQIV 225
E+ RY P +D +E+PL WW+ + + L E++T+ LCI A+S SE +FSK G + T +R+RL R AQI+
Sbjct: 249 EIDRYLNEPIIDRREDPLAWWDISKKVYPTLHEMMTKRLCIQATSVPSERIFSKGGEILTAKRSRLTNKRFAQII 323
BLAST of mRNA_H-elongata_contig153189.3510.1 vs. uniprot
Match: A0A6P7GHW3_DIAVI (zinc finger BED domain-containing protein 1-like n=1 Tax=Diabrotica virgifera virgifera TaxID=50390 RepID=A0A6P7GHW3_DIAVI) HSP 1 Score: 65.9 bits (159), Expect = 4.790e-11 Identity = 32/75 (42.67%), Postives = 49/75 (65.33%), Query Frame = 1
Query: 1 EVLRYRGMPKLDPKENPLKWWETTGASFLLLRELVTRVLCIPASSASSECLFSKAGLVSTNQRNRLKGTRVAQIV 225
E+ RY P L E+PLKWW A F L +LV + LCI A+S E FSKAGL+ T++R+R+K +++++++
Sbjct: 198 EIDRYIKEPILQRTEDPLKWWNDRQAIFPALVDLVKKRLCITATSVPCERQFSKAGLIMTDKRSRMKASKLSKVM 272
BLAST of mRNA_H-elongata_contig153189.3510.1 vs. uniprot
Match: A0A1X7UCW0_AMPQE (BED-type domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UCW0_AMPQE) HSP 1 Score: 65.5 bits (158), Expect = 1.070e-10 Identity = 30/75 (40.00%), Postives = 44/75 (58.67%), Query Frame = 1
Query: 1 EVLRYRGMPKLDPKENPLKWWETTGASFLLLRELVTRVLCIPASSASSECLFSKAGLVSTNQRNRLKGTRVAQIV 225
E+ RY P ++ NPL+WW+ F L ++ + LCIP SS SE LFSKAG + + +RNR+K + I+
Sbjct: 514 EIRRYFEEPNIERSFNPLEWWKANAIRFPRLSKIAAKYLCIPGSSVPSERLFSKAGQLVSERRNRIKPKNIDMIL 588
BLAST of mRNA_H-elongata_contig153189.3510.1 vs. uniprot
Match: UPI001EEADC39 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Homalodisca vitripennis TaxID=197043 RepID=UPI001EEADC39) HSP 1 Score: 65.5 bits (158), Expect = 1.070e-10 Identity = 34/74 (45.95%), Postives = 47/74 (63.51%), Query Frame = 1
Query: 4 VLRYRGMPKLDPKENPLKWWETTGASFLLLRELVTRVLCIPASSASSECLFSKAGLVSTNQRNRLKGTRVAQIV 225
+ +Y +P LD K NPL++WE F L +L LCIPA+S SSE LFSKAG+V+ +RNRL ++ I+
Sbjct: 557 INQYIELPYLDRKANPLQFWEERKHIFPSLYKLAQMYLCIPATSVSSERLFSKAGMVANERRNRLLPKKLDSIL 630
BLAST of mRNA_H-elongata_contig153189.3510.1 vs. uniprot
Match: UPI00106C4427 (zinc finger BED domain-containing protein 1-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C4427) HSP 1 Score: 65.1 bits (157), Expect = 1.320e-10 Identity = 33/75 (44.00%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 1 EVLRYRGMPKLDPKENPLKWWETTGASFLLLRELVTRVLCIPASSASSECLFSKAGLVSTNQRNRLKGTRVAQIV 225
E+ RY P +D ++PL+WW+ F LL + V R L IPASSA +E LFSKAG + T +R LK ++ +V
Sbjct: 282 EIARYLQFPTIDGDDDPLQWWKFHENDFPLLSQYVRRYLAIPASSAPTERLFSKAGQIVTAKRVNLKPSQANMLV 356
BLAST of mRNA_H-elongata_contig153189.3510.1 vs. uniprot
Match: A0A8J2QTV3_9NEOP ((African queen) hypothetical protein n=1 Tax=Danaus chrysippus TaxID=151541 RepID=A0A8J2QTV3_9NEOP) HSP 1 Score: 65.1 bits (157), Expect = 1.470e-10 Identity = 33/74 (44.59%), Postives = 47/74 (63.51%), Query Frame = 1
Query: 4 VLRYRGMPKLDPKENPLKWWETTGASFLLLRELVTRVLCIPASSASSECLFSKAGLVSTNQRNRLKGTRVAQIV 225
V +Y +P LD K +PL++W F L E+ + LCIPASS SE LFSKAG++ ++RNRL ++ QI+
Sbjct: 548 VKQYIELPYLDRKCDPLQFWNDKKCLFPRLSEIAQKYLCIPASSVPSERLFSKAGILCNDRRNRLAPKKIDQIL 621
BLAST of mRNA_H-elongata_contig153189.3510.1 vs. uniprot
Match: UPI0018D0C22E (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D0C22E) HSP 1 Score: 65.1 bits (157), Expect = 1.470e-10 Identity = 33/75 (44.00%), Postives = 49/75 (65.33%), Query Frame = 1
Query: 1 EVLRYRGMPKLDPKENPLKWWETTGASFLLLRELVTRVLCIPASSASSECLFSKAGLVSTNQRNRLKGTRVAQIV 225
+V +Y +P LD K +PLK+WE + L ++ + LCIPA+S SE +FSKAGL+ +RNRL+ +V QI+
Sbjct: 563 KVKQYVELPYLDRKADPLKFWELRKVTNNGLYKIALKYLCIPATSVPSERVFSKAGLLCNQRRNRLESKKVDQIL 637
BLAST of mRNA_H-elongata_contig153189.3510.1 vs. uniprot
Match: UPI0018E2124D (E3 SUMO-protein ligase ZBED1-like n=3 Tax=Acanthomorphata TaxID=123368 RepID=UPI0018E2124D) HSP 1 Score: 64.3 bits (155), Expect = 2.710e-10 Identity = 33/75 (44.00%), Postives = 44/75 (58.67%), Query Frame = 1
Query: 1 EVLRYRGMPKLDPKENPLKWWETTGASFLLLRELVTRVLCIPASSASSECLFSKAGLVSTNQRNRLKGTRVAQIV 225
E+ Y P +D +++PL WW +F L L + LCIPA+SA SE LFS +G + T QR LK TRV +V
Sbjct: 416 ELDNYLITPSIDGEQDPLAWWRVHNVNFPWLSRLARKYLCIPATSAPSERLFSASGNIVTCQRASLKPTRVDMLV 490 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig153189.3510.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig153189.3510.1 >prot_H-elongata_contig153189.3510.1 ID=prot_H-elongata_contig153189.3510.1|Name=mRNA_H-elongata_contig153189.3510.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=68bp MPKLDPKENPLKWWETTGASFLLLRELVTRVLCIPASSASSECLFSKAGLback to top mRNA from alignment at H-elongata_contig153189:372..596- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig153189.3510.1 ID=mRNA_H-elongata_contig153189.3510.1|Name=mRNA_H-elongata_contig153189.3510.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=225bp|location=Sequence derived from alignment at H-elongata_contig153189:372..596- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig153189:372..596- >mRNA_H-elongata_contig153189.3510.1 ID=mRNA_H-elongata_contig153189.3510.1|Name=mRNA_H-elongata_contig153189.3510.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=408bp|location=Sequence derived from alignment at H-elongata_contig153189:372..596- (Himanthalia elongata Himel1 dioecious)back to top |