prot_H-elongata_contig152677.3480.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig152677.3480.1
Unique Nameprot_H-elongata_contig152677.3480.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length133
Homology
[Close]
BLAST of mRNA_H-elongata_contig152677.3480.1 vs. uniprot
Match: D7FWD1_ECTSI (Clathrin heavy chain n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWD1_ECTSI)

HSP 1 Score: 246 bits (629), Expect = 3.470e-73
Identity = 124/131 (94.66%), Postives = 129/131 (98.47%), Query Frame = 0 
Query:    1 NVAAVNEALNELYIEDEDHEKLRESVDDYDNFDQVALAQKTEKHELLEFRRVSAYVYKKNRRFQQSVGLSKGDKMYKDAIDTAAESGDTSLAEDLLSFFVNIGDKECFCAALYTCYSLIRPDVAMELAWRN 131
            NVAAVNEAL+ELYIEDEDHEKLRESVDDYDNFDQVALAQ+ EKHELLEFRR+SAYVYKKNRRFQQSV LSKGDKMYKDAIDTAAESGD+SLAEDLLSFFVNIGDKECFCAALYTCYSL+RPDVAMELAWRN
Sbjct: 1445 NVAAVNEALSELYIEDEDHEKLRESVDDYDNFDQVALAQRIEKHELLEFRRISAYVYKKNRRFQQSVALSKGDKMYKDAIDTAAESGDSSLAEDLLSFFVNIGDKECFCAALYTCYSLVRPDVAMELAWRN 1575
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BLAST of mRNA_H-elongata_contig152677.3480.1 vs. uniprot
Match: A0A835YZH1_9STRA (Clathrin heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZH1_9STRA)

HSP 1 Score: 226 bits (575), Expect = 6.460e-66
Identity = 110/131 (83.97%), Postives = 123/131 (93.89%), Query Frame = 0 
Query:    1 NVAAVNEALNELYIEDEDHEKLRESVDDYDNFDQVALAQKTEKHELLEFRRVSAYVYKKNRRFQQSVGLSKGDKMYKDAIDTAAESGDTSLAEDLLSFFVNIGDKECFCAALYTCYSLIRPDVAMELAWRN 131
            N+AAVNEALNELYIEDEDHE+LR+S+D++ NFDQ+ALAQ+ EKHELLEFRR+SAYVYKKNRRFQQSV LSKGDKMYKDAIDTAA+SGD+ LAEDLL FFVNIGDKECFCA LYT Y L++PDVAMELAWRN
Sbjct: 1486 NIAAVNEALNELYIEDEDHERLRQSLDEFGNFDQIALAQRIEKHELLEFRRISAYVYKKNRRFQQSVALSKGDKMYKDAIDTAAQSGDSELAEDLLRFFVNIGDKECFCAMLYTAYGLVKPDVAMELAWRN 1616
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BLAST of mRNA_H-elongata_contig152677.3480.1 vs. uniprot
Match: A0A7S2V2H1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2H1_9STRA)

HSP 1 Score: 207 bits (528), Expect = 4.310e-64
Identity = 101/131 (77.10%), Postives = 118/131 (90.08%), Query Frame = 0 
Query:    1 NVAAVNEALNELYIEDEDHEKLRESVDDYDNFDQVALAQKTEKHELLEFRRVSAYVYKKNRRFQQSVGLSKGDKMYKDAIDTAAESGDTSLAEDLLSFFVNIGDKECFCAALYTCYSLIRPDVAMELAWRN 131
            N+ AVNEALNELYIEDED+E LR S+DDY+NFDQ+ALAQK EKHELLEFRR++AY+YKKN+R+ QSV +SK DKM+KDAIDTAAES D   AE+LL+FFV+I DKECFCA LYTC+SL+RPDVAMELAWRN
Sbjct:  137 NLTAVNEALNELYIEDEDYESLRSSIDDYNNFDQIALAQKVEKHELLEFRRIAAYLYKKNKRYNQSVQISKEDKMFKDAIDTAAESQDQECAEELLAFFVSIRDKECFCACLYTCFSLVRPDVAMELAWRN 267
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BLAST of mRNA_H-elongata_contig152677.3480.1 vs. uniprot
Match: F0XZJ1_AURAN (Clathrin heavy chain n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZJ1_AURAN)

HSP 1 Score: 201 bits (511), Expect = 2.670e-57
Identity = 94/131 (71.76%), Postives = 118/131 (90.08%), Query Frame = 0 
Query:    1 NVAAVNEALNELYIEDEDHEKLRESVDDYDNFDQVALAQKTEKHELLEFRRVSAYVYKKNRRFQQSVGLSKGDKMYKDAIDTAAESGDTSLAEDLLSFFVNIGDKECFCAALYTCYSLIRPDVAMELAWRN 131
            N+ AVN+A+NELY +DED+E LR+S+DD+DNFD +ALAQK EKHELLEFRR++AY+YKKN+R+Q+SV LSK DKMYKD+IDT AESGD+ +AEDLL FFV++ DKECFCA LYTCY +I+PDVA+ELAWR+
Sbjct: 1465 NLTAVNDAVNELYADDEDYEALRQSIDDFDNFDHIALAQKIEKHELLEFRRIAAYIYKKNKRWQKSVQLSKADKMYKDSIDTCAESGDSEIAEDLLRFFVDVCDKECFCATLYTCYKVIKPDVAIELAWRS 1595
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BLAST of mRNA_H-elongata_contig152677.3480.1 vs. uniprot
Match: A0A7S2SN96_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN96_9STRA)

HSP 1 Score: 192 bits (487), Expect = 2.820e-57
Identity = 96/131 (73.28%), Postives = 111/131 (84.73%), Query Frame = 0 
Query:    1 NVAAVNEALNELYIEDEDHEKLRESVDDYDNFDQVALAQKTEKHELLEFRRVSAYVYKKNRRFQQSVGLSKGDKMYKDAIDTAAESGDTSLAEDLLSFFVNIG-DKECFCAALYTCYSLIRPDVAMELAWR 130
            N  AVNEALN+LYIE+ED   LR S+DDYD+FDQ+ LAQK EKHELLEFRR++AY++KKN+RF QS+ LSKGDKMYKDAIDTAAESGD  L E LL FFV    DKECFCA LYTCY+L++PDVA+ELAWR
Sbjct:  186 NAPAVNEALNDLYIEEEDFASLRASIDDYDHFDQIVLAQKVEKHELLEFRRIAAYLFKKNKRFPQSIELSKGDKMYKDAIDTAAESGDPELVETLLRFFVEEQKDKECFCATLYTCYTLVQPDVALELAWR 316
[Close]
BLAST of mRNA_H-elongata_contig152677.3480.1 vs. uniprot
Match: A0A024U3J7_9STRA (Clathrin heavy chain n=10 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024U3J7_9STRA)

HSP 1 Score: 198 bits (504), Expect = 2.340e-56
Identity = 95/131 (72.52%), Postives = 114/131 (87.02%), Query Frame = 0 
Query:    1 NVAAVNEALNELYIEDEDHEKLRESVDDYDNFDQVALAQKTEKHELLEFRRVSAYVYKKNRRFQQSVGLSKGDKMYKDAIDTAAESGDTSLAEDLLSFFVNIGDKECFCAALYTCYSLIRPDVAMELAWRN 131
            N++AVNEALNE+ +EDED++ LR+S+D YDNFDQ++ AQK EKHELLEFRR++AY+YKKN+R+ QS+ LSK DKMYKDAIDTA +SGD  LAEDLL FFV   DKECFCA L+TCY LI+PDVAMELAWRN
Sbjct: 1470 NLSAVNEALNEILVEDEDYQALRDSIDSYDNFDQISFAQKVEKHELLEFRRIAAYLYKKNKRYGQSLKLSKADKMYKDAIDTAFDSGDVELAEDLLRFFVAAHDKECFCATLFTCYKLIKPDVAMELAWRN 1600
[Close]
BLAST of mRNA_H-elongata_contig152677.3480.1 vs. uniprot
Match: A0A7S2FBE3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FBE3_9STRA)

HSP 1 Score: 185 bits (470), Expect = 5.220e-56
Identity = 89/131 (67.94%), Postives = 109/131 (83.21%), Query Frame = 0 
Query:    1 NVAAVNEALNELYIEDEDHEKLRESVDDYDNFDQVALAQKTEKHELLEFRRVSAYVYKKNRRFQQSVGLSKGDKMYKDAIDTAAESGDTSLAEDLLSFFVNIGDKECFCAALYTCYSLIRPDVAMELAWRN 131
            N+ AVNEALNELYIE+ED+  LR S+DD+DNFDQ+ALAQKTEKHELLEFRR++AY+YK+N R+ QS+ LSKGDKM+KDAI+T  +S    L E+LL +FV   DKECFCA L+TCY  + PDVA+ELAWRN
Sbjct:   88 NLTAVNEALNELYIEEEDYPSLRTSIDDFDNFDQLALAQKTEKHELLEFRRIAAYLYKRNTRYAQSIELSKGDKMFKDAIETTNDSKSAELVEELLRYFVEQEDKECFCATLFTCYQYVSPDVAIELAWRN 218
[Close]
BLAST of mRNA_H-elongata_contig152677.3480.1 vs. uniprot
Match: A0A3R6ZXA9_9STRA (Clathrin-link domain-containing protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6ZXA9_9STRA)

HSP 1 Score: 197 bits (500), Expect = 8.170e-56
Identity = 95/131 (72.52%), Postives = 113/131 (86.26%), Query Frame = 0 
Query:    1 NVAAVNEALNELYIEDEDHEKLRESVDDYDNFDQVALAQKTEKHELLEFRRVSAYVYKKNRRFQQSVGLSKGDKMYKDAIDTAAESGDTSLAEDLLSFFVNIGDKECFCAALYTCYSLIRPDVAMELAWRN 131
            N++AVNEALNE+ +EDED+  LR+S+D YDNFDQ++ AQK EKHELLEFRR++AY+YKKN+R+ QS+ LSK DKMYKDAIDTA +SGD  LAEDLL FFV   DKECFCA L+TCY LI+PDVAMELAWRN
Sbjct: 2006 NLSAVNEALNEILVEDEDYAGLRDSIDSYDNFDQISFAQKVEKHELLEFRRIAAYLYKKNKRYGQSLKLSKADKMYKDAIDTAFDSGDAELAEDLLRFFVAAHDKECFCATLFTCYKLIKPDVAMELAWRN 2136
[Close]
BLAST of mRNA_H-elongata_contig152677.3480.1 vs. uniprot
Match: A0A7S2MBB9_9STRA (Clathrin heavy chain n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MBB9_9STRA)

HSP 1 Score: 195 bits (495), Expect = 3.820e-55
Identity = 94/132 (71.21%), Postives = 113/132 (85.61%), Query Frame = 0 
Query:    1 NVAAVNEALNELYIEDEDHEKLRESVDDYDNFDQVALAQKTEKHELLEFRRVSAYVYKKNRRFQQSVGLSKGDKMYKDAIDTAAESGDTSLAEDLLSFFVNIGDKECFCAALYTCYSLIRPDVAMELAWRNK 132
            N+ AVNEALNELYIE+ED++ +R S+D+YDNFDQ+ LAQKTEKHELLEFRR++AY+YK+N+R+ QS+ LSKGDKM+KDAIDTAAES    L E LL +FV   DKECFCA LYTCY L+ PDVA+ELAWRNK
Sbjct: 1491 NLTAVNEALNELYIEEEDYQNVRTSIDEYDNFDQIYLAQKTEKHELLEFRRIAAYLYKRNKRYGQSIELSKGDKMFKDAIDTAAESESAELVEALLRYFVEQTDKECFCATLYTCYDLVLPDVALELAWRNK 1622
[Close]
BLAST of mRNA_H-elongata_contig152677.3480.1 vs. uniprot
Match: K3WLC2_GLOUD (Clathrin heavy chain n=31 Tax=Oomycota TaxID=4762 RepID=K3WLC2_GLOUD)

HSP 1 Score: 194 bits (492), Expect = 9.680e-55
Identity = 93/131 (70.99%), Postives = 112/131 (85.50%), Query Frame = 0 
Query:    1 NVAAVNEALNELYIEDEDHEKLRESVDDYDNFDQVALAQKTEKHELLEFRRVSAYVYKKNRRFQQSVGLSKGDKMYKDAIDTAAESGDTSLAEDLLSFFVNIGDKECFCAALYTCYSLIRPDVAMELAWRN 131
            N++AVNEALNE+ +EDED+  LRES+D YDNFDQ+ LAQK EKHELLEFRR++AY+Y+KN+R+ QSV LSK DKMYKD ID AA+S D  LAED+L FFV + DKECFCA L+TCY LI+PDVA+ELAWRN
Sbjct: 1473 NLSAVNEALNEILVEDEDYVSLRESIDSYDNFDQITLAQKLEKHELLEFRRIAAYLYRKNKRYTQSVKLSKLDKMYKDCIDCAADSDDPELAEDILRFFVTVHDKECFCATLFTCYKLIKPDVALELAWRN 1603
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig152677.3480.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWD1_ECTSI3.470e-7394.66Clathrin heavy chain n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835YZH1_9STRA6.460e-6683.97Clathrin heavy chain n=1 Tax=Tribonema minus TaxID... [more]
A0A7S2V2H1_9STRA4.310e-6477.10Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
F0XZJ1_AURAN2.670e-5771.76Clathrin heavy chain n=1 Tax=Aureococcus anophagef... [more]
A0A7S2SN96_9STRA2.820e-5773.28Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A024U3J7_9STRA2.340e-5672.52Clathrin heavy chain n=10 Tax=Saprolegniaceae TaxI... [more]
A0A7S2FBE3_9STRA5.220e-5667.94Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A3R6ZXA9_9STRA8.170e-5672.52Clathrin-link domain-containing protein n=8 Tax=Ap... [more]
A0A7S2MBB9_9STRA3.820e-5571.21Clathrin heavy chain n=1 Tax=Dictyocha speculum Ta... [more]
K3WLC2_GLOUD9.680e-5570.99Clathrin heavy chain n=31 Tax=Oomycota TaxID=4762 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000547Clathrin, heavy chain/VPS, 7-fold repeatSMARTSM00299CLH_2coord: 1..124
e-value: 7.9E-5
score: 32.0
IPR000547Clathrin, heavy chain/VPS, 7-fold repeatPFAMPF00637Clathrincoord: 3..107
e-value: 5.5E-23
score: 81.4
IPR000547Clathrin, heavy chain/VPS, 7-fold repeatPROSITEPS50236CHCRcoord: 1..108
score: 23.248
NoneNo IPR availableGENE3D1.25.40.730coord: 70..132
e-value: 2.3E-27
score: 96.5
NoneNo IPR availablePANTHERPTHR10292CLATHRIN HEAVY CHAIN RELATEDcoord: 1..132
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..64
e-value: 3.1E-24
score: 87.4
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 3..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig152677contigH-elongata_contig152677:174..1323 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig152677.3480.1mRNA_H-elongata_contig152677.3480.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig152677 174..1323 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig152677.3480.1 ID=prot_H-elongata_contig152677.3480.1|Name=mRNA_H-elongata_contig152677.3480.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=133bp
NVAAVNEALNELYIEDEDHEKLRESVDDYDNFDQVALAQKTEKHELLEFR
RVSAYVYKKNRRFQQSVGLSKGDKMYKDAIDTAAESGDTSLAEDLLSFFV
NIGDKECFCAALYTCYSLIRPDVAMELAWRNK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000547Clathrin_H-chain/VPS_repeat
IPR011990TPR-like_helical_dom_sf
IPR016024ARM-type_fold