prot_H-elongata_contig152928.3498.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig152928.3498.1
Unique Nameprot_H-elongata_contig152928.3498.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length61
Homology
BLAST of mRNA_H-elongata_contig152928.3498.1 vs. uniprot
Match: D7FHS8_ECTSI (SNF2 helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHS8_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 8.900e-22
Identity = 43/51 (84.31%), Postives = 50/51 (98.04%), Query Frame = 0
Query:    7 VEANHVFMLEPLLNAAIEAQAINRVHRGGQTRPTTVHRLVVRGTVEEEIER 57
            VEANHVF+LEPLLNAA+EAQA+NRVHRGGQTRPTT+HR +VRGT+EE+IER
Sbjct: 2187 VEANHVFLLEPLLNAAVEAQAVNRVHRGGQTRPTTIHRFIVRGTIEEDIER 2237          
BLAST of mRNA_H-elongata_contig152928.3498.1 vs. uniprot
Match: A0A6H5JYY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYY0_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 3.090e-21
Identity = 42/51 (82.35%), Postives = 50/51 (98.04%), Query Frame = 0
Query:    7 VEANHVFMLEPLLNAAIEAQAINRVHRGGQTRPTTVHRLVVRGTVEEEIER 57
            VEANHVF+LEPLLNAA+EAQA+NRVHRGGQ+RPTT+HR +VRGT+EE+IER
Sbjct: 2094 VEANHVFLLEPLLNAAVEAQAVNRVHRGGQSRPTTIHRFIVRGTIEEDIER 2144          
BLAST of mRNA_H-elongata_contig152928.3498.1 vs. uniprot
Match: A0A7S4D6P5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6P5_HETAK)

HSP 1 Score: 76.6 bits (187), Expect = 4.550e-16
Identity = 35/50 (70.00%), Postives = 43/50 (86.00%), Query Frame = 0
Query:    8 EANHVFMLEPLLNAAIEAQAINRVHRGGQTRPTTVHRLVVRGTVEEEIER 57
            EA HVF+LEP+LN A+EAQA+NRVHR GQTRPT VHR +V+ T+EE IE+
Sbjct:   98 EATHVFLLEPVLNPALEAQAVNRVHRVGQTRPTRVHRYIVQDTIEERIEQ 147          
BLAST of mRNA_H-elongata_contig152928.3498.1 vs. uniprot
Match: A0A836C7R9_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7R9_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.500e-15
Identity = 35/50 (70.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:    7 VEANHVFMLEPLLNAAIEAQAINRVHRGGQTRPTTVHRLVVRGTVEEEIE 56
            VEA HVF+LEP++NAA+EAQA+NRVHR GQTR TTVHR +++ T+EE+IE
Sbjct: 2293 VEAQHVFLLEPIMNAAVEAQAVNRVHRIGQTRQTTVHRYIIQDTIEEKIE 2342          
BLAST of mRNA_H-elongata_contig152928.3498.1 vs. uniprot
Match: R1DDS5_EMIHU (Uncharacterized protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DDS5_EMIHU)

HSP 1 Score: 72.4 bits (176), Expect = 1.820e-15
Identity = 34/49 (69.39%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    7 VEANHVFMLEPLLNAAIEAQAINRVHRGGQTRPTTVHRLVVRGTVEEEI 55
            VEA HVF+ EPLL  A+EAQA+ RVHR  QTRPT VHR V+RGT+EE I
Sbjct:   24 VEAQHVFLSEPLLERAVEAQAVGRVHRMSQTRPTVVHRFVMRGTIEEAI 72          
BLAST of mRNA_H-elongata_contig152928.3498.1 vs. uniprot
Match: W7U2C9_9STRA (Snf2 histone linker phd ring helicase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2C9_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.800e-15
Identity = 35/51 (68.63%), Postives = 43/51 (84.31%), Query Frame = 0
Query:    7 VEANHVFMLEPLLNAAIEAQAINRVHRGGQTRPTTVHRLVVRGTVEEEIER 57
            VEANHVF+LEP+ NAA EAQA+NRV R GQT+PT +HR VVR T+EE +E+
Sbjct: 2087 VEANHVFLLEPIFNAATEAQAVNRVFRIGQTKPTVIHRFVVRNTIEENVEK 2137          
BLAST of mRNA_H-elongata_contig152928.3498.1 vs. uniprot
Match: A0A7S3AJT2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AJT2_9EUKA)

HSP 1 Score: 72.4 bits (176), Expect = 1.410e-14
Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    7 VEANHVFMLEPLLNAAIEAQAINRVHRGGQTRPTTVHRLVVRGTVEEEIER 57
            VEA HVF++EPLLN+A+EAQA+ RVHR  Q R TTVHR +V GTVEE I +
Sbjct:   61 VEAQHVFLVEPLLNSAVEAQAVGRVHRMSQLRATTVHRFIVAGTVEEAIHK 111          
BLAST of mRNA_H-elongata_contig152928.3498.1 vs. uniprot
Match: A0A7S1CZ64_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZ64_CYCTE)

HSP 1 Score: 70.1 bits (170), Expect = 2.990e-14
Identity = 30/51 (58.82%), Postives = 43/51 (84.31%), Query Frame = 0
Query:    7 VEANHVFMLEPLLNAAIEAQAINRVHRGGQTRPTTVHRLVVRGTVEEEIER 57
            VEA HVFM+EP+LN  +++QAINR+HR GQT  T VHR +++GT+EE+I++
Sbjct:    6 VEATHVFMVEPMLNCGLDSQAINRIHRIGQTSTTYVHRYLIQGTIEEKIDK 56          
BLAST of mRNA_H-elongata_contig152928.3498.1 vs. uniprot
Match: A0A2R5GD12_9STRA (E3 ubiquitin-protein ligase SHPRH n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GD12_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 6.330e-14
Identity = 34/50 (68.00%), Postives = 42/50 (84.00%), Query Frame = 0
Query:    8 EANHVFMLEPLLNAAIEAQAINRVHRGGQTRPTTVHRLVVRGTVEEEIER 57
            EA+HVF++EP++N AIEAQAI R+HR GQTRPT VHR +VR TVEE I +
Sbjct: 1621 EASHVFLVEPIMNPAIEAQAIGRIHRMGQTRPTHVHRFLVRNTVEERIHK 1670          
BLAST of mRNA_H-elongata_contig152928.3498.1 vs. uniprot
Match: A0A8K0NXA4_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0NXA4_LADFU)

HSP 1 Score: 70.9 bits (172), Expect = 6.920e-14
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 0
Query:    7 VEANHVFMLEPLLNAAIEAQAINRVHRGGQTRPTTVHRLVVRGTVEEEI 55
            +EA HV ++EP+LN A+E QAI RVHR GQTRPT VHRL+VR T+EE +
Sbjct:   55 IEATHVILVEPILNQAMELQAIGRVHRIGQTRPTVVHRLIVRDTIEERM 103          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig152928.3498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHS8_ECTSI8.900e-2284.31SNF2 helicase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6H5JYY0_9PHAE3.090e-2182.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4D6P5_HETAK4.550e-1670.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A836C7R9_9STRA1.500e-1570.00SNF2 family N-terminal domain-containing protein n... [more]
R1DDS5_EMIHU1.820e-1569.39Uncharacterized protein (Fragment) n=1 Tax=Emilian... [more]
W7U2C9_9STRA2.800e-1568.63Snf2 histone linker phd ring helicase n=2 Tax=Mono... [more]
A0A7S3AJT2_9EUKA1.410e-1466.67Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S1CZ64_CYCTE2.990e-1458.82Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A2R5GD12_9STRA6.330e-1468.00E3 ubiquitin-protein ligase SHPRH n=1 Tax=Hondaea ... [more]
A0A8K0NXA4_LADFU6.920e-1465.31Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 2..59
e-value: 8.8E-18
score: 66.3
NoneNo IPR availablePANTHERPTHR45865FAMILY NOT NAMEDcoord: 7..57
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig152928contigH-elongata_contig152928:531..713 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig152928.3498.1mRNA_H-elongata_contig152928.3498.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig152928 531..713 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig152928.3498.1 ID=prot_H-elongata_contig152928.3498.1|Name=mRNA_H-elongata_contig152928.3498.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=61bp
MNLHEQVEANHVFMLEPLLNAAIEAQAINRVHRGGQTRPTTVHRLVVRGT
VEEEIERQDI*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase