mRNA_H-elongata_contig15258.3472.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig15258.3472.1 vs. uniprot
Match: A0A6H5JP79_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JP79_9PHAE) HSP 1 Score: 687 bits (1773), Expect = 1.910e-234 Identity = 347/566 (61.31%), Postives = 442/566 (78.09%), Query Frame = 1
Query: 1 SRWITRVWFALYWTTFLLAWVVIPILYQSWRRGELTWKERLRSAVRMNIRQYLFMALVLVLFVVYLVGSGKVNAGKVGGFLMALANTYGLVFIILLLGHGLVQVPRKLWETSFNERELQRHYFIATKVDTDMQDAVFDLEEAEDHIDCMEKSMEAEECVLPGDRPQLIGILAAIRKTETAFYDEIDDGLLRKASVPLAHENRKPNDTRTPAEAFRDLGLVILTPRDAAKLHSELRAAQVKVVAMKTKWAKLVRNTDKLQCLLD-EIPWGEAVFETAPGKTVVQYLKMVLKRIQNRSWWIWQAYVRWLCCRTLAVLCAVLSAAIVWSEVVGASRWNLSPFGILLWFMFRQEAGIAHALSMQAAVLVPFLYMSLCGYRSLFTLRIFGSFALQGGHHSLSGPLLINAQYLIRLQFPLGYNFLRILRYKSSASSGIPGLQLPAFDMLMTEMKTVPVLGTDFNIYAPMLLLVLCMFTFYKGYARTLRLVGLEHEDLVSLDDPDGNARLEEGRALLERGKRQAQVVALKSKGERDDQTP--NSSPTRRGMWNVAPPVAYSKIEDTSSKPKLD 1689
S W+TRVW+A+YWTTFLLAWV++PILYQ+W GELTW ER+R AVR+NI+QYL MA++LV+FVVYLV SG+ +AG V GFLMALANTYGL+FIILLLG GL+QVPR+LWETSFNE ELQR YF AT+VDTD D++F+LE E ++D ME++M+ ++ DR + +L++ R T+ AF+ E DDG + + +++ +D RTP +A +DLG+ L+PRDAA+LHS LRAAQV VVA + KWA L++ TD L C+++ EIPWG+AV ET P ++V +L+ VL+R NR+ W+W+AY+R L C+ LA+LCA LS I+WSEV+ ASRWNLSPFGILL M++QEAGI HALSMQAAVLVPFLYMSLC YRSLFTLRIFG+F+LQGGHH+L GPLL NAQYLIRLQFPLGYNF+R+LRY + S+ +P L LPAF LM +M TVPVLGT F +YAP++L+VLC FT+YKGYAR LRLVGLEH DLVS+DDP GNAR++EGR L+ERGKRQAQV+A + + Q+P +S T+ P YSK++D S P ++
Sbjct: 75 SLWMTRVWYAVYWTTFLLAWVILPILYQAWNAGELTWAERIRRAVRLNIKQYLAMAVLLVVFVVYLVVSGQTSAGSVSGFLMALANTYGLLFIILLLGQGLIQVPRQLWETSFNETELQRLYFNATQVDTDKHDSLFELETLERNLDSMERAMDIKKHWCIKDRAHMKNMLSSARATDEAFHLETDDGSFQTTRFRGKNGSKRWDDGRTPEDALKDLGVSRLSPRDAARLHSSLRAAQVNVVASRMKWAALLKETDTLLCIVNNEIPWGDAVCETTPEESVCHFLRTVLRRTGNRAGWVWRAYLRALVCKALALLCAGLSGVILWSEVMAASRWNLSPFGILLRLMYQQEAGIGHALSMQAAVLVPFLYMSLCCYRSLFTLRIFGTFSLQGGHHTLPGPLLFNAQYLIRLQFPLGYNFMRMLRYYGTRSASVPALSLPAFQKLMNDMSTVPVLGTGFTVYAPLVLVVLCAFTYYKGYARVLRLVGLEHVDLVSMDDPGGNARVDEGRELVERGKRQAQVLAARRRDATVQQSPPSDSPSTKDEPGGYVAPSLYSKVDDGCSSPDVE 640
BLAST of mRNA_H-elongata_contig15258.3472.1 vs. uniprot
Match: A0A835ZCR5_9STRA (LMBR1-like membrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCR5_9STRA) HSP 1 Score: 381 bits (978), Expect = 2.840e-117 Identity = 218/518 (42.08%), Postives = 320/518 (61.78%), Query Frame = 1
Query: 1 SRWITRVWFALYWTTFLLAWVVIPILYQSWRRGELTWKERLRSAVRMNIRQYLFMALVLVLFVVYLVGSGKVNAGKVGGFLMALANTYGLVFIILLLGHGLVQVPRKLWETSFNERELQRHYFIATKVDTDMQDAVFDLEEAEDHIDCMEKSMEAEEC-VLPGDRPQLIGILAAIRKTETAFYDEIDDGLLRKASVPLAHENRKPNDTRTPAEAFRDLGLVILTPRDAAKLHSELRAAQVKVVAMKTKWAKLVRNTDKLQCLLD-EIPWGEAVFETAPGKTVVQYLKMVLKRIQNRSWWIWQAYVRWLCCRTLAVLCAVLSAAIVWSEVVGASRWNLSPFGILLWFMFRQEAGIAHALSMQAAVLVPFLYMSLCGYRSLFTLRIFGSFALQGGHHSLSGPLLINAQYLIRLQFPLGYNFLRILRYKSSASSGIPGLQLPAFDMLMTEMKTVPVLGTDFNIYAPMLLLVLCMFTFYKGYARTLRLVGLEHEDLVSLDDPDGNARLEEGRALLERGKRQA 1548
S W+ W+ +YW+TF+LAW+V+PI+ +W GELTW++R+++A+R N+ Y+ MA+ + V YL+ G + GFLMA NTYGL+ I+LL+GHGLV+VPR+LW TSF ER+LQ YF AT++DT + DA++DLE+AE + ++++ + + ++ ++ + AI+ T F ++ + + P A N+ +P A + + + LHS LR Q KVVA + +W L+ L+ ++ ++P ++V G ++ ++ R+ W W+ ++ R AVLC VLSA ++WSEV A+ +LSPFG ++ Q L +QAA L+PFLYMSLC YRSLF LR+ S AL G H SL G L+ NAQYL+RLQFPLGYNFL +L Y+ LQ AF+ LM+ M VP+LGTDFNIYAP++++VLC+FT GYAR LR+VG+EHEDL D +G R++EG++L+ERGKRQA
Sbjct: 37 SAWLGYAWYTVYWSTFVLAWLVMPIMNAAWAAGELTWRKRIKAAIRANVLTYIAMAVGGIAAVGYLLVRGIATKDTLSGFLMAWGNTYGLMLIVLLMGHGLVEVPRQLWITSFPERQLQLLYFRATQIDTSLYDAIYDLEDAEKEFEKIQRAHRSGGGDAMTREQAKMSLYIEAIQATRDKF--DLSAAGNGRTARPAA------NNIDSPLPAKKAKKKQLTPVGELVSLHSRLRNGQEKVVAGRQRWEDLMNQVALLELIVSKQLPRPQSV-TAGRGSNPLKRFATFVQLKSARALWFWRLHLEHRVLRLTAVLCFVLSAMVIWSEVALAAPVDLSPFGKII-----QSFEGKSPLLIQAAALIPFLYMSLCCYRSLFKLRLLSSLALNGPHQSLPGQLMFNAQYLVRLQFPLGYNFLTLLHYEKGM------LQHIAFNKLMSNMSVVPLLGTDFNIYAPLIMVVLCLFTACHGYARLLRMVGIEHEDLQCATDKEGQERMDEGKSLIERGKRQA 534
BLAST of mRNA_H-elongata_contig15258.3472.1 vs. uniprot
Match: W7TPT9_9STRA (LMBR1-like membrane protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPT9_9STRA) HSP 1 Score: 298 bits (764), Expect = 2.890e-85 Identity = 187/515 (36.31%), Postives = 288/515 (55.92%), Query Frame = 1
Query: 7 WITRVWFALYWTTFLLAWVVIPILYQSWRRGELTWKERLRSAVRMNIRQYLFMALVLVLFVVYLVGSGKVNAGKVGGFLMALANTYGLVFIILLLGHGLVQVPRKLWETSFNERELQRHYFIATKVDTDMQDAVFDLEEAEDHIDCMEKSME-----AEECVLPGDRPQLIGILAAIRKTETAFYDEIDDGLLRKASVPLAHENRKPNDTRTPAEAFRDLGLVILTPRDAAKLHSELRAAQVKVVAMKTKWAKLVRNTDKLQCLLD-EIPWGEAVFETAPGKTVVQYLKMVLKRIQNRSWWIWQAYVRWLCCRTLAVLCAVLSAAIVWSEVVGASRWNLSPFGILLWFMFRQEAGIAHALSMQAAVLVPFLYMSLCGYRSLFTLRIFGSFALQGGHHSLSGPLLINAQYLIRLQFPLGYNFLRILRYKSSASSGIPGLQLPAFDMLMTEMKTVPVLGTDFNIYAPMLLLVLCMFTFYKGYARTLRLVGLEHEDLVSLDDPDGNARLEEGRALLER 1533
WI +VW +YW+TF+L W+V+PI++ G T ++R+ A+R +R + LV F +YLV AG G LMAL NTYGL+F+++LLG+GLV+VPRKLW++SF ++EL+R YF ++ VD+D+ DAV L + E + + + + EE L +L + ++ T +F +D L +P + T P + L A LH+ L+ AQ++V +K + ++ + ++ + +P+ V + G+ L + W W + R LA+L L+ +WS+V S + LSP+G F+Q G + ++Q A+ VP Y+S+C YRSLF ++FG F+LQG H SL+GPLL+NAQYLIRLQFPL YNFL +LR SS + AF LM+ M VP+LG F++YAP++++VL FT+++GYAR LRLVG HEDL+S ++ + +++GR+L R
Sbjct: 128 WILKVWKGIYWSTFILTWLVLPIVFSYLESGYFTPRDRILDALRDQLRMAFIALVALVGFCIYLVAQRYTLAGA-EGLLMALGNTYGLLFVVVLLGNGLVEVPRKLWKSSFPDQELKRLYFRSSLVDSDLHDAVCVLSDVEAEVSALREQLRQSPPAGEELAL-----ELDACMKILQDTRASFRHRPEDMTLGML-LPRTPFGVNSHPTSGPPPSLAHL----------AGLHARLKKAQLRVQVLKKQRDAVISKVEVIEAVCQGALPYPSDV-KAGDGEGCCAALGAWASHLGTVLAWYWLTTLSHCTLRLLAILGWFLTVCFLWSQVFLGSPYALSPYGA-----FQQAFGTSSPFAIQLAIAVPLAYVSICTYRSLFKFKLFGEFSLQGPHQSLAGPLLVNAQYLIRLQFPLAYNFLLMLRSPSSKQT--------AFRHLMSNMAVVPLLGRGFSVYAPLMMVVLAAFTYFRGYARLLRLVGAYHEDLISGEEQE--EMIQQGRSLARR 609
BLAST of mRNA_H-elongata_contig15258.3472.1 vs. uniprot
Match: A0A835Z6T2_9STRA (LMBR1-like membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6T2_9STRA) HSP 1 Score: 287 bits (735), Expect = 4.240e-82 Identity = 196/510 (38.43%), Postives = 271/510 (53.14%), Query Frame = 1
Query: 1 SRWITRVWFALYWTTFLLAWVVIPILYQSWRRGELTWKERLRSAVRMNIRQYLFMALVLVLFVVYLVGSGKVNAGKVGGFLMALANTYGLVFIILLLGHGLVQVPRKLWETSFNERELQRHYFIATKVDTDMQDAVFDLEEAEDHIDCMEKSMEAEECVLPGDRPQLIG-ILAAIRKTETAFYDEIDDGLLRKASVPLAHENRK-PNDTRTPAEAFRDLGLVILTPRDAAKLHSELRAAQVKVVAMKTKWAKLVRNTDKLQCLLDEIPWGEAVFETAPGKTVVQYLKMVLKRIQNRSWWIWQAYVRWLCCRTLAVLCAVLSAAIVWSEVVGASRWNLSPFGILLWFMFRQEAGIAHALSMQAAVLVPFLYMSLCGYRSLFTLRIFGSFALQGGHHSLSGPLLINAQYLIRLQFPLGYNFLRILRYKSSASSGIPGLQLPAFDMLMTEMKTVPVLGTDFNIYAPMLLLVLCMFTFYKGYARTLRLVGLEHEDLVSLDDPDGNARLEEGRAL 1524
S W++ W +YW+TF+LAWVV+PIL +W GELTW+ R+R+A+++N+ Y MA ++ YL+ G F MA NTYGL+ I+LL+GHG + E R + T V S EA+E +G L AI++T +F G R+++ + ++ K P + + L+ KLHS LR Q +V+A +W LV DK+ C+ I + E P YL+ R+ +W Y R LAV+C LS +VWSE A ++LSPFG L+ + AL++QAAVLVPF+YMS C +RSLF L++FGSFAL G H SL L++NAQYL+RLQFPLGYNF+ +L + A LQ AF+ LM+ M VP+LGTDFNIYAP+L+++LC+FT +GYAR LRLVG+EHEDL + D DG A + AL
Sbjct: 143 SAWVSHAWSTVYWSTFVLAWVVMPILNSAWHAGELTWRARIRAAIKINMLTYAAMAAAGLVATGYLLYKGVATRDTAQAFFMAWGNTYGLMLIVLLMGHG--------------DFERVRGGLVTTPV-----------------------SPEADEAPAKASINVEVGRYLEAIQETIDSFKLAAMGGDRRRSASSCSPDSSKGPKKEKDRGKRNHVSELI--------KLHSRLREGQERVMAAWQRWQDLV---DKVTCVEQII--SRTLPEPQPLPGASNYLRAQGSRVAR----VWLLYAHHHFLRLLAVICLALSVMVVWSECTLAVPYDLSPFGWLI-----EVLDPFGALAVQAAVLVPFIYMSFCTFRSLFKLKLFGSFALNGPHQSLPRQLIMNAQYLVRLQFPLGYNFVTLLGPEGGA------LQRIAFNKLMSNMAVVPLLGTDFNIYAPLLMVLLCLFTACRGYARLLRLVGIEHEDLHTAD-VDGQASMRRSNAL 586
BLAST of mRNA_H-elongata_contig15258.3472.1 vs. uniprot
Match: A0A7S4VB21_9STRA (Hypothetical protein n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VB21_9STRA) HSP 1 Score: 259 bits (662), Expect = 2.540e-71 Identity = 191/543 (35.17%), Postives = 294/543 (54.14%), Query Frame = 1
Query: 22 WFALYWTTFLLAWVVIPILYQSWRRGELTWKERLRSAVRMNIRQYLFMALVLVLFVVYLVGSG-KVNAGKVGGFLMALANTYGLVFIILLLGHGLVQVPRKLWETSFNERELQRHYFIATKVDTDMQDAVFDLEEAEDHIDCMEKSMEAEECVLPGDRPQLIGILAAIRKTETAFYDEIDD-GLLRKASVPLAHE--NRKPNDTRTPAEAFRDLGLVIL-----TPRDAAKLHSELRAAQVKVVAMKTKWAKLVRNTDKLQCLLDEIPWGEAVFETAPGK-------TVVQYLKMVLKRIQNRSWWIWQAYVRWLCCRTLAVLCAVLSAAIVWSEVVGASRWNLSPFGILLWFMFRQEAGIAHALSMQAAVLVPFLYMSLCGYRSLFTLRIFGSFALQGGHHSLSGPLLINAQYLIRLQFPLGYNFLRILRYKSSASSGIPGLQLPAFDMLMTEMKTVPVLGTDFNIYAPMLLLVLCMFTFYKGYARTLRLVGLEHEDLVSLDDPDG-NARLEEGRALLERGKRQAQVVALKSKGERDDQTPN 1599
W YW+TFLLAW+V+PI +S GE T R+++ R + R L + LVL VV ++ G + + V LMAL NTYGL+ + LLLG+GLV +P++LW+ +F E EL+R +A D + DAV++L++ ED ID +++ DR G L++ E + +DD LLR ++ L+ + +R+ N+ R +EA D + T LH+ L+ AQ KV+ + +W +V + L++ + +++PG+ + + + L + + +W+ ++R R +A+ A LS I+W E A +NLSPF + L + G Q A L+P LYMS C Y SLF L FG + L+G S LL NAQYL+RLQFPLGYN+L + +Y S ++ AF LM+ M TVPVLGT F++YAP+L+L LC FT GY R + ++G+EHED + L D + N ++ EG +LL + +R+A +K +D+TP+
Sbjct: 108 WQVTYWSTFLLAWLVLPITRESLLSGEFTAAARVKNGARKSARGILIL---LVLAVVAIIALGIYLRSLHVIPVLMALGNTYGLLLVSLLLGYGLVDLPKQLWKKTFPEDELRRARIMAVGADEALFDAVWELQDYEDLIDGAVEAI---------DR---CGELSSNLINEETYKQYVDDLVLLRNSTAELSPDLQSRRTNNRRRHSEAEDDDPVSTFDGARPTVDYLVHLHARLKLAQEKVIGAQQRWEVIVEQSRFYSNLVEG-----STPQSSPGQNGGEDQQSSLPLMNEQLVPLGTKVQGMWRKHLRNPTYRLMALSTAGLSILILWCEATLAVEYNLSPFNLFL-DLLDGPNGRQKGTLFQIAALIPLLYMSTCVYSSLFKLGTFGPYCLRGNRQSHGVALLFNAQYLVRLQFPLGYNYLLMTKYDISFTNC-------AFSQLMSHMDTVPVLGTSFSVYAPLLILALCGFTLCDGYPRLMAVLGVEHEDAILLSDKETLNGKVNEGISLLRKYERRAGSSRQSTKTN-NDRTPS 621
BLAST of mRNA_H-elongata_contig15258.3472.1 vs. uniprot
Match: A0A7S2XKF6_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XKF6_9STRA) HSP 1 Score: 240 bits (612), Expect = 1.030e-64 Identity = 178/557 (31.96%), Postives = 295/557 (52.96%), Query Frame = 1
Query: 22 WFALYWTTFLLAWVVIPILYQSWRRGELTWKERLRSAVRMNIRQYLFMALVLVLFVVYLVGSGKVNAGKVGGFLMALANTYGLVFIILLLGHGLVQVPRKLWETSFNERELQRHYFIATKVDTDMQDAVFDLEEAEDHIDCMEKSME---AEECVLPGDRPQLIGILAAIRKTETAFYDEIDDGLLRK--ASVPLAHE--NRKPNDTRTPA----EAFRDLGLVIL--------TPRDAAKLHSELRAAQVKVVAMKTKWAKLVRNTDKLQCLLDEIPWGEAVFETAPGKTVVQYLKMVLKRIQNRSWWIWQAYVRWLCCRTLAVLCAVLSAAIVWSEVVGASRWNLSPFGILLWFMFRQEAGIAHALSMQAAVLVPFLYMSLCGYRSLFTLRIFGSFALQGGHHSLSGPLLINAQYLIRLQFPLGYNFLRILRYKSSASSGIPGLQLPAFDMLMTEMKTVPVLGTDFNIYAPMLLLVLCMFTFYKGYARTLRLVGLEHEDLVSLDDPDG-NARLEEGRALLERGKRQAQVVALKSKGERDDQTPNSSPTRRGMWNV 1632
W +YW+TF LAW ++P++ G T RLR+ R +R Y+F++++ ++ VV L + ++ + V LMAL NTYGL+ + +LLG+GLV +PR + + E EL+R +A D + DAV++L++ ED +D +E A++ PG A K E +Y + L+R+ A+ L E NR+ + R + F D+ + T + A+L+++L+ AQ +++M+ +W LV+ + L + + +P +++ + RS W+ Q +R R +A+ A+LS ++WSE NLSPF + L I Q A L+P LYMS C Y SLF L FG + L+G + S+ L+ NAQYL+RLQFPLGYN+L +L+Y +S+++ AF +M++M TVP GT F++YAP++++ LC FT GY R L ++G+EHED + + D + ++ EG LL R + +++ + +S+ + DD + +S + W V
Sbjct: 79 WMYIYWSTFCLAWGILPLVRAVLLSGHFTALSRLRAGCRKALRGYIFLSMISLVAVVVL--AIRLQSFHVMSVLMALGNTYGLLMVAVLLGYGLVDLPRSISRMAKPENELRRARIMAGSADEALFDAVWELQDCEDLVDATIARIERYNAQDEESPGG--------ATASKGEQ-YYTVCVESLVRRRNATANLGSELQNRRTSSNRRSNNRGDDDFEDVHVHAPPYCADDRPTIQHLAELNAKLQRAQATLMSMEQRWNSLVKRSRFYASLAGGDVPDRSTSQASPSPSLLSGSNEGVGGCM-RSMWMRQ--LRGPVYRLMALSMAILSGTVLWSEATIGLDINLSPFALFLEAFGSSSKNIFF----QIAALIPLLYMSACVYSSLFKLSNFGPYCLRGHNQSIGVALVFNAQYLVRLQFPLGYNYLLMLKYDTSSTNC-------AFVHVMSDMSTVPFFGTSFSVYAPLMIIALCCFTLCNGYPRLLAVLGIEHEDAILMGDKETLEGKVNEGITLLRRHEDRSKDSSRRSEFK-DDSSHSSDSQKSDSWWV 609
BLAST of mRNA_H-elongata_contig15258.3472.1 vs. uniprot
Match: K0R7D7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R7D7_THAOC) HSP 1 Score: 225 bits (574), Expect = 5.610e-59 Identity = 179/552 (32.43%), Postives = 281/552 (50.91%), Query Frame = 1
Query: 22 WFALYWTTFLLAWVVIPILYQSWRRGELTWKERLRSAVRMNIRQYLFMALVLVLFVVYLVGSGKVNAGKVGGF----LMALANTYGLVFIILLLGHGLVQVPRKLWETSFNERELQRHYFIATKVDTDMQDAVFDLEEAEDHID-----CMEKSMEAEECVLPGDRPQLIGILAAIRKTE---------TAFYDEIDDGLLRK-ASVPLAHENR-KPNDTRTPAEAFRDLGLVIL---TPRDA--------AKLHSELRAAQVKVVAMKTKWAKLVRNTDKLQCLLD-EIPW-GEAVFETAPGKTVVQYLKMVLKRIQNRSWW---------IWQAYVRWLCCRTLAVLCAVLSAAIVWSEVVGASRWNLSPFGILLWFMFRQEAGIAHALSMQAAVLVPFLYMSLCGYRSLFTLRIFGSFALQGGHHSLSGPLLINAQYLIRLQFPLGYNFLRILRYKSSASSGIPGLQLPAFDMLMTEMKTVPVLGTDFNIYAPMLLLVLCMFTFYKGYARTLRLVGLEHEDLVSLDDPDGNARLE-EGRALLERGKRQA 1548
W YWTTF LAW+++PI QS G+ T +R++ V +I+ + M + V+ V+ V + K+ + LMAL NTYGLV + LLLG+GLV +P++ W + L+R IA+ ++ + ++V LE+ ED I+ ++ +E ++ + +L + R T T F+ ++ + RK ++ L E R + ND+ T TP + L S+L AQ V + + +W L+ ++ L+D E+ G AV + G + +L N +W Y+R+ R +A++ AVLS ++ SEV S+ NLSPF L+ + + + +H + Q A LVP LYMSL Y SLF +IFGS++L+G S LL NAQYL+RLQFPLGYN+L +L+Y S AF +M +M T+P LG F++YAP+L+L +C+FT Y R L+ +G+EHED + + D D A+ E +G L++R + A
Sbjct: 89 WKVTYWTTFFLAWIILPITRQSLTSGQFTRYQRIKDGVSKSIKGIVLMMIAGVVTVI--VSAVKLRTWHIVTIVMPALMALGNTYGLVLVALLLGNGLVNIPKRFWREACPSSVLRRSRIIASHIEESLFESVMQLEDIEDKIEEVCAMAVQLDEGGDEGLMRNEDGELTLRGQSKRATRCSCCGVDEVTEFHGCLEVLVRRKNETINLCAERRTRRNDSPTRGHXXXXXXXXXXDGDTPEEVNTMDINYLLSLSSKLMDAQENVNSAQLRWDTLMEHSRLFSALMDGEVATTGGAVGDRGQGSDGSN--ENLLSPSSNHGSCGKVCYMLRRVWVRYLRFPTYRVVAMITAVLSVFVLMSEVTLGSKMNLSPFSWLVHGIEKTDQS-SHQIPFQIAALVPLLYMSLSLYSSLF--QIFGSYSLRGNRQSHGVALLFNAQYLVRLQFPLGYNYLLMLKYDLSHC---------AFGAIMDDMSTIPFLGASFSVYAPLLILAVCLFTLCDVYPRLLKFLGIEHEDALLVGDADELAQKENDGIQLMKRHSKSA 624
BLAST of mRNA_H-elongata_contig15258.3472.1 vs. uniprot
Match: A0A7S2WQ09_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WQ09_9STRA) HSP 1 Score: 220 bits (561), Expect = 1.990e-57 Identity = 177/547 (32.36%), Postives = 259/547 (47.35%), Query Frame = 1
Query: 1 SRWITRVWFALYWTTFLLAWVVIPILYQSWRRGELTWKERLRSAVRMNIRQYLFMALVLVLFVVYLVGSGKVNAGKVGGFLMALANTYGLVFIILLLGHGLVQVPRKLWETSFNERELQRHYFIATKVDTDMQDAVFDLEEAEDHIDCMEKSMEAEECVLPGDRPQLIGILAAIRKTETAFYDEIDDGLLRKASVPLAHENRKPNDTRTPAEAFRDLGLVILTPRDAAKLHSELRAAQVKVVAMKTKWAKLVRNTDKLQCLLDEIPWGEAVFETAPGKTVVQYLKMVLKRIQNRSWWIWQAYV---RWLCCRTLAVLCAVLSAAIVWSEVVGASRWNLSPFGILLWFMFRQEAGIAHA----LSMQAAVLVPFLYMSLCGYRSLFTLRIFGSFALQGGHHSLSGPLLINAQYLIRLQFPLGYNFLRILRYKSSASSGIPGLQLPAFDMLMTEMKTVPVLGTDFNIYAPMLLLVLCMFTFYKGYARTLRLVGLEHEDLVSLDDPDGNARLEEGRALLERGKRQAQVVALKSKGERDDQTPNSSPTRRG 1620
SR ++ W +YW+TF LAW+V+P++Y++W GE TW+ R +A+R N++ + ++ +FV+YLV +G V + F M NTYGL+ ++ LLG+GLV+VPR LW S L+R F A DTD+ D D+E+ +E + G G+ K A EI + LR+ S H R T + L ++++ R A++ + + KL D+ L E E+ E + L K +Q + R L + LS IVWSE+ NLSP+ +LL + + L Q VLVP+LYMS C + SLF LR+ G +LQ H S G LL NA YLIRLQFPLGY +L +L ++ + AF LM+ M T P+LG F +Y P+LL++LC ++ Y R L VG+E E + DG R++EGR LL R ++ A A G+ D+ +P R G
Sbjct: 95 SRLLSTSWSVVYWSTFCLAWLVLPVVYEAWYAGEPTWRGRFLAALRANLKYCIASTVLGFIFVLYLVATGNVTLEGIPSFFMLFGNTYGLLIVVALLGNGLVEVPRALWRQSTPSDRLERLLFCAAVCDTDVYDCKCDVEDI------------LKEATIAGAASSETGV-----KGTAAEVIEICEDTLRELSQEY-HIRRSTGRHDTLEDRSEGHLLAEQETPQQGRMYALHRRAKMACESCRAAKMKL----DRFFALAIE---HESRMEASEESDTASRLPRPSK---------YQMLIGGSRVLAAKGACFAAIALSTMIVWSELTCGLPVNLSPWSLLLGTIASSANDRPESQPLVLIHQLLVLVPYLYMSGCCFYSLFQLRLSGFLSLQSPHQSAPGALLFNAIYLIRLQFPLGYTYLTMLSPPNTHGDRLA--DDVAFQHLMSGMDTFPILGQQFVVYMPVLLVLLCASSYVNLYPRLLASVGIEQE---AYGFSDGEDRIQEGRQLLRRHRKHAMAAA----GDTSDEE-TRAPARHG 597
BLAST of mRNA_H-elongata_contig15258.3472.1 vs. uniprot
Match: B8CB15_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB15_THAPS) HSP 1 Score: 218 bits (554), Expect = 2.550e-56 Identity = 163/544 (29.96%), Postives = 264/544 (48.53%), Query Frame = 1
Query: 22 WFALYWTTFLLAWVVIPILYQSWRRGELTWKERLRSAVRMNIRQYLFM----ALVLVLFVVYLVGSGKVNAGKVGGFLMALANTYGLVFIILLLGHGLVQVPRKLWETSFNERELQRHYFIATKVDTDMQDAVFDLEEAEDHIDCMEKSMEAEECVLPGDRPQLIGI---------------------LAAIRKTE-TAFYDEIDDGLLRK-ASVPLAHENRKPNDTRTPAEAFRDLGLVI--LTPRDAAKLHSELRAAQVKVVAMKTKWAKLVRNTDKLQCLLDEIPWGEAVFETAPGKTVVQYLKMVL----------KRIQNRSWWIWQAYVRWLCCRTLAVLCAVLSAAIVWSEVVGASRWNLSPFGILLWFMFRQEAGIAHALSMQAAVLVPFLYMSLCGYRSLFTLRIFGSFALQGGHHSLSGPLLINAQYLIRLQFPLGYNFLRILRYKSSASSGIPGLQLPAFDMLMTEMKTVPVLGTDFNIYAPMLLLVLCMFTFYKGYARTLRLVGLEHEDLVSLDDPDG-NARLEEGRALLER 1533
W YWTTF+LAW+++PI +S G + ++R + V +IR + M + ++ ++L V V LMAL NTYGLV + +LLG+GLV +P++ W + EL+R +A + ++ +A+ +LE+ E+ I+ E A G + +G+ L R E T F++ +++ + RK ++ L + R + D G + L L++ L+ AQ +V + + +W L+ ++ L+D+ EA+ T+ +IQ +W ++R+ R +A++ AVLSA ++ SEV A NLSPF L + H + Q A L+P LYMS+C Y LF + S+ L+G S L+ NAQYL+RLQFPLGYN+L +L+Y + AF +M++M T+P GT F++YAP+L+L +C FT Y + L G EHED + L D D +++ EG L++R
Sbjct: 95 WQITYWTTFILAWLILPITRESLLSGHFSLQQRFKDGVAKSIRGIMIMICMGTVTIIGMAIHLKSVRLVTT--VLPVLMALGNTYGLVLVAVLLGNGLVNIPKRFWREACPANELRRVRIMACGAEEELFEAIMNLEDVEERIE--EVCANAINLREDGGGGEAVGMMENEDGGISLRTRRGRARRCGLCCCRVDEVTQFHESLEELVRRKNETLELNSDRRTRRGNASSRNRDNDEGNAVHTLDLNYLVSLNAHLKRAQERVTSAQLRWNHLMDHSRLFASLMDDES-DEALTGTSXXXXXXXXXXXXXXXXXXXXXXNNKIQYTLQKLWVQHLRYHAYRIIAIVTAVLSAFVLLSEVTLAVPLNLSPFSWTL-HALDNSSDSTHQILFQIAALIPLLYMSICVYTCLFQMSSLSSYCLRGNRQSHGVALIFNAQYLVRLQFPLGYNYLLMLKYDMTHC---------AFSAIMSDMSTIPFFGTSFSVYAPLLILAVCGFTLCDAYPKILHFFGFEHEDALLLGDEDVLESKVNEGIQLMKR 623
BLAST of mRNA_H-elongata_contig15258.3472.1 vs. uniprot
Match: A0A7S0TIF6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S0TIF6_9STRA) HSP 1 Score: 214 bits (544), Expect = 4.150e-55 Identity = 165/557 (29.62%), Postives = 271/557 (48.65%), Query Frame = 1
Query: 22 WFALYWTTFLLAWVVIPILYQSWRRGELTWKERLRSAVRMNIRQYLFMA----LVLVLFVVYLVGSGKVNAGKVGGFLMALANTYGLVFIILLLGHGLVQVPRKLWETSFNERELQRHYFIATKVDTDMQDAVFDLEEAEDHID--C-----MEKSMEAEECVLPGDRPQL-IGILAAIRKTE-----------TAFYDEIDDGLLRK-ASVPLAHENRKPNDTRTPAEAFRDLGLVILTPRDAAK-------------LHSELRAAQVKVVAMKTKWAKLVRNTDKLQCLLDEIPWGEA---------------VFETAPGKTVVQYLKMVLKRIQNRSWWIWQAYVRWLCCRTLAVLCAVLSAAIVWSEVVGASRWNLSPFGILLWFMFRQEAGIAHALSMQAAVLVPFLYMSLCGYRSLFTLRIFGSFALQGGHHSLSGPLLINAQYLIRLQFPLGYNFLRILRYKSSASSGIPGLQLPAFDMLMTEMKTVPVLGTDFNIYAPMLLLVLCMFTFYKGYARTLRLVGLEHEDLVSL-DDPDGNARLEEGRALLER 1533
W YWTTFLLAW+++PI ++ G T +R+R+ +I+ L M + ++ ++L V V LMAL NTYGLV + LLLG+GLV VP++ W + EL+R IA V+ ++ D++ LE+ ED I+ C + +S + ++ + + +G + R+ T F++ +++ + RK L E R + D A L+++L+ AQ +V++ + +W +LV + + L+++ G + ++ + +K +L+R W ++R+ R +A+ AVLS ++ SEV AS NLSPF L Q G + + Q A L+P LYMS+C Y LF + + G + L+G S L+ NAQYL+RLQFPLGYN+L +L+Y S AF +M++M T+P GT F++YAP+L+L++C + + Y + L +G+EHED + L D D ++ EG L+ R
Sbjct: 103 WKITYWTTFLLAWLILPITRETLLSGHFTLLQRIRNGFTKSIKAILLMNVCGFIAVIAMAIHLKSVHLVTI--VLPVLMALGNTYGLVLVSLLLGNGLVNVPKRFWREACPANELRRIRMIACGVEEELFDSIMALEDVEDKIEEVCATAVNLRESGDENVTMMENEEGGVSLGTTTSRRRRGCWSLCWKADQVTQFHECLEELVRRKNEGRELCSERRTRRGGNSGTXXXXXXXXXXXXXXDDAAETINTMDVKYLVTLNTQLKKAQERVISAELRWNELVDHNRIVSALMNDDDTGSVASGQDGNDGAYNSNLLSSSSSSSSGCHRVKYILQRF-------WMRHLRYHTYRFIALTTAVLSVFVLLSEVTLASSLNLSPFSWTL-AALDQWGGSSSQILFQLAALIPLLYMSICVYTCLFQMSLLGPYCLRGNRQSNGVALVRNAQYLVRLQFPLGYNYLLMLKYDMSNC---------AFSDIMSDMATIPFFGTSFSVYAPLLILLVCALSLFDCYPKMLHWLGIEHEDALLLGDQEDLECKVNEGIQLMTR 640 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15258.3472.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig15258.3472.1 >prot_H-elongata_contig15258.3472.1 ID=prot_H-elongata_contig15258.3472.1|Name=mRNA_H-elongata_contig15258.3472.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=568bp SRWITRVWFALYWTTFLLAWVVIPILYQSWRRGELTWKERLRSAVRMNIRback to top mRNA from alignment at H-elongata_contig15258:138..7532- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig15258.3472.1 ID=mRNA_H-elongata_contig15258.3472.1|Name=mRNA_H-elongata_contig15258.3472.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7395bp|location=Sequence derived from alignment at H-elongata_contig15258:138..7532- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig15258:138..7532- >mRNA_H-elongata_contig15258.3472.1 ID=mRNA_H-elongata_contig15258.3472.1|Name=mRNA_H-elongata_contig15258.3472.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3408bp|location=Sequence derived from alignment at H-elongata_contig15258:138..7532- (Himanthalia elongata Himel1 dioecious)back to top |